Hrub013127.1
Basic Information
- Insect
- Halictus rubicundus
- Gene Symbol
- cnc
- Assembly
- GCA_028454235.1
- Location
- CM052174.1:180663-188636[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-16 1.2e-13 50.8 5.2 3 65 288 350 286 350 0.97
Sequence Information
- Coding Sequence
- ATGCGTATGTTGGACAATGCCAGCAACAACGCTTCTGGTCCAACGGGAGCAACGGCCTTGTCGGCAGTTCAGACAACTGGCGGTACGAACTCTTCAACAACAGGTGTTACAACACTTCCGGGTGTAACAGACGAAAGAATGGATGCATCAAGCGATAGCGCAGTTAGTAGCATGGGCAGCGAACGAGTACCATCCCTCTCGGATGGCGAATGGATGGAAACTGGATCTAATTCTAGCCACACGCAGGCTGATTCTCATTACTCTATGGACTATGCCAGCAAATACCGAATGTCCTACGACTGCAGCTACTCCGTTTCCGGGCGAAATGGCGGATCTCCAAGATGTCAAACGGAACGCAGTATGCCCCCGGTTGCCCAGAAGAAACATCAAATGTTTGCAAAACGATATTTCCAAGAACAAGGTACAGGTTCGCCACTCGGAACCACAGCACACCCGACTACCCCAATGAAATACGAATACGACACGCATACAGTTGGTGCTGGAGCACCAGGAAACGCGTATTCGGGACCAATCGAGGGTGCAGCTGGACCACAACCCGAAATGAAGTACAGCTGCAGCTTAGACTTCAGTCGACATCAATCAGGACGTTCTGCTATTGAGCACATTCACCATAATCACACGTATCATTTACCTGCGGAAAGTTCCGGATCCCTTCAACGTCCAGTTTCTCGTGATAAAAAAGTACGTAAAAGCGAAGGCGAAGAGCACCTGACTAGAGACGAGAAAAGGGCCAGGGCATTGAACGTGCCGATTCCAGTGAATGACATTATTAATCTACCTATGGACGAATTCAATGAACGTCTTAGTAAATACGATCTCAGCGAAGCTCAATTGTCTTTGATACGTGACATAAGACGACGGGGCAAGAATAAAGTTGCTGCTCAAAATTGCCGCAAACGTAAACTAGACCAAATTATTAGCCTTGCCGATGAAGTGAAGGAAATGAGAGACCGTAAAATGAGACTTATTCGTGAACACGAGTTCATGCTTCTCGAGAGGCAACGTGTGAAGGACAAATTTAGCCAACTTTACCGTCATGTATTTCAATCTTTACGGGACCCTGATGGGAATCAATATCACCCATATGAGTACAGCCTTCAACAGTCTGCAGATGGGAATGTATTGTTAGTGCCAAGAAATCAGACAAATCCTCATCACTCGCGTTCCACAACAATGGAACCAAAAACGAAACCCAATCCGGAGCATAAAGAATGA
- Protein Sequence
- MRMLDNASNNASGPTGATALSAVQTTGGTNSSTTGVTTLPGVTDERMDASSDSAVSSMGSERVPSLSDGEWMETGSNSSHTQADSHYSMDYASKYRMSYDCSYSVSGRNGGSPRCQTERSMPPVAQKKHQMFAKRYFQEQGTGSPLGTTAHPTTPMKYEYDTHTVGAGAPGNAYSGPIEGAAGPQPEMKYSCSLDFSRHQSGRSAIEHIHHNHTYHLPAESSGSLQRPVSRDKKVRKSEGEEHLTRDEKRARALNVPIPVNDIINLPMDEFNERLSKYDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQIISLADEVKEMRDRKMRLIREHEFMLLERQRVKDKFSQLYRHVFQSLRDPDGNQYHPYEYSLQQSADGNVLLVPRNQTNPHHSRSTTMEPKTKPNPEHKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00302785;
- 90% Identity
- iTF_00961578;
- 80% Identity
- -