Hpyr023569.1
Basic Information
- Insect
- Habrosyne pyritoides
- Gene Symbol
- -
- Assembly
- GCA_907165245.1
- Location
- OU015596.1:2453936-2454280[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-10 1.5e-07 31.4 0.0 3 37 17 51 15 56 0.94 2 2 7.2 1.9e+03 -0.9 0.0 9 19 51 61 51 62 0.83
Sequence Information
- Coding Sequence
- ATGATACGGACATATGAGAAGAAAAGTTCGAGACTAAGTTGGTCCATGGAAAACATGAAACAGGCAATTGATGGAGTCTTAAGCAAAACTGCAGGCTATAGAAAAGCAGCTCAGCTGTATAGTGTACCACAGACCACATTAGAGCGTCACGTCGCTAAAATAAGGAAAGGCGAGCTGTCTCTAGAATCTACTCCAAGTAACTTCAAGCCCGTGTTTTCCAAACAAGAAGGAGAGGAGCTGGTCTCCATTTCTATAATGTACCTTTATTATAGAAGTGGAGAAACGTTTGTTTGGTTTAACCACTATCTTCCTACGGAAGCTAGCTTATCAGCTAGCGGAAAATAA
- Protein Sequence
- MIRTYEKKSSRLSWSMENMKQAIDGVLSKTAGYRKAAQLYSVPQTTLERHVAKIRKGELSLESTPSNFKPVFSKQEGEELVSISIMYLYYRSGETFVWFNHYLPTEASLSASGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00761606; iTF_00761586; iTF_00761595; iTF_00761596;
- 90% Identity
- iTF_00761606; iTF_00761586; iTF_00761596;
- 80% Identity
- -