Hpyr010533.1
Basic Information
- Insect
- Habrosyne pyritoides
- Gene Symbol
- -
- Assembly
- GCA_907165245.1
- Location
- OU015586.1:12950983-12951465[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-10 3.8e-08 33.3 0.0 4 38 17 51 14 56 0.89
Sequence Information
- Coding Sequence
- ATGCCTCGAAATTACGCAAGGAAAACCACACCTACATATGACACTCAGGCTCTTCGACACGCAATAGAAGATGTAAGGAGTAAAAAACTCACACTGGGAAAAGCTGCAATTAAATACTCAGTGCCAAAAACAACATTGTTTAAGCAAGTAAGAAAAGAAGTATTCGAGACACCAAAAAAAGGTCGGTACTTTATATTTAATAAAGATCAAGAAGAACAATTGGAAAGGCACATACTCGCTTGCTGTAACTCTTTTTATGGCATAACACCAAAACAACTACGGAGAATTGCTTTTAGATTTGCTGAAGCTAACAATCTGAAACACAATTTTAACAAAGAATCTCAGCTTGCAGGGAAAGATTGGTACTATTCTTTCATGTCTAGACATCCTTCTATCAGCCTTAGAACTCCAGAAGCTACTTCTCTCAATAGAATAACAGCTTTTAATGCCACTGAAGTTAACCTGTTTTTTGATCAGCTATAA
- Protein Sequence
- MPRNYARKTTPTYDTQALRHAIEDVRSKKLTLGKAAIKYSVPKTTLFKQVRKEVFETPKKGRYFIFNKDQEEQLERHILACCNSFYGITPKQLRRIAFRFAEANNLKHNFNKESQLAGKDWYYSFMSRHPSISLRTPEATSLNRITAFNATEVNLFFDQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01564524;
- 90% Identity
- -
- 80% Identity
- -