Basic Information

Gene Symbol
CSRNP3
Assembly
GCA_001263275.1
Location
NW:13501-52571[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.089 8.6e+02 -1.2 5.7 57 114 95 151 73 157 0.60
2 4 0.08 7.7e+02 -1.1 0.5 45 113 376 442 363 451 0.48
3 4 0.1 9.7e+02 -1.4 4.1 80 137 448 504 409 515 0.49
4 4 9.9e-102 9.6e-98 325.5 8.7 1 218 756 966 756 966 0.92

Sequence Information

Coding Sequence
ATGGAATCACCTTCGGCCCAGGACCGCCTCGTTACGGCCCAAGAGGATTCCAACTCGGTCGAATTGCCGTCAGGGACAGCAACATCATCTGAGCAAGAATCGACGGCGGTGGAGAACGTAGCCAGTTCCTCTTCCGAACAGATTCACGATGTTCCACGTCAGCCTAGCGATAATCAGGGATTCGTCAGTCTAAAATTGTGCAAGGTGTCGTTGAAGGTGTTGAAGGAAATTTCGAGCAACGATTGTCAGTCGGACTCTCCGGACATGGGTTTGAAGCAGAGCAAAGAGAAGAAACAGGAGGAAGAGGGTAAAGAggtggagaaggaggagaaggagaaggtaGAAACAAAGGCAGAGGAGTCGATAGACCAGCCAGACTCTTCTTCTTTGGCAACGACAACTGTACAGCAGTGTGTCGATAAATCAACCAAGGATAATAACGTATTTTTAACTACCGGTATTGTAACATCGTCACCGATATGCAGGAAGAGGCCAGCCAGCGATTTCCTGCCGATCAACGCGGAGATCAAGAGGATCGGTGTCGAGGTACCAGAGAACGAGGTGAATCAGGTTCGCAGCGACGTAAGAAGGATCTCCCCGATATTGGTAAGCCTTCGAGAACGAACCCTAGGTGAAATATCCCTCTCCTCTGACTCGTGCCTCTTCGACAACACCGGAACCTCGTCTATCTCCCGGTGTATCCCGAGGAACAACAGCCTCCTCGAGGAGACGTTCACCAGTGGCGGTGGTTGTACGTGTAGGTTAACGATGAACAATGTGAGCCTGGACAGTACGTCGTTCGAAACGAACGGCGAGGTGGAGGTTGTAGGTTGTTCCGAGTCGGAGGACAGGGTGTGCAGAGCGACGACGGCCACGCCGTCTCAGGGAGGAGAGTGTGCCAACGAAGGCGTGAACAAGACGCCGATGGatgtgaaattgaattatacGGATTCTTTCATCGACGAGAGTTCTTGTTGCTCCCTGCCGCGGGATAGTCCCGAGAGGAATCTGAAATCGTACCAGGAGCCGAAACAATGCGAGAAACCTATAGAACTGTGTCCCTGCAGCGATACTGTATCCATGAACGAATCGTTTATGAAAAAGTCCATGGATCAGTTCACCGAGACGTCTATGAGCACGTTTCCACGTTTGATGGTTTCCTTGGAACGTATCGAGGTAACGCCGGacaagaaagagaagaaacgcgtTATCGGTAATAATGGtaacaacaacagcagcagcaagaaacagaagaagagcGAGGCAACGGACGAGGTGGACGTGAGAATCGAAACGGCAGATACGTTGGAGGAATGTTGTTTCGTCGATAGGTGTGCCGACGAGAATAAGAACGTCGAGAAGACTGAGCAGGAGAAACAGGTGGACTCTTCTGTGGTGTCTAGGCCGGAAGAGACTTCACAGGTTCAGCTACAATCGCCTTCCGTTAATGCGATTAAAAAGTGCAGGGTGATTTTGGAGAGGGTAACGGTGCCGAAATTGGACACAACAACGGATGTACAAAAATCGAAGAACGAAGAGGAGGCGTCTAGTAGTGTTGCTGAGAAATTAGCTGGTGATGAGAACACAGTGTTTTCATCGCCGTTACCTTCCACGGAGAATGTACAGCCGTTGAATAATATAGATGCAACAGAAGAGACGACACCAAGCTCGCCGGAGGAGATTTTGGAACCATCCGCGGATGTTCCGGAAACCATTGACACCGAGACGGAAACGGAGACTGGCTCTGATAGCTCTGAAATTTCGTCCATGACGAACGTACGGCTTGGTGGATGCGACGACGACGCGGTTTCCGATCAAATATCTTGCCAGGAGAGCGAGTCCATGTGCTGCGTGGATATTAATCCGGAGATCATATCCAGGCTGGAGCCGGAGAGGCCGGAAGCTTTCACGGAGGATTCCGCGGAGAGTTTGGCGCTTGCTACCGGTGCTCCGGACGAAGTTAGATCAGATGGAAGCGATTCTGGCCTGGGAAGTGAGATTCCCGGGGATACTGGGCCTGCACCTGTGCCCGAAAGCGATTCAGAGACTTCTTTCTTGGATAGGATACCTGACGATATCCTCTCTGACAAGGAGAAAGCTGTGAATCAATTGGACAGCTTTGTGCCGGCCGTGGGTGTACCAGGTACACCACAGACGCCATTGACGAACTTCCCAAGTCCTCCGAAGAGCAATCTGAAACGAAGATTGACGGATTGCATGGAAGGGGCTCCCAGCCCGAAAAGGAGCAGTACAGAGGAGtctatgaaaaagaaacgcaatATCCAGTTCGACGCAGTCACTGTTTACTACTTTCCTAGGGCACAGGGTTTCACTTGTGTGCCTTCTCagGGTGGCAGCACTCTTGGCATGAGCGCGACGCACACTCACGCCGAGCGGTTCTCGTTATCGGAGCACGCAGCGGAACAGAGACGAATCCATCGTGCCAGACTAGCGCAATTGCGCTCTGAGCGTGCTGCAAACTGCGTATCAGAAGCTGCCTCAAGTTCAGAGGATCCTAGCGACGATACGGACGAGGAACAGAGCGATAACGAGGACTTGGATATCGATAGTTATTATTTCCTCCAGCCAGTGCCTACGTGGCAAAGACGAGCCTTACTCAGAGCAGCAGGAGTACGTAGAATAGATGCTGTTGAGAAGGACGAGTGTCGCGACATTAGAGCAAGTAGAGAGCATTGCGGTTGCGGGTGTAAAGGATACTGCGACCCAGAGAGCTGTCCTTGTAGTCGAGCTAATGTAAAGTGTCAGGTTGACCGAATGGGTTTCCCTTGTGGATGTACCCGAGATGGCTGCGCGAACAGTTCGGGCAGGATCGAGTTCAATCCAGTACGGGTACGAACGCATTTCATTCACACTTTGATGCGGTTAGAGTTAGAGAAGAAGCACCGGGAGGAAGAGGAGGGGGCGGATCACGATGCTTCCGACAATCAGAACGGCAGAAGTCCGTTGAGGGAGATTAATTTGGGATCGGTGATGGAGAACAGGAATGGAGAGTCCTGTTTGAACGGTGGCGGTTTCACGACTCTACATTACGAGAATCACGATGCTAGGGACGGCGGGGCGAATTGTCAGCCAGAAGTGCCCGGTACAAGAGAGGACAGTCTGGATCTATACGCGATTAGAGACGACTGTTATCCTAGCGAAGACACTGTTGATGGTACGCAGGGTCCTTCAAGGAAACTACATCCTGAGTTTAGTCAAGCTTTTCAAACGTTCTCAGGTCAAACGAGTGCCGGAGTAAACTTTCAACAGCCTACTTATCAGGATTATCAGCCTTACGCTAACCTTCCTTCTACATCTAGGGTGCAATTTCAGCCGCAATTCCAAACGGTGCCAGGAAATCCAGGGTTCTCACATTACGCGCCTTATGGACAGGACAACACCGGAACAATTCAGGGGAACTGCCAGGTTCATCCCGGACAGCACTCGTCCAGTTACGAGGCTAGTTTCGCTCAAGACGAGACAACCGGATCACAATACACGAATCTAAACTCGGTGCAACCGATGAACACGGTGGTGCAACAGATGGGCAAACTGGAGCCGTTCTCGGAACTGTTGTCCGGCAGATATTCGTATTACGGTGAAATGGAGCCACAGACGCACGGTACTTATCATGGGAATGGAACAAAGGTCGAGGTGGAAAAGAGCCAAGGTAACGAGCAGCAATCGGAGAGCACGGAAGAATGCGACGAGAATTTCGGGGAGATTATAAAAAAGTCAATGGTCGAGACTGTATCCGCTTAA
Protein Sequence
MESPSAQDRLVTAQEDSNSVELPSGTATSSEQESTAVENVASSSSEQIHDVPRQPSDNQGFVSLKLCKVSLKVLKEISSNDCQSDSPDMGLKQSKEKKQEEEGKEVEKEEKEKVETKAEESIDQPDSSSLATTTVQQCVDKSTKDNNVFLTTGIVTSSPICRKRPASDFLPINAEIKRIGVEVPENEVNQVRSDVRRISPILVSLRERTLGEISLSSDSCLFDNTGTSSISRCIPRNNSLLEETFTSGGGCTCRLTMNNVSLDSTSFETNGEVEVVGCSESEDRVCRATTATPSQGGECANEGVNKTPMDVKLNYTDSFIDESSCCSLPRDSPERNLKSYQEPKQCEKPIELCPCSDTVSMNESFMKKSMDQFTETSMSTFPRLMVSLERIEVTPDKKEKKRVIGNNGNNNSSSKKQKKSEATDEVDVRIETADTLEECCFVDRCADENKNVEKTEQEKQVDSSVVSRPEETSQVQLQSPSVNAIKKCRVILERVTVPKLDTTTDVQKSKNEEEASSSVAEKLAGDENTVFSSPLPSTENVQPLNNIDATEETTPSSPEEILEPSADVPETIDTETETETGSDSSEISSMTNVRLGGCDDDAVSDQISCQESESMCCVDINPEIISRLEPERPEAFTEDSAESLALATGAPDEVRSDGSDSGLGSEIPGDTGPAPVPESDSETSFLDRIPDDILSDKEKAVNQLDSFVPAVGVPGTPQTPLTNFPSPPKSNLKRRLTDCMEGAPSPKRSSTEESMKKKRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERAANCVSEAASSSEDPSDDTDEEQSDNEDLDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRMGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKHREEEEGADHDASDNQNGRSPLREINLGSVMENRNGESCLNGGGFTTLHYENHDARDGGANCQPEVPGTREDSLDLYAIRDDCYPSEDTVDGTQGPSRKLHPEFSQAFQTFSGQTSAGVNFQQPTYQDYQPYANLPSTSRVQFQPQFQTVPGNPGFSHYAPYGQDNTGTIQGNCQVHPGQHSSSYEASFAQDETTGSQYTNLNSVQPMNTVVQQMGKLEPFSELLSGRYSYYGEMEPQTHGTYHGNGTKVEVEKSQGNEQQSESTEECDENFGEIIKKSMVETVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00118002;
90% Identity
-
80% Identity
-