Hpyr002133.1
Basic Information
- Insect
- Habrosyne pyritoides
- Gene Symbol
- -
- Assembly
- GCA_907165245.1
- Location
- OU015599.1:887985-888572[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-07 6.4e-05 23.0 0.0 14 39 31 56 18 62 0.78 2 2 7.3 1.9e+03 -0.9 0.0 18 22 137 141 128 148 0.67
Sequence Information
- Coding Sequence
- ATGCCGCGAAAATATAAAAGGAAAATAGGGGCACCCGTTCGGGCTGCTTGGTCTGAAGAAGCCCTTTGCAAAGCTTTTGGGGAAATGGATAAAGGCCAAGTCGGTGTAAATGAAATATCTCGTCGTTATGGTATTCCATCTCGAACTTTGAGGAGGCGATATGCTAAAAAAAACTGTGAAAAACTTACTTTGGGAAAACATCCCACACTGGACTTTGACAACGAAAAACGTCTCGTAGCGCACATACAAAAATTAGAAAAGGCAGGATTTCCCACAACACGACAGGATGTAAGAAGACTCGCTTTTGAATTTGCGGAGAAACTGGGTTTGGAAAATTCTTTTAACAAAGAGACACGTATGGCTGGTCAGCACTGGCTCAAATCATTTCTTGAACGACACCCAGAACTCAGTATTCGCCAGGCAGAAGGTTTGTCTATAAGTAAACAAAATGTTTGA
- Protein Sequence
- MPRKYKRKIGAPVRAAWSEEALCKAFGEMDKGQVGVNEISRRYGIPSRTLRRRYAKKNCEKLTLGKHPTLDFDNEKRLVAHIQKLEKAGFPTTRQDVRRLAFEFAEKLGLENSFNKETRMAGQHWLKSFLERHPELSIRQAEGLSISKQNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -