Basic Information

Insect: Habrosyne pyritoides
Gene Symbol: B0310.2
Assembly: GCA_907165245.1
Location: OU015615.1:5004210-5026561[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.032 2.4 9.2 1.0 1 23 364 386 364 386 0.95

2 11 0.027 2 9.5 0.8 1 23 393 416 393 416 0.93

3 11 0.4 29 5.8 0.2 1 23 420 442 420 442 0.92

4 11 0.0044 0.32 11.9 1.0 1 23 447 470 447 470 0.98

5 11 0.0029 0.22 12.5 0.7 1 23 474 497 474 497 0.96

6 11 1.6 1.2e+02 3.9 0.1 2 21 510 529 510 530 0.85

7 11 0.14 10 7.2 0.1 2 23 587 609 586 609 0.96

8 11 0.0098 0.73 10.8 0.5 2 20 625 643 624 646 0.92

9 11 3.2e-05 0.0024 18.7 3.1 1 23 652 674 652 674 0.99

10 11 0.00025 0.018 15.9 2.8 1 23 681 703 681 703 0.98

11 11 0.00011 0.0084 16.9 2.2 1 23 709 732 709 732 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.032	2.4	9.2	1.0	1	23	364	386	364	386	0.95
2	11	0.027	2	9.5	0.8	1	23	393	416	393	416	0.93
3	11	0.4	29	5.8	0.2	1	23	420	442	420	442	0.92
4	11	0.0044	0.32	11.9	1.0	1	23	447	470	447	470	0.98
5	11	0.0029	0.22	12.5	0.7	1	23	474	497	474	497	0.96
6	11	1.6	1.2e+02	3.9	0.1	2	21	510	529	510	530	0.85
7	11	0.14	10	7.2	0.1	2	23	587	609	586	609	0.96
8	11	0.0098	0.73	10.8	0.5	2	20	625	643	624	646	0.92
9	11	3.2e-05	0.0024	18.7	3.1	1	23	652	674	652	674	0.99
10	11	0.00025	0.018	15.9	2.8	1	23	681	703	681	703	0.98
11	11	0.00011	0.0084	16.9	2.2	1	23	709	732	709	732	0.93

Sequence Information

Coding Sequence: ATGAGGTGCAGCGTTCAAAATTGTACAAATGACACAAGGCGAACAACTAAAAGCCATGGAATCACGTTTCACATGTTCCCAAAAGAACCAAATCTCAGAACGGAATGGGTGCAAGCCCTGGGCATGGCGCACTGGGAGCCTAAGGATAGAAGTACTATCTGCTCCGAGCACTTTCGCAATGAAGACTTCTATGAGACCAAGTGTGGACTGCGGAAGATAAGGAAGACTGCAGTGCCTGTTGTGTCTCAGGACTCCGCTGAAGACCTGGACGCTCCTGCGACATTGAGGGTATGCAGAATATGCTTAGCGATGGACATGAAAATGTACAATATAAGAGAGTACAAACTGGAGCACACGTATCAACAGATCACTGGAGTAGAGATAAGAGAGGAAGATAGATTACCACAGAAGTTATGCTGGGAGTGCGGACACAGACTGGCTTCAGTGTCTCGCTTCAGGAGCAAGGCTCTCCGCAGCCACGCGCTCATGCTGGACATGGTGCACGGCGGACGATACATAACCGTTCGAGATATAAAATCAGTAAACCGTACACACAACGAAATAAAGTCCAATTTAATGCTAAAAATATATGAACCAAACGATTGTGACATGGAAGTCATAGACGATCGAGTGTGTGTGAAATCTGAAAACGACAGAGTGATGGATTCGGACTCACTAATAGACTTAGAAGATGAGTTCAAAATGGAATCTAATATGTCAAGAATGGGCGTAGAAGTAGTCGAAGTTAAAGATGAAAGCAACGAGATATATTTTGACGAATTCGTAGATGATATAGAGGATACAGATGATGATAAAAAGCTCAGTGAAGTGTTTGTAAAACCAAAGACTAAAGTTAAGAAGAAAAAGTTGAAGATTGTTAAGGAGGTTAAAGTTAAGGCGCCTAAGAAGAAAGAGGAAGTGGATAGTCCCTCTATTACTATGGATAGATATAAAAAAAACGATGTTAAACGAAGAAAAACGAATGACGGTCTCGATGAGACGCTCTTCACAATTACAACGCTCACTTACGAAGAGCAAATATCAGAGATACAGAAACGGCAAGAGACTGTCAATTACAAAAATTCACTATACAAGTGTACTATTTGTTATAGATCTTTCCAAATCAAGGATCGATACGATGCTCATATTGTAAGACATAGTGAGGCGAGCGGTGCGTACGAGTGTTTTATATGCAAAACTCGATTGAAAACTGGCCGCGCTCTGAGAAAGCATTTGACGGCGCAACACACTGAGAAATTCAGTTGTAAAGGATGTCCGTTTGTCACTAGAAATAGGGGTGTAGCGAGGGAACATGAGAAATGGCATGCCGGCACCAAGTACCAATGTCCACACTGTCCCAGTGAGTTCGACAAACTGACAACGTACATGGGCCACATCCGCATCAAGCACGTGTCGGACTTCGTGTGCGAGCTGTGCGGGTACACGTTCGTGAGCAAGAAGGGCATCGACGTGCACAAGAAGAAGAAGCACAGGCTTGCCGACAAGGCGGTAAATATTGACGGTCCGTACTGCGAAGTGTGTGATGTACGATTTGTATCAGAAGAGGCGCACTCTAGGCATCTCAAGCTCTCGTCGCGACATAGCAGTGATACTGATCCTAACCGCATAAGGAATGATTCTCAAAGCATGAACGCGGAGAGAAATGGCAGAGTAATGAGGAAGATAGAACGCAGGCCTGTCATACATCCCAGAGAACCGAACGACCCCAACAAGAAGCTGGACCAAAGTGGACCAGTGCCCTGTGAACAGTGCGGTATACAACTGCGCGACCTGCGACTGTACGCGCAGCACTTTAGAAGGGCTCACCCGGACAAGAATCGAACCAAGTACCCCGCGATGAAGACGCCGTGTATGTGTGAGCAGTGCGGACGTATATTCCAGAGCATGGCCCTCCTTAAGGATCACATGTGGGTCCACACAGGCGAGAAGCGGTTTAAATGCGACCGCTGCACGAAAAGCTTCACGCAGAAAACGAACCTCGTGTTCCACATGCGCGTGCACAGCTCCCAGCGCCCTTCCTACGAGTGTCCACTCTGCGGAAAGCACTTCGCCTTCTTCAATAACAGGCGACGGCACATGTTTATCCACACGGGGCTGAAGCCGTTCAAGTGCGAGACGTGCGGCAAGTGCTTCACGACGGCGGGCGAGCAGCGCGCGCACGTGGAGCACGTGCACCTCAAGAAGCCCTGGCCCAAGCGCGCCCGCCAGCGCCACCTCGACCTGGGCCCCGGCGCCGGGCCCGGGGGCGCCGCCGGGCCCGGGGACGCCGCCGGGCCCGGGGACCCCACCGGGGACTGGTGCATCAAGTGCGTCGAGGACTAG
Protein Sequence: MRCSVQNCTNDTRRTTKSHGITFHMFPKEPNLRTEWVQALGMAHWEPKDRSTICSEHFRNEDFYETKCGLRKIRKTAVPVVSQDSAEDLDAPATLRVCRICLAMDMKMYNIREYKLEHTYQQITGVEIREEDRLPQKLCWECGHRLASVSRFRSKALRSHALMLDMVHGGRYITVRDIKSVNRTHNEIKSNLMLKIYEPNDCDMEVIDDRVCVKSENDRVMDSDSLIDLEDEFKMESNMSRMGVEVVEVKDESNEIYFDEFVDDIEDTDDDKKLSEVFVKPKTKVKKKKLKIVKEVKVKAPKKKEEVDSPSITMDRYKKNDVKRRKTNDGLDETLFTITTLTYEEQISEIQKRQETVNYKNSLYKCTICYRSFQIKDRYDAHIVRHSEASGAYECFICKTRLKTGRALRKHLTAQHTEKFSCKGCPFVTRNRGVAREHEKWHAGTKYQCPHCPSEFDKLTTYMGHIRIKHVSDFVCELCGYTFVSKKGIDVHKKKKHRLADKAVNIDGPYCEVCDVRFVSEEAHSRHLKLSSRHSSDTDPNRIRNDSQSMNAERNGRVMRKIERRPVIHPREPNDPNKKLDQSGPVPCEQCGIQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRIFQSMALLKDHMWVHTGEKRFKCDRCTKSFTQKTNLVFHMRVHSSQRPSYECPLCGKHFAFFNNRRRHMFIHTGLKPFKCETCGKCFTTAGEQRAHVEHVHLKKPWPKRARQRHLDLGPGAGPGGAAGPGDAAGPGDPTGDWCIKCVED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01417220;
90% Identity: iTF_00761743;
80% Identity: iTF_00761743;