Gvir000952.1
Basic Information
- Insect
- Gymnocheta viridis
- Gene Symbol
- CSRNP3
- Assembly
- GCA_956483585.1
- Location
- OY101440.1:5402621-5406660[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.12 4.8e+03 -1.6 4.5 81 103 58 80 13 140 0.50 2 4 0.23 9.7e+03 -2.6 0.7 81 124 232 274 197 278 0.53 3 4 0.55 2.3e+04 -3.8 1.0 80 111 323 342 304 377 0.44 4 4 1.2e-94 5e-90 302.4 6.5 2 218 484 686 483 686 0.92
Sequence Information
- Coding Sequence
- ATGTTTTCAcccattaaaaactttataacaTTCATACAAAAGAAGAATGCAAGTAGTAATTCAATACTTGGTGAAAATATCACAACAGAAGAATTATCAAAAATGGaaacagaaaacttaaaaatagaaGCTGTTAATGCAACAAACATACAAAGTGAAAGTGAAATTACAGAAGAAATCGACAAAGAAGAAGATGTTTCAAAAACTGAAAAGAAAGACATGTGTGAACAGAATAAAGATTGTAGTCCAGACATAAATGATTCCGAAACTAAGACTAGCAAGTTGTCTTCTGTATGCATAGAAAATGCGTCTGAAGTCGAAGATGATGACATTGAGGAACAAATTGAAAGTAGTATTATGTTGAAAAAACCAGTTAAAGTTACAGCCACAAATACTAGAGAAATTTTAGAATTGAAAAAGTCATCAAATGCTAAGGGCAATATTGTTATAAGCCATGATTTTAATCGTAATCAGGCTTTGAGTCCAATAGATGATGAATTGGAAGATTTTAGGCATGACCCCATGGAAGCATTGGGTACAACTTCATCTCCTTGCTCTAATCAACCGGATGATGAGTTTTGTTCAGTGGAAAGCGCAGAAGATGCTTTAGAAAAGGATTTGAAAAGCTTAGACGATATTCCAACCGAAGATGAAGTGGAAGAAGTAGGCGACAGCAAAACTGTGGCTGATCAGAAAGGAATGGTTGACTCAGACCTAGAAGTTGAGgaagaaaattatgttgaacaaaacaatattatcgAAATTGAAGATGAAGAAGAGCCATATTTAGATTTGGCTAATTTTAAAAataGAAACGTAATCGTTTTAGACGAGGTAGATTTGAATGTCACCACCACTTCTGTTGACACGAACAACACGTCTGATGACCCCTTAGCAATAGTTTGTGAAGAACAAGAAGCATTCGTTTCCGATAAAGCTAATACTTTAGAAGaattcgatttaatgaataATGGCCAAACTTCTCAAGATGAAGATACGAGAACAACCACAGATGAAGATTTGAACTGGTTAAAAACCGATCCTGAGAATGACCAACCATCATGTAGTAGAAAAGTTAACGAAAACATGCCGGAAGTCACCTCCGAAAAAGAAGAGCGTAATGGTGAGGGTTCAGATTCCGGTTTAGGCAGCGAAACATCAGTCCTACATACCAGCACCTGCACAACAGGTATAACAGATAATAGCCATTTGAACATAACTACAGCGACACCAACGCCAACTCCTACTCAGATAAAAGCAACAGAgagtgaaaacattttaaactcaAATGTATTGCCACTATCAAAATCACCACCAAAAGACCACCACAAGCCATATCGATCAAATTTAAAAAGACGTTTGGAAGTTGACGACGAAACTATTGAAAGTATGGCTTCTCTAACATCCACAGGATCTTCGCTTAGCGATCACGGCAGCATACAAAAGAAACCAAAGCGTTCTATTAATTTCGATACAGTAGACGTTTATTACTTTCCACGTCAACAGGGCTATAGTTGTGTGCCCTCGGCTGGTGGGTGCACTTTAGGCATGGGAGCTAGGCATATCgcctataaaaatttaactttagcCGAACATGCAGCCGAGCTCCGAAGAGCTCATCGTATGCAGTTACAAGAAATTAATCCCAGAGGTAGTTCTAGCGACGAAAGTGAAGAATCTGAAGAAGATTATTTAAGTGAAGGTAGTGGTTCTGACTTAGATGGAGAATCAAATGGTTTCCTACAGCCTGTCTCGCCAAAGCAACGAAGAGCTTTGCTTAAAGCAGCTGGTATACGTAAAATAGACCCCAGCGAAAAGGCTGATTGCCGCAATATTCGTAATAGCCGAGAAGTTTGTGGTTGTACGTGTCGGGATTTCTGCGATCCCGAAACCTGTGCTTGTTCTCAATCTGGCATTAAATGTCAAGTTGATCGTGATATGTTTCCATGTGGCTGCTCTCGTGATGCTTGTGGAAATACAATTGGACGTGTCGAATTTAATCCGACTCGTGTACGTACCCATTATATACATACCTTAATGCGCTTAGAGATGGAGAACCGCCAACAACAAAATCCTTACTCTTCTGCCGTTGCCTCACCCATACAACCAACACCTTCCTCGTACTACCAAGCCCATTTGCAGCCACAATCGAATTACAGTTCAGGCTATGCATCACCTGCTTACAATAATGCCTCTGAAATACTTCAACAATCGGCTGCCAATTCATACTATCACGCGCAAAACCCTTCCACACCAAATACTCTATATGGACAACAAACATCCTTAGATATGGCACATAATGGCAGTGCGAATTCTACTGCAACAACACCGCATTATGGCATTGATAGCTTGGATACAAGTATGTTTGGGGGCAGTACCGCAGCAACTTCTTCATATGGAGAATTAATGCCTGTGTCCTCGTATCATtatgaaaatatgcaaacacAAGCATCACCATACAATACGTATCACAACACGCCCTACATAAACGCTGCCAACAGTAACGCTACATCCCTTAGCACATCTAATACATACAGTTCATGTGCTGTTCCCTCTATACCACCCTTTGGCACAGCTACAACTACCGAAGCTACAGGAACTTATCACAGTGTAAGTAGTCTGACTAGCTTAGAGAATACTACAATACCGTATTGCAGTGCTAATGGTACCACATCATTAGAAAATGATGCCAGTGCTAATTTTATAAGTCTGTCAACACCGCTTGCCAGTTCCTCAAGACTATCACAAATAAATGATTTACTACAACATAATCGAAATGCAGCAACAGCCCTCGTGGCAGTTTCACAAAGCATTAAAGCCACAGAAAACAAACCTGCCTCAGCAGCATATGTTGCACCAGTCAATGGTTGCAATTTTCAGAGAGCTAGCTCATCTCTGAATACATCCGCGGCAGAAGATGTTCACAAAAGCTGTATTGTATTTGAAGAACTAAAGCCGCCTTTAAAGCCGGTGCCCCCAGTTGTCGTTAACGAGGTTTACCACCAAGCTGAACCAGTTAAAGCAACAACATTAATCCTCCCAACAGCAAACGCAGAAACTTTAACTAAAAGTAAACTAGAATCACAATCTTTATTAAATTCAGAATTTTCACCACAAACTTCTTTGTGTGGAGATGACAATGAGAGCAACATCGTGGCGGTAAGTCCAACTATTAAAGCTTCAACTAATGAGGTGACAGCTGACAATTAA
- Protein Sequence
- MFSPIKNFITFIQKKNASSNSILGENITTEELSKMETENLKIEAVNATNIQSESEITEEIDKEEDVSKTEKKDMCEQNKDCSPDINDSETKTSKLSSVCIENASEVEDDDIEEQIESSIMLKKPVKVTATNTREILELKKSSNAKGNIVISHDFNRNQALSPIDDELEDFRHDPMEALGTTSSPCSNQPDDEFCSVESAEDALEKDLKSLDDIPTEDEVEEVGDSKTVADQKGMVDSDLEVEEENYVEQNNIIEIEDEEEPYLDLANFKNRNVIVLDEVDLNVTTTSVDTNNTSDDPLAIVCEEQEAFVSDKANTLEEFDLMNNGQTSQDEDTRTTTDEDLNWLKTDPENDQPSCSRKVNENMPEVTSEKEERNGEGSDSGLGSETSVLHTSTCTTGITDNSHLNITTATPTPTPTQIKATESENILNSNVLPLSKSPPKDHHKPYRSNLKRRLEVDDETIESMASLTSTGSSLSDHGSIQKKPKRSINFDTVDVYYFPRQQGYSCVPSAGGCTLGMGARHIAYKNLTLAEHAAELRRAHRMQLQEINPRGSSSDESEESEEDYLSEGSGSDLDGESNGFLQPVSPKQRRALLKAAGIRKIDPSEKADCRNIRNSREVCGCTCRDFCDPETCACSQSGIKCQVDRDMFPCGCSRDACGNTIGRVEFNPTRVRTHYIHTLMRLEMENRQQQNPYSSAVASPIQPTPSSYYQAHLQPQSNYSSGYASPAYNNASEILQQSAANSYYHAQNPSTPNTLYGQQTSLDMAHNGSANSTATTPHYGIDSLDTSMFGGSTAATSSYGELMPVSSYHYENMQTQASPYNTYHNTPYINAANSNATSLSTSNTYSSCAVPSIPPFGTATTTEATGTYHSVSSLTSLENTTIPYCSANGTTSLENDASANFISLSTPLASSSRLSQINDLLQHNRNAATALVAVSQSIKATENKPASAAYVAPVNGCNFQRASSSLNTSAAEDVHKSCIVFEELKPPLKPVPPVVVNEVYHQAEPVKATTLILPTANAETLTKSKLESQSLLNSEFSPQTSLCGDDNESNIVAVSPTIKASTNEVTADN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -