Basic Information

Gene Symbol
XBP1
Assembly
GCA_907165245.1
Location
OU015591.1:12407582-12409103[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 6.8 8.7e+03 -2.8 0.0 17 25 30 38 28 39 0.71
2 4 2.3e-18 3e-15 56.4 10.2 2 63 43 104 43 106 0.94
3 4 6.6e-05 0.084 13.3 0.6 33 55 88 110 87 115 0.91
4 4 8.7 1.1e+04 -3.1 0.0 22 39 139 156 135 159 0.70

Sequence Information

Coding Sequence
ATGAGCGCTCCCATTATCATCACGGTGCCGAATAATTACCTGACGGTGGAACAGGAGACGGAAGTCCTGATGGATGTTCCATCCCCTGCTCCATCCAGGAAGCGGCGACTGGACCATTTAACATGGGAGGAGAAGATGCAAAGAAAGAAACTAAAGAATCGCGTGGCGGCGCAGACTTCCCGCGACAGGAAAAAAGCTAAAATGGACGAAATGGAGGATCGGATAAAGCATTTTATGGATATGAATGAGAGATTGCTTAGTGAAGTTGAAAGCTTAAAAGCGTTGAACGAGCGTTTATTGAGCGAGAACTCATCGCTTCGTAGTGAGGCGGCGGCGCGGACCGTCACGGAGGCCCCCAGACCAGCAGAGTCTACTCCTCAGCAGAAGGAAGGGCCTCCGTCGGCGATCCGCGCGGCACGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACATCCTCGCTCACCTCGACTCAGAAGAGTATCTCGATACCCTCCATCAACTTGCAAACTCCCTCCTCCAAGAGATTGATGCAGGTTCTACAGGAACGAATGAAGATGTCACAGTCAGGGACACTAGAGAGTGTTCTAAAGGAGCTCAAGTGGTGGGGACCGCAACAGAGCAACTGGAATCCAGTGGAAGTAGCATCGTAG
Protein Sequence
MSAPIIITVPNNYLTVEQETEVLMDVPSPAPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEDRIKHFMDMNERLLSEVESLKALNERLLSENSSLRSEAAARTVTEAPRPAESTPQQKEGPPSAIRAARLLLAMCLLSQTSSLTSTQKSISIPSINLQTPSSKRLMQVLQERMKMSQSGTLESVLKELKWWGPQQSNWNPVEVAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_01083042;
80% Identity
-