Hpyr001462.1
Basic Information
- Insect
- Habrosyne pyritoides
- Gene Symbol
- -
- Assembly
- GCA_907165245.1
- Location
- OU015614.1:644261-650167[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 37 0.0033 0.25 12.3 2.7 1 23 74 96 74 96 0.97 2 37 2.5 1.8e+02 3.3 0.0 2 23 124 146 123 146 0.90 3 37 0.053 3.9 8.5 0.4 2 23 167 189 166 189 0.91 4 37 0.015 1.1 10.2 2.4 1 20 194 213 194 215 0.94 5 37 0.46 34 5.6 3.0 2 23 238 260 237 260 0.91 6 37 0.076 5.6 8.1 0.1 3 23 290 311 288 311 0.89 7 37 0.017 1.2 10.1 0.3 5 23 332 351 329 351 0.95 8 37 0.0048 0.36 11.8 3.8 1 23 395 417 395 417 0.95 9 37 0.027 2 9.5 0.1 2 23 445 467 444 467 0.91 10 37 0.3 22 6.2 0.4 2 23 488 510 487 510 0.93 11 37 0.0096 0.71 10.9 4.9 1 23 515 537 515 538 0.93 12 37 0.0015 0.11 13.4 1.6 1 23 542 565 542 565 0.95 13 37 0.049 3.6 8.6 2.8 2 23 568 590 567 590 0.96 14 37 0.0049 0.36 11.8 0.3 1 23 666 689 666 689 0.96 15 37 0.36 27 5.9 0.1 2 23 718 740 717 740 0.95 16 37 0.0016 0.12 13.3 0.3 1 23 762 785 762 785 0.97 17 37 0.00016 0.012 16.5 0.2 2 23 791 813 790 813 0.94 18 37 8.9e-06 0.00066 20.4 0.9 1 23 818 841 818 841 0.95 19 37 7.6e-05 0.0056 17.5 0.3 2 23 847 869 846 869 0.95 20 37 1.3 98 4.1 2.9 1 23 873 896 873 896 0.93 21 37 0.0056 0.42 11.6 0.6 2 23 903 924 902 924 0.97 22 37 0.11 8.5 7.5 1.2 1 23 930 952 930 952 0.93 23 37 0.0016 0.12 13.3 1.4 1 23 987 1009 987 1009 0.96 24 37 0.1 7.5 7.6 0.0 2 23 1037 1059 1036 1059 0.91 25 37 0.027 2 9.5 1.9 1 23 1079 1102 1079 1102 0.96 26 37 1.3e-05 0.00099 19.9 0.3 1 23 1107 1130 1107 1130 0.96 27 37 0.11 7.9 7.6 1.9 1 23 1135 1158 1135 1158 0.96 28 37 2.5e-05 0.0018 19.0 2.2 2 23 1161 1183 1160 1183 0.95 29 37 0.009 0.67 11.0 1.4 2 22 1190 1210 1189 1210 0.95 30 37 0.32 23 6.1 0.7 1 23 1267 1290 1267 1290 0.92 31 37 0.088 6.5 7.8 0.2 2 23 1362 1385 1361 1385 0.94 32 37 4.6e-05 0.0034 18.2 0.5 3 23 1392 1413 1391 1413 0.94 33 37 0.0017 0.13 13.2 3.3 2 23 1418 1440 1417 1440 0.95 34 37 0.00073 0.054 14.4 2.0 1 23 1445 1468 1445 1468 0.95 35 37 4.5e-05 0.0033 18.2 6.0 1 23 1472 1495 1472 1495 0.97 36 37 0.001 0.077 13.9 1.0 2 23 1502 1523 1501 1523 0.96 37 37 0.00019 0.014 16.2 0.4 1 23 1529 1551 1529 1551 0.97
Sequence Information
- Coding Sequence
- ATGGTCTGTGATATCCGATCGATCGGCATCGACAAGAAATCGACTTCGATTTTGTTTTCGAAATTTATAAATGGATACATCAGTGGAAACATTTTCGTTTCAGATAATGTACCAGAAAAACCGTTTCAACGCACGCAGCGTTCGAAACTGACGCGCAGAAGTAATCTAGGCACATTATTCCATAATACTAGTATTATACCATTCAAATGGAATAACGTCTTCATGTGTTTCTACTGCGGTAAACACACGAACTCTTACGAAGAATTGAAAATACACACGAAAGCACACGGAAAATGTACACTGCAGGAATACTCCTTCAGACAACTCGCGTCTATAAAACATGATGTGAAAATTGATGTATCAGAATTGGTTTGTAATCTATGCGAATCGAATTTCGTGCGGCTAGAAGACATAATCGATCATTTGATCGATGATCATTCGTTAAAATACGACAAAGGTGCTTACATGCACATGTGGCAATTTCCATTGAGCTCGCTCAAATGCTACGAGTGTAATGAAGCTTTTGTATATTATTCATTCTTTATAAATCACGTTTTAGACAAACATCCGTTGGACATTTTTAAATGCGATCACTGTAGTGAATTCTTCAATAGCCAACACGACTTAGATTACCATAGAATCGAAGAGAATATTAAATGCGTTCTCAATATGTCTACGGCCCTACCCTTCAGGTACACCAATAATCGTTTGCGCTGCTTTCACTGCTACACTGAATTCGCCAAATTCAAATCGTTGAAGCAACACACTATTGCCACCCATAAAATACTAGATATCAAAAAGAATGTAGGCTTGTGCGAAATCAGAAATGAAAACGCGAAAGTATACTTGGACATTGCAGGTCTAGCTTGCAATATATGCAACGAATCGTTTAAAAAATTGGACATTCTTATCGATCATTTAGTTTCCGAACACGATGCGAACTACAACAGGACTGTCAAATGTGTCTTCAATCCTTACGTACACAGTGTTGCTATATGCGAGAAGAAGTTCCCTTCGGCGCATCAATTGAAACTGCACAGATCTAGAGTTCACGGCGATAGTCATTTGTTTTCAGATAAAAACGGGCCTCCAACAGTGCTCAGTGCCAACCACGCCCGGAGGCAAAATCTACAAATATTATTCAACAATACATCTTTGATACCATTCAAATGGCGGGGAAAATATTTGTGCTTTTACTGCGGCGAGGATTTCAAGGAATGTAGCAAACTTAGGAAACATACGAAAGGTCACGGCTTTTGCTCTGAGGATGACCGCGCGATAAAACTAGTCAAAGCTTTCGATAGTGAAGTCAAAATCGACGTATCGGACGTGACGTGCGAACTTTGTGATGAAGCATTTTCTAATTTCGATCAGGTGGTCAGTCATTTGATATTCAAACACAATCTGCCTTATAATAAAGATGTAGATTTGATGATCGCAACTTATAGGTTGGTCGACTTAAGATGCCTGATTTGCGAAGAAACTTTCAACTATTTTCTTAAATTAGTAACTCATGTGAATAATAGTCATTCAGATAAATGTTTCCTCTGCCACGATTGCGAACAGAGATTTAATAAGAAGCGAGATCTGGATACGCACGTTAGACTTCACCATAAAGAAGAGTACAGGTGCTCGAAGTGCTCCCAACGTTTTGTCACATATAACGCCTTACAGACTCATCGATCGAATGCCCATGTGTCCACTTGTAATATTTGCTTCCAAACATTTTCATCGAACACTAAGAGGTTGAGTCATTTAAAAATGAAACATATCACTGGAGACGCCGCCTGTGGATTCTGCTTTAAAACTCAAACTACGAAACAGGCATTTTTACGCCACGCATCGAAATGTAACGCTAAATCAGAATTCTTTGTCAATAAAACTATAATCGCTGATGACGATGATAACAAACCATCGATTAATGTTATCAGGCGTAATATTGCTTCCATTCTTAACATGTCTACAGCCGTACCGTTTAAGTACTACCGGAATCAGTTCAGGTGTTTCTATTGTCCTAAAGATTTTGCAGAGAGTGATGTTCTTAAAGAGCATACGGTGACCGAACATCCGCATTGTGATATTAAGTTAAAATCAATGCGTTTGCGTAGCAAATATGATGGTATCAAAATAAAGATCGACACATCTACCTTATCCTGTAAACTTTGCTCCGAAAATATAAGAGATTTAGATACTCTTATTGATCATTTAGTGACGGAACATAAAGTCGCTTACGACAAATCCGTCGATAATAATCTTCAGCCCTTCAGTTTAATTAAAGACAGTTTTCCTTGCCCTTTCTGCGAGGAGGTGTATAGATACTTTGGTATGTTATTAAAACATATTAGCACGAGACATACAGACAATAATCTAATTTGTGTGTACTGCGGAATATCTTTTAGGACCGAACCGAACTTACGTACACATGTTTTGAGACGTCATAAGGGCATACGTTATAAGTGTAACCACTGTGACGTAGGTTTTACAAACAGCAGCGCTTTGCAGAATCATTTGGGCAAAGTCCACGGTAGCAAAGTTGTCAAATGTCCACAATGTCCCGAGAAGTTTACCACGCAGTATTGGATGCAGAGGCATAGGATCATCAGCCACGATTCGGGCCATAAGTGCATTTACTGTGACAAATTGTTCACTAGGAACTCTATAATGGTAAACCACGTTAAGAGATTTCATTTGAAAGAGAAAAATGTGAAGTGTCCTCAATGTTCCGAACGATTTTTCGACGCGCAACGGTTAAAAATGCACATGGTCAAACATGTCGGTGCAAGGAACTTCCATTGCGATGTATGCGGCAAGAAATTTCTTTGGAAGAAAAACCTTATAGGGCACATTTCATCGCATAACAGAGGCCCGTTCCAAGGGTGTACCTCAGAGAAACGGCGCAAAAACCTGCAAATACTCTTCAACCATACCACAATTTTGCCTTTTAAATGGCGCGGAAAATATCTATGCTTCTATTGTGGAAAGAGTTATGCAGAATATCCGGAATTTAAAAAGCACACCAAATCTCATGGCCCTTGCACCACAAAAGATCATTCCTTGAAATACATCAAAGGCAACCATATAGAGATTAAAATCGACGTTTCCGATATAACATGCGAGATTTGCAATGAACCATTCGTATCATTCGATGAGATTATCGATCATTTAATCGGTAAACATAACATGGATTACAACAAAAGTATCGATATACCTTATCAGGAATATAGGCTTGTGGACTTCCGATGTATGCACTGCGAGGAGCAGTTTTCTTACTTCGCATATTTGGTCAATCACGTAAATAATATGCATCCACAAAATAGTTTTATATGTGACGATTGTGGGATCACTTTCAATAAAAAGAGAGATCTATCTGTACACATACGAAACCTGCACCGACAAGGCGGATATGCTTGCGATCAATGTTCCCAGATTTGCGATTCTTACTTCACTTTGCGCCAACACCAGAATAACGCTCATTTTTGCAAATGCAACAACTGCGGACTAAGATTCGCGACCCAAAAGCTCTTACGAAAGCATATACAAATAGACCACCCAGAAAGTTCGGATTTAAAATGCACTTATTGCTCAAACGCATTCCATACTTCTCAGGGATTGAAACAACACATCAGAAAATGCAAAGTTAGAATATTAGCGCAAGTTGAAGCGAATAATATATCGTTCCCCGTCGAGAATAAAATTGGTGCGGAACCGAAAAAGAAACAAAACGTATTACAAATAAGGCAAAATATCATATGCGTGCTCAATATGTCGACGGCCATCCCTTTCAGGTTCTTTTCGAAATTCAGCTGTTTTTATTGCAGTCAAAAGTTTGTGGAGTATGAGGTATTGAAAGAGCATACTATCTTGGAACATCCCGTGTGCGATTTGAAGTCGAAATGTATGAGGAAATGCAAGGGGGAACGGATAACCGTGAAAGTGGACATAGCGTGCTTAGCTTGTAAAGTGTGCTGCCTCCCGATGCCTGACTTAGACTTCTTCATCGACCACGCTATCACTGAACACAAGGCGAACTACGACAAGTCTATCACATGCCTCGAGGCCCACCGAATCATAAAAGACAATATGCCCTGCCCCCTATGTCCTAACGTCACATTTAGATACTTCACAACACTCTTGCGTCATATGAACTCGGAGCACAATAATAACAATCGAATTTGCGATTTTTGCGGTAAAAGTTTTCGGACGGTCACCAATTTGAATGTACACATTTCGTACACTCACACTAAGTCGAGCGAATGTGATGATTGTGGCGTCAAATTCAAGAATCAGTGGTGTCTTGCGCGCCATAGAGCAAAGTGTCACAACGTGAAAGATTTCAAGTGCCCAAAATGCCCCGAACAATTCGAGTCTCAGTACCACAAACAAAAGCATCTGATAAATGCCCACGATATTGGTCACAAATGCACTTATTGCAACAAAATGTTCACAAGGAATTCGTTTATGAAAGATCATATACGCCGGACACATTTGAAAGAGAAAAATGTACCATGTTCCGTTTGTAATGAAAGATTTTTCGATAATCACTTGCTTCGTATGCACATGGTCAAACACAAGGGAGAGAGGAAGTTTATATGCGATGTATGCGGGAAAGCGTTCTTGAGGCGGAGTAATTTGAGTTCTCATAAGGAAATGCACAAGAAGTATGGACATGTACCTTTGCAGGCCTAG
- Protein Sequence
- MVCDIRSIGIDKKSTSILFSKFINGYISGNIFVSDNVPEKPFQRTQRSKLTRRSNLGTLFHNTSIIPFKWNNVFMCFYCGKHTNSYEELKIHTKAHGKCTLQEYSFRQLASIKHDVKIDVSELVCNLCESNFVRLEDIIDHLIDDHSLKYDKGAYMHMWQFPLSSLKCYECNEAFVYYSFFINHVLDKHPLDIFKCDHCSEFFNSQHDLDYHRIEENIKCVLNMSTALPFRYTNNRLRCFHCYTEFAKFKSLKQHTIATHKILDIKKNVGLCEIRNENAKVYLDIAGLACNICNESFKKLDILIDHLVSEHDANYNRTVKCVFNPYVHSVAICEKKFPSAHQLKLHRSRVHGDSHLFSDKNGPPTVLSANHARRQNLQILFNNTSLIPFKWRGKYLCFYCGEDFKECSKLRKHTKGHGFCSEDDRAIKLVKAFDSEVKIDVSDVTCELCDEAFSNFDQVVSHLIFKHNLPYNKDVDLMIATYRLVDLRCLICEETFNYFLKLVTHVNNSHSDKCFLCHDCEQRFNKKRDLDTHVRLHHKEEYRCSKCSQRFVTYNALQTHRSNAHVSTCNICFQTFSSNTKRLSHLKMKHITGDAACGFCFKTQTTKQAFLRHASKCNAKSEFFVNKTIIADDDDNKPSINVIRRNIASILNMSTAVPFKYYRNQFRCFYCPKDFAESDVLKEHTVTEHPHCDIKLKSMRLRSKYDGIKIKIDTSTLSCKLCSENIRDLDTLIDHLVTEHKVAYDKSVDNNLQPFSLIKDSFPCPFCEEVYRYFGMLLKHISTRHTDNNLICVYCGISFRTEPNLRTHVLRRHKGIRYKCNHCDVGFTNSSALQNHLGKVHGSKVVKCPQCPEKFTTQYWMQRHRIISHDSGHKCIYCDKLFTRNSIMVNHVKRFHLKEKNVKCPQCSERFFDAQRLKMHMVKHVGARNFHCDVCGKKFLWKKNLIGHISSHNRGPFQGCTSEKRRKNLQILFNHTTILPFKWRGKYLCFYCGKSYAEYPEFKKHTKSHGPCTTKDHSLKYIKGNHIEIKIDVSDITCEICNEPFVSFDEIIDHLIGKHNMDYNKSIDIPYQEYRLVDFRCMHCEEQFSYFAYLVNHVNNMHPQNSFICDDCGITFNKKRDLSVHIRNLHRQGGYACDQCSQICDSYFTLRQHQNNAHFCKCNNCGLRFATQKLLRKHIQIDHPESSDLKCTYCSNAFHTSQGLKQHIRKCKVRILAQVEANNISFPVENKIGAEPKKKQNVLQIRQNIICVLNMSTAIPFRFFSKFSCFYCSQKFVEYEVLKEHTILEHPVCDLKSKCMRKCKGERITVKVDIACLACKVCCLPMPDLDFFIDHAITEHKANYDKSITCLEAHRIIKDNMPCPLCPNVTFRYFTTLLRHMNSEHNNNNRICDFCGKSFRTVTNLNVHISYTHTKSSECDDCGVKFKNQWCLARHRAKCHNVKDFKCPKCPEQFESQYHKQKHLINAHDIGHKCTYCNKMFTRNSFMKDHIRRTHLKEKNVPCSVCNERFFDNHLLRMHMVKHKGERKFICDVCGKAFLRRSNLSSHKEMHKKYGHVPLQA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -