Hpyr016661.1
Basic Information
- Insect
- Habrosyne pyritoides
- Gene Symbol
- -
- Assembly
- GCA_907165245.1
- Location
- OU015615.1:5835145-5843622[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00056 0.042 14.7 1.6 1 23 336 359 336 359 0.95 2 11 0.0011 0.08 13.9 2.3 2 23 367 388 366 388 0.97 3 11 0.019 1.4 9.9 2.4 1 23 392 414 392 414 0.98 4 11 0.00013 0.0097 16.7 1.6 1 23 419 441 419 442 0.95 5 11 0.075 5.6 8.1 0.0 3 23 449 470 449 470 0.97 6 11 0.059 4.4 8.4 0.7 2 23 480 501 479 501 0.92 7 11 0.0014 0.1 13.5 0.3 2 23 512 534 511 534 0.95 8 11 3.3e-05 0.0024 18.6 4.5 1 23 540 563 540 563 0.97 9 11 0.0051 0.38 11.7 2.2 2 23 577 598 576 598 0.96 10 11 4.1e-05 0.003 18.3 4.9 1 23 604 626 604 626 0.98 11 11 4.3e-05 0.0032 18.3 0.2 1 20 632 651 632 653 0.93
Sequence Information
- Coding Sequence
- ATGTGTTCATTTCTCTCTGAAAATGAAGTGAAAATAGAATTATTAGCTTGTCGCGGCTGCCTCTCGACCAACGTGAAGTTATACAACATGTTTCAGTATAAACTAACTGATATTTACTCTGAAATTATTGGAGTTACAGCCCAAGATTCAAGTCTACCACACCATCTGTGCCACATCTGCAGCACATTGCTCCTCAAATACTCAAGTTTCCGCATCCAATGTAGAAACTCGGAGAAATTACTTGATGAGGCGACGGTGAAGAATAAAGTGATAACAACAGAAACAATCGACAGCTTAAACCGAAAACTAAAACAACACAAACTTCACAAATCACCAACTCAAACATCAGAATTCCTGCAAGATAATAACAAATATACATTTGAAATAGATATAGAACCAGCGGACGATATCAAAGGTGAAGTTAATGAAGAAATAAATGTGAAAAATGAACTGAGTGACTCTGATAGTGACAACAAAGTGATAGAAGAGGTGCTGTTAATTGATGAACCTGTAAAAAAACAAGAGTTTATAAGTAATAGAACTAGAAAAAAAACAAAACTAGACACAATTAGATATAGATCTATAAAACCTAAAGTCAGCCCTAAACCTATAGTCATTAAGAGTCAAAGTAAAACTGACAAAACAAGAGCTAAATCAAAAGAGACATTTAAAACGAAGGAAAAGAAAAAGTTGATGGTGAAAAGAAAAGTTTGTGATGATGAATTTAAAAGAAAAGGTAAGTCACATTTAAACAGCTTAGTGGATTCTCATGGGCTAGTTGGCTTGGAGGTTAAAGACCCTGACTCCCATGCCAGAGGTCTTGAGTTTCATTCCCACCCAGGACAAACATTTGTGCGCGAACAAGTCTGTAAGAAATTTGAAACAAAAGAAAATATGGCGGATTTTGAAAAAGTATACAACGTTGAAATACAAGTGCTAACACGTGACCAGCAAATGGACGATGTCAATGACAGAAAGAACTCTGTTAACTACCTGACTGGGCCGTACAGATGTGATCAATGCTACAAAGGTTATATGAACGAGGACAATTTAAAAAAACATTACAGTCTACAACATGATCCGAGCAAAGGTGACGTCGTCTGTGAATTCTGTCGCTTCAGATATAAAGATAAGCGAAGTCTCACACAGCATCAAAAAAGTCACAGACTTAAATTCATCTGTAAGCAATGTAAATATGTCTCAAGAACCACTTACAACGCAAAAGAACACTACAAGATGCATAGCGGTCGCATGTATGATTGCAAATATTGTGGGAAAGCATACGAGAAGTTGACCAGCTACCTGGGTCACATGCGAGTGCACCATCCAGACGAGCTGATGTGGTGTGAGGTGTGTGGGGAACCCTTCGTGGGGGAGTTTGGACTCAATGGACACAAGAAACGGGCACACAGAGACTTAAAACTCCCTCCATCATGTAAGTGTGAGCGATGCGACACACAGTTTATGAATGCGCCGGCCCTCGCGACACACGAGACCCTGCACGGAGACAATTGCCAAGACGCCACGTCGGTACCCTGTGTACACTGCGGCCAGTCTCGTGACACTCCGACACTGCTCAGGGTGCACATGCTCAAAGAACATATCATACGGAAGCCGTTTCATTGCGAGAAGTGCAACAAATCATTTACCCGCGAGTCGTTATACAGCGCTCACTATAGAAGGATGCATGTCGAAGCTAAACTTCGCCCGCGGAAGGATACACCCTGTGTTTGCGAAGTTTGTGGAAAGACTTTACCCAACAAATGTGTCCTTGCATATCACCAAAGAAATCATACTGGAGAGAGACCGTATCCATGTCTGCAGTGCCATAAGAGCTTTACGATGCATAAGTTGCTTCAGTCTCACATGAGAGTCCACACAACAGAGCGCCCTTATGTATGTAAACACTGCCCTAAAACTTTCAAAGGGCCGTCAGCATTGAGGGGACACGAACAGGTATGGATTATCTACTATCAAGCCACAGGTCGCTGGTTCGATTCCTAG
- Protein Sequence
- MCSFLSENEVKIELLACRGCLSTNVKLYNMFQYKLTDIYSEIIGVTAQDSSLPHHLCHICSTLLLKYSSFRIQCRNSEKLLDEATVKNKVITTETIDSLNRKLKQHKLHKSPTQTSEFLQDNNKYTFEIDIEPADDIKGEVNEEINVKNELSDSDSDNKVIEEVLLIDEPVKKQEFISNRTRKKTKLDTIRYRSIKPKVSPKPIVIKSQSKTDKTRAKSKETFKTKEKKKLMVKRKVCDDEFKRKGKSHLNSLVDSHGLVGLEVKDPDSHARGLEFHSHPGQTFVREQVCKKFETKENMADFEKVYNVEIQVLTRDQQMDDVNDRKNSVNYLTGPYRCDQCYKGYMNEDNLKKHYSLQHDPSKGDVVCEFCRFRYKDKRSLTQHQKSHRLKFICKQCKYVSRTTYNAKEHYKMHSGRMYDCKYCGKAYEKLTSYLGHMRVHHPDELMWCEVCGEPFVGEFGLNGHKKRAHRDLKLPPSCKCERCDTQFMNAPALATHETLHGDNCQDATSVPCVHCGQSRDTPTLLRVHMLKEHIIRKPFHCEKCNKSFTRESLYSAHYRRMHVEAKLRPRKDTPCVCEVCGKTLPNKCVLAYHQRNHTGERPYPCLQCHKSFTMHKLLQSHMRVHTTERPYVCKHCPKTFKGPSALRGHEQVWIIYYQATGRWFDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -