Basic Information

Gene Symbol
Zmiz1
Assembly
GCA_001263275.1
Location
NW:610643-634265[-]

Transcription Factor Domain

TF Family
zf-MIZ
Domain
zf-MIZ domain
PFAM
PF02891
TF Group
Zinc-Coordinating Group
Description
This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.079 3.8e+02 0.1 0.7 4 24 450 470 447 475 0.88
2 2 6.6e-26 3.2e-22 77.2 4.4 1 50 530 579 530 579 0.98

Sequence Information

Coding Sequence
ATGGTGGCAGCTGCCACCGCTACGGCCACCGCCACTGCTAGCGTGGTGGCCATGCAGGACCGCCAAGACATCCCCTCGCAATTCAATCAGATGCAGAGCCAACATGGAATACCCCACCAAACGTATAACGCAGGGTACGCCCAAAGAGGACCAATGGCCGGAATGGGGCCAGTCGGGATGAGTAACTTCAATAGCATGGGCACGATGAGCCCGATGCACTCTATGAATTCCATGAATTCGATGAACAGTATGAATGGCATGAACTCGATGAATCCTATGTCGATGGGAGGTATGAACGGCATGAGTAGTATGAACGGAATGACGCCCATGAGCTCCATGAGTAACATGGGTAATATGGGCATGAACAATATGATGGGACCTAACAACATGCAGCTGAACAAGATGAGCATGCAGGCTCAACCTCACCAAGGCTATCCAAGGAGATTAGCGCCTTATCCGAACCCCGCGATGCATATGGCGCAAAAAAGGCAGCAGGGACCTTACGCAGGTCCTAATCCAGCTGCGATGCAGCCAAGCTTCAACGGAATGACGACGTCGCAGTATCCGACCAATTACCCCGCAGCAGCGAGGCCGACCTTTCAACCTCAGTATCAGCCTATGCAGACTATGAATCCGTCGGCTGCTGGCTTTGGGCCTAACTCGATGATACGGGGCAGCAATATGAGGCAAACTGCGCCCTCGTACAATACCGCCAGTCAGGCGGCGAGCAACCAATATTACGGTAGCAATGGTATACCGGTTAGCATGGGACCTACCACGGTTGGTAATCAGTTCGTTGGCCACCAACCGAACTCAGGATACGCTGGTGGCGCATCCTCGTATGGTGCAGCCGGTGCTGCAACCAGCCAGTACCAACAGGATGTCGCGTCGATGAGAACGACGGGTGCGGCAAGCCTGAGTTACCAACACAGTCCTATCCCCGGTAATCCGACACCGCCGTTGACCCCGGCCACCAGCATGCCTCCTTACATTAGCCCGAATCCGGATATCAAGCCTAATTTCAACGAGATGAAGTCGCCGGTTAACATTCAGAAGGACGATGAGTTGAGATTAACATTCCCTGTGAGGGATGGCATCATTCTTCCACCCTTCCGCTTAGAACATAATCTGGCTGTAAGCAACCACGTATTCCAACTGAAATCTACGGTGCATCAAACGTTGATGTGGCGGTCCGACTTGGAACTGCAACTCAAGTGTTTCCACCATGAGGACAGGCAAATGAATACGAATTGGCCAGCGAGCGTGCAAGTCTCTGTAAACGCTACGCCGTTGGTTATCGATCGTGGTGAGAATAAAACGTCTCACAAGCCCTTATACCTGAAGGACGTTTGTCAACCGGGAAGGAACACGATACAAATTACTGTATCGGCATGTTGTTGTTCCCATTTGTTCGTGCTTCAATTAGTTCACCGACCAAGCGTACGAAGCGTACTTCATGGATTGTTACGTAAAAGGCTACTTACAGCGGAACATTGTATAacaaaaatcaaacgaaactTCAATAATACTATTTCAAATAACGGCATACAGTCGGAGAAAGATGTCGTAGAACAAACAGCACTTAAGGTATCCTTAAAATGTCCTATTACTTTTAAACGTATTACACTGCCAGCTAGGGGACACGATTGTAAACACATTCAATGCTTCGATTTGGAGTCATACCTACAGCTAAATTGTGAACGAGGATCTTGGAGATGTCCTGTATGCACGAAACCTGCACAATTGGAAGGTTTAGAGGTTGATCAATACATGTGGGGCATTTTGAACACTCTAAACACTGCAGAAGTAGAGGAAGTCACGATAGACTCGATGGCAAATTGGAAACCAGCGAAAAACTTAACTGGTATAAAGTCCGAGGAAGAAAGCGACTGCAAGAGAATGACAAAGGCAATGTCACCTGGAAGTATGAATATGCCCACCATGAATAATTGGGATATGAATCAGGCAATGAGCCCATACATACCGCCTGACATGAGCAGCATCGTAAGCGGCTCTATGATGAATAATACACCGTCTACGTACGGAAACAATAATATTAATCATCGGAATTCGTCGGGAGGATCTTTTGACATTAATTCTGGAACAAATACGAATACTAATAATGATTACACTAATGGAGCAGGTCCTCTTTCACATTTAAACGAATCGGTGAACTCTTTAGATCCTCTGAATGCTATGGAGAAGTCACTTAACGATCAGATGCCCCATACACCACACACACCTCACACTCCTCATACACCTCATACACCAGGTGGTGGAAATAGTGGTCCACCTAGCGTTCCTCCTGCGTCTCAGGAATCTACAGGAAACCATAACACATCTGGTAGTACGAATACAAACATAAATAACGATACTACAGATATACCATCGGACTTAAATTTTGACCCGGCTGCGGTAATAGATGGCGAGGGTACAGGCCAAGAAGCGTtgaatCTTTTGCCGGATAACGTTGTGGATCCAATGGAATTACTTTCATATTTAGATCCACCAGATCTGAATACCCCTCCCAGCAGCGGCGCTAGCAGTGGTAACCCCTCATCGAGCGACGACATACTAGCActttttgaataa
Protein Sequence
MVAAATATATATASVVAMQDRQDIPSQFNQMQSQHGIPHQTYNAGYAQRGPMAGMGPVGMSNFNSMGTMSPMHSMNSMNSMNSMNGMNSMNPMSMGGMNGMSSMNGMTPMSSMSNMGNMGMNNMMGPNNMQLNKMSMQAQPHQGYPRRLAPYPNPAMHMAQKRQQGPYAGPNPAAMQPSFNGMTTSQYPTNYPAAARPTFQPQYQPMQTMNPSAAGFGPNSMIRGSNMRQTAPSYNTASQAASNQYYGSNGIPVSMGPTTVGNQFVGHQPNSGYAGGASSYGAAGAATSQYQQDVASMRTTGAASLSYQHSPIPGNPTPPLTPATSMPPYISPNPDIKPNFNEMKSPVNIQKDDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKSTVHQTLMWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLVIDRGENKTSHKPLYLKDVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLHGLLRKRLLTAEHCITKIKRNFNNTISNNGIQSEKDVVEQTALKVSLKCPITFKRITLPARGHDCKHIQCFDLESYLQLNCERGSWRCPVCTKPAQLEGLEVDQYMWGILNTLNTAEVEEVTIDSMANWKPAKNLTGIKSEEESDCKRMTKAMSPGSMNMPTMNNWDMNQAMSPYIPPDMSSIVSGSMMNNTPSTYGNNNINHRNSSGGSFDINSGTNTNTNNDYTNGAGPLSHLNESVNSLDPLNAMEKSLNDQMPHTPHTPHTPHTPHTPGGGNSGPPSVPPASQESTGNHNTSGSTNTNINNDTTDIPSDLNFDPAAVIDGEGTGQEALNLLPDNVVDPMELLSYLDPPDLNTPPSSGASSGNPSSSDDILALFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00863647;
90% Identity
iTF_01090369;
80% Identity
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