Basic Information

Gene Symbol
gata4_1
Assembly
GCA_001263275.1
Location
NW:1285462-1309238[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-17 1.5e-14 52.4 3.2 1 34 745 777 745 779 0.97
2 2 5.5e-19 7.6e-16 56.6 2.1 1 35 799 832 799 833 0.98

Sequence Information

Coding Sequence
ATGACGAAGAGCAGAAGAAACGAGGATAAAATCCGGCAGGAAATGACGAAACATCGACAGGACGAATACGAGTTAGCCGATTACGTGGATGAAGAGAACGCGGCGGCGAGGGCCATGGAGGTCGTTGGAGAGAGTGTCGAAGGTGAGAACGAGGAGGGAAGGAGCAAGAAGAGGGTGAGCGGAGAGGCCGCGGAGCTTTTTCAACGACGGCAACAACAACTCGAGCAACAGCAACGGCAGCAGCAGCTAGCCTACGGAAAGCGTGGAGGCGAAGAAGGCGGGGACGTCGTGGGCGTGCTGGAGGCGGGACagcaggaaattgaaaatggcGCGGTCGTGGAGGCGAGCAGCGTGGAAGCGGTAACGATGCCCGTTTCAGCGGACCAGGAAAACGACGGCAGCGCCGACTACGGATTGAACTCGCTCAGCTACGAGCGAATAGACGACGAACCTGTTTTTCGGGCAAGGTGTTACATGGAGGAGAATTCGAGCGGCTACGGGGGCGGTGATCCAGGCAGCGATACGACCGAGCAAGAGGAACAGCAACAACAAGAGCAACAGGTTTCACAACCGCCCCACCAGcagcaccaccaccaccgccacggacaccagcagcagcagcggccCGAATACGTTCAGTTGGGGGCGAGAGTAGTATCGGTTCCCGAGGGTGGTGGGGGTAACGGACCGACGAGCGAGGTCTCCGCGTTGCCGGAGGAAAATCGGGCCGACAGTCACGCGCTTCGCTCTACGATGCATCGTTACGGTACTGAAGCGCTCTCGCCAACTGCGACCGATCATCACAACCACCACCATCACCTCCACCACCACCCTCTCCACCACCTCCATCATCgccagcagcaacagcagcagcagcagcagcagcagacGCAGCAGCAGCACCACCACCACGATCATCatcaacaacagcagcagcagccgcaccaccaccaccatcaccaTCATTTACAGTCGGACGCGTCTCAGCATAGCGtgctttcttcttcgtcgagtCATCGTCAGTTGGACGAGCGAGGAGCACAATCGCAAACACAGTCGCATCAAGAAGTGGACGAAGACGTGGATAGAGTGAGTGGAATCATGAGGGGAGCCCGTGGAGATTTTCCTCTTGGTATGTTGTTTCCAAACCTCGGTACCGCCGGCACCAGTAGTCCCGCCAGTAACGACGTCGGGACTAGCGAGAATCATCATCATCACTCTtaccatcatcatcatcatcaccatTTAGAGGAGGTATTGCCGGACGAGGCGTATCTTCAGCATCAGATAAGGGGCGGTGGAAGTAGCAGCGGGAACGGTGGTGGCGGAGGTGGAGCCGGAGGTAGTGGCGGCGGCGGTACGGAGAACAGCGGTGGCGGTGGATCTCCGAATTTGCGAACCGGTAGTTCACCGGGTTCCAGTCGCAGCCCGCACGACGAGCAAGGACTCTCGTCGCCGCACCGACCAGGGCAAGCGGACGGAGGATACAGTCCCAGCGATCAGGGCAGACAGTCGTACGCGCATTTGACAGCTATGCAGCCACCGTCCGCGGTGCAGGCGAACCACGGCATCAGCCAGGATGCCGGCGACCGCGTCTCCGATCAGCTTTACATGGATTCGATTTACGCTCATCACACGGCTGGGACGCCTCATCACCATCAGGAACACGAGACGGGTTCGCCGACTACTCATTCGCCCAGTGCAGCGCTTTCCAATTCGTTGTATCGTTCGATGAGCGGCTTGGGCAGCATGCCAACGGCAGACGCGGCGGGAACCGGAGCCGCTTATGCCCTTCCTTACATGACCACCAGCCCCACGGAATTGACGGCGAGTCACGCACGATTCTCGAAACGTACAGGCTTGGGCACCGGTCTTCCTGCCATCTCGGAGGATTACGGAGGTGCCAACAGCGGCAAGTCGTCGAGCACGGTGACTCATCAGCCATTGCCAGGCTTTTTGCAACCGTTTCGCGGTAGGGTGAGCTTTCGGGGATACAGTCCGTCTTATTCGACGCAGCAGACCAGCACCGGAGTCGGAGCCACGGCGGTCGAGGCCTCGTCCTGGAACTACGCTTCGCCCTCGAACGACTCTCTGACCACCCAGTACGCCGCTCCGTCCAGATGCCAGACCGTGAACCCAGCGTCGACGCCCACGCAGCATCAGCTCACCGCCACTGCAAGCCTTAGCGCAATGCACAACATCGAGGCGGAATACTTTACGGAGGGGCGCGAGTGCGTAAATTGCGGCGCAATTTCCACTCCGTTATGGCGACGAGACGGTACCGGGCATTACCTCTGCAACGCATGCGGTCTCTACCACAAGATGAACGGAATGAATCGACCCTTGGTGAAGCAGCCACGGCGATTGTCCGCTTCGAGACGGGTAGGCACTTCTTGCAGTAACTGTCAAACGAGTCAGACGTCGTTGTGGCGACGTAACGCGCTGGGTGAGCCAGTTTGCAACGCGTGCGGGCTTTACTACAAGTTGCACGGAGTGGTCAGGCCCCCTTCCATGAAGAAGGACAGCATTCAAACGCGAAAGAGGAAACCGAAGGGAGGCATGAAATCTACCGACACGCCCATCACCggcaacagcaacagcaacaacaacaacaacaacaactgtcgcaacaacaacagcagcagcagcagcaacaacaacaataccaacaacaacaacaacaccaacaacaacaacaataataacagCTTAAAGTTAGAGCCAGATGCGTTCAGTATAACTCCGGGTTGCTACGGCGGTACGTTTTACGGCAACCCGCAAACCTCCGGTCGGATCGTCTCGTACCAATCGGACGCACCTGGAATGTATTACGGCATGATCACCTctcagcaacagcaacaaacGCAGCCGCAATCCCAACAACCGCAGCAACTTCAGCATCAGCAACTTCTCGAGACGCACTCGCCGAAAGTGGAGTGCCCGTCACCGCCGTGCGCGAATCGCTCACCGGTCATGATAGCCAGTCATTCGCCCGATCACCACCACCAGTTACCTTCTCCGCATATCGTTACCCTCGGCAGTTCCTCTCCTAGCGCGGCCGCCACTGCCAAAATTATCCTCGACAACGGTCACCTGGACAGACCCACGGTTGTCTCCATATCCTCCTAA
Protein Sequence
MTKSRRNEDKIRQEMTKHRQDEYELADYVDEENAAARAMEVVGESVEGENEEGRSKKRVSGEAAELFQRRQQQLEQQQRQQQLAYGKRGGEEGGDVVGVLEAGQQEIENGAVVEASSVEAVTMPVSADQENDGSADYGLNSLSYERIDDEPVFRARCYMEENSSGYGGGDPGSDTTEQEEQQQQEQQVSQPPHQQHHHHRHGHQQQQRPEYVQLGARVVSVPEGGGGNGPTSEVSALPEENRADSHALRSTMHRYGTEALSPTATDHHNHHHHLHHHPLHHLHHRQQQQQQQQQQQTQQQHHHHDHHQQQQQQPHHHHHHHHLQSDASQHSVLSSSSSHRQLDERGAQSQTQSHQEVDEDVDRVSGIMRGARGDFPLGMLFPNLGTAGTSSPASNDVGTSENHHHHSYHHHHHHHLEEVLPDEAYLQHQIRGGGSSSGNGGGGGGAGGSGGGGTENSGGGGSPNLRTGSSPGSSRSPHDEQGLSSPHRPGQADGGYSPSDQGRQSYAHLTAMQPPSAVQANHGISQDAGDRVSDQLYMDSIYAHHTAGTPHHHQEHETGSPTTHSPSAALSNSLYRSMSGLGSMPTADAAGTGAAYALPYMTTSPTELTASHARFSKRTGLGTGLPAISEDYGGANSGKSSSTVTHQPLPGFLQPFRGRVSFRGYSPSYSTQQTSTGVGATAVEASSWNYASPSNDSLTTQYAAPSRCQTVNPASTPTQHQLTATASLSAMHNIEAEYFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGTSCSNCQTSQTSLWRRNALGEPVCNACGLYYKLHGVVRPPSMKKDSIQTRKRKPKGGMKSTDTPITGNSNSNNNNNNNCRNNNSSSSSNNNNTNNNNNTNNNNNNNSLKLEPDAFSITPGCYGGTFYGNPQTSGRIVSYQSDAPGMYYGMITSQQQQQTQPQSQQPQQLQHQQLLETHSPKVECPSPPCANRSPVMIASHSPDHHHQLPSPHIVTLGSSSPSAAATAKIILDNGHLDRPTVVSISS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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