Hpyr001934.1
Basic Information
- Insect
- Habrosyne pyritoides
- Gene Symbol
- -
- Assembly
- GCA_907165245.1
- Location
- OU015614.1:5970600-5980667[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.06 4.5 8.4 0.4 3 23 132 152 130 152 0.96 2 15 0.26 19 6.4 2.4 1 23 255 277 255 277 0.98 3 15 5.4e-06 0.0004 21.1 1.1 1 23 283 306 283 306 0.97 4 15 0.0099 0.73 10.8 5.6 1 23 311 334 311 334 0.93 5 15 0.00014 0.01 16.7 0.7 2 23 505 526 504 526 0.97 6 15 7.6e-05 0.0056 17.5 2.4 1 23 532 554 532 554 0.98 7 15 1.3 98 4.1 6.6 1 23 626 648 626 648 0.96 8 15 0.032 2.4 9.2 0.4 2 23 656 677 655 677 0.97 9 15 0.017 1.3 10.1 4.8 1 23 683 705 683 705 0.95 10 15 0.00059 0.043 14.7 1.3 1 23 711 733 711 733 0.97 11 15 0.00087 0.064 14.2 2.1 1 23 742 764 742 764 0.98 12 15 0.00013 0.0094 16.8 0.6 2 23 811 832 811 832 0.97 13 15 0.00038 0.028 15.3 3.5 1 23 849 871 849 871 0.96 14 15 2.5e-06 0.00019 22.1 0.7 1 23 877 899 877 899 0.98 15 15 5.4e-07 4e-05 24.3 3.1 1 23 905 928 905 928 0.98
Sequence Information
- Coding Sequence
- ATGAATAACCTAACAGTAGATGTGGACCCCCTGAGTAGCTTTGAGTACCCCCAATACAACCAGTATCCAAACAATGACTTCTCCTACGATTTGAAAGCAGAAGAACCAAATATCATGTACAAGTATGAAATGTTTCCTATCAGCCAAGCAAGTGAGCGGGATGAAAACAATGATACAAACAAAAATAATAAACCAAGTACACATTTACCGAATAATGAAGCAAAAAATCCCAAAAAGAATGATGGAACAGCACCGGACCAACCTCACAATCCAGAAGAAGAGGATGTGAAGCCTATAATTGATGGGAGAAAGGTTAAAAAGGAACGTATCAAAGGTAGAACAAGCAGTTACTGGTCAGTAAAGATAGCTGATAAGGATTTTGCATTCTACGGATGTGCTGTCTGTAATCTACAGTTCAAATCGTTGCATGAGTTAGATCAGCATGTAACAATACACAAAGATAGAATAACAAGCTACGATTTGAGGTTAAAGAATCAAATGTTAAAGAAAAGTAAAAATAAAGGGAAGAAGCTGAAGAAAGTTAAAGAAGAAGTCATTACTAAATTGGAGATTGAGATTAAGCCAGAAGATGGTTATATAGGGGAAGAAAAAGCAGCAGATTTTGAGAAGAAAACAGAGAACACAGAAGGGAGTATAGGTACAGGTGATAACCAAGATTCCAAGTGCGATGATAAGAAGGATTTAAAAAATATTAATATTAACTGTTCTGAGAAGAAGAAAGAGTACAACATGGAGAAGATTTACAAATGTTTTGCGTGTCAGAAACAGTTTCTACTGAGTTATTATTTGAAGTTACATGTCAGGTCACATACAGATGAAAAGCCGTACACTTGTAGTATCTGTGGACAGTCCTTCATAACTGCAAGTCACCTTGGAAGACACAATAAACGGATACATCTGGCGGTCAAACATCAATGTCGAATCTGTTATAAGTTTTTCTCTAGATTCGAACTTCTGACGCGCCATTTCGATAAAAAGCATCCAGCCGATAAATTGGAAGGAGAACCATATGATTATAACGTAATATTGCCATACCTAAAAGAATTAGAGGAACAACTACGTCAGAAATCTGAAGAGGACAAGAAACCTAAAACTGAGGACTTATGGGGTGATAAATGGCCCTTAGATGAACCTTCCAACAACCAGGGCAATCAGGATCAAAAGCTTTCAGAATCCGACAACAAAGACTTTGACGTACCACTACTGCCTCCTGAAAATATAATGGTTGAGCCGGCGACTATTTCCGATGAAATATCAGAGACGCATATAAAACTTGAGGTTGAGGACGCGTCGGAGGCCGATGTCGAGCCGGAGGCCGAGCCTGAGGCCGATGCGGCCTGTGATGCTAGAGAAGATAGTATAAAAGATGAGAGCTGTTCAGACGATGACTACTTCCCATCGAACACCTGGGCGTCCACCCCAGATATAGGGCCTCCGCCCCCCTCCCCCCCACGCAAGACACGCCGCAGCAAAACCGACGAGCACACGCTAAAATGTGACGTTTGCCAAAAGACAATTAGTTCAATATCGTACATGCGTGTTCATATGCGGACTCACACTGGTGAGAGGCCCTTTAAGTGTTATGTGTGCGGTAGAGGATTCATAACCAGCAGTAAAATGCACCGGCACGTGTTGACGCATAGTGAGACATGGGATGACAGTGGAAACGTCAAAGATGAAAAGAAGGAGGTGAAAAAGAAGGATGGTGAAACAAATGAAAATGGTGATGAGAGAACTGATACAGAAAAGAATGAAAAAGAAACGCATCCTAAAAAAGCGAAAGGAAAGTTTGCTAAGAAACGCAAGAAGGGTCCTAAAGTTGAAAGGCCAAAGAAGAAATATCAGAAAAGGCTTCATGCTTGTGAATTTTGTCATAAAAGATTTCTTCACGTGGAAACATTACAGGTTCACAAAAAGTCACATGAGGGTGAAGAATTGGTGATCAAATGTACTTATTGCCTCGCGCAGTTCGATGATGAGGCCTCTATGAGGCAGCATGAGAAAACGCACGATGGGCCAAAACCATACTTATGCACTCTGTGCGGGAAAACATACAAAAAACGGGAGACAATGATGTACCATAGAAAACACCATAAAGCCGTGAAGGAATTCGCTTGCGCCATCTGCGAGAAGCGATTCAACGCTCAATGTAAACTTCAACGCCATATTGTCACGCATGGCGTAGACAAATACGTCTTGCGGTACGAATGTCCGGTCTGCGCGCATATGTTTAATACAAAATATCATATACAGATGCATCTGGCGACCCACCAGAAGGAGGGATCAATCGTTGAAGAAAATCGCAACGAAATACTAGCAATGGTATTACAAAATGCGCGGAAAATACCAAAAGGACCCGACGCATCTGCCAACGTCACGGACATTATACCAGCCGACGAACGGAGCCGCGTGTGCAACATATGCGGCGAGGTATTCCAACATTTTTACTATCTAGAAGAGCATCTCAAGAGCCATGGCTCGAAAATAGCAGTAGAAGACTTAAATAAAACGGAAGAAAAGAAATATATATGTCCGATATGCAACAAAAGTTTCAAGTTACATTATTATCTGAAATTACATAGTTTTACTCATTCGAAGGAGAAACCATTCATTTGTCAACAGTGTGGTAAAGGATTTATAACTAGGGGTAAGTTGAAGAGGCATTTAGAAACCCATACAGGGTTGAAGAAGTACCAATGTCATATATGTTATAAATTTTTTACTAGACCCAGCTATTTGAGAATACATGTACGAACAATTCACGGTACACAAGATTATAATTTTAGAATCGATAAAGATTATAGCGTGGGTACTTATGGGGCACTCTCTGTTAGCGATATGAGTCAGAGTAGCTTATAA
- Protein Sequence
- MNNLTVDVDPLSSFEYPQYNQYPNNDFSYDLKAEEPNIMYKYEMFPISQASERDENNDTNKNNKPSTHLPNNEAKNPKKNDGTAPDQPHNPEEEDVKPIIDGRKVKKERIKGRTSSYWSVKIADKDFAFYGCAVCNLQFKSLHELDQHVTIHKDRITSYDLRLKNQMLKKSKNKGKKLKKVKEEVITKLEIEIKPEDGYIGEEKAADFEKKTENTEGSIGTGDNQDSKCDDKKDLKNININCSEKKKEYNMEKIYKCFACQKQFLLSYYLKLHVRSHTDEKPYTCSICGQSFITASHLGRHNKRIHLAVKHQCRICYKFFSRFELLTRHFDKKHPADKLEGEPYDYNVILPYLKELEEQLRQKSEEDKKPKTEDLWGDKWPLDEPSNNQGNQDQKLSESDNKDFDVPLLPPENIMVEPATISDEISETHIKLEVEDASEADVEPEAEPEADAACDAREDSIKDESCSDDDYFPSNTWASTPDIGPPPPSPPRKTRRSKTDEHTLKCDVCQKTISSISYMRVHMRTHTGERPFKCYVCGRGFITSSKMHRHVLTHSETWDDSGNVKDEKKEVKKKDGETNENGDERTDTEKNEKETHPKKAKGKFAKKRKKGPKVERPKKKYQKRLHACEFCHKRFLHVETLQVHKKSHEGEELVIKCTYCLAQFDDEASMRQHEKTHDGPKPYLCTLCGKTYKKRETMMYHRKHHKAVKEFACAICEKRFNAQCKLQRHIVTHGVDKYVLRYECPVCAHMFNTKYHIQMHLATHQKEGSIVEENRNEILAMVLQNARKIPKGPDASANVTDIIPADERSRVCNICGEVFQHFYYLEEHLKSHGSKIAVEDLNKTEEKKYICPICNKSFKLHYYLKLHSFTHSKEKPFICQQCGKGFITRGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRIDKDYSVGTYGALSVSDMSQSSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01083588;
- 90% Identity
- -
- 80% Identity
- -