Gvir029928.1
Basic Information
- Insect
- Gymnocheta viridis
- Gene Symbol
- CAMTA1
- Assembly
- GCA_956483585.1
- Location
- OY101443.1:71806523-71813904[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.4e-15 9.9e-11 42.6 0.1 78 116 10 47 1 47 0.87 2 3 0.24 9.9e+03 -2.6 0.5 68 95 259 286 236 300 0.67 3 3 0.32 1.3e+04 -3.0 0.5 46 63 548 565 505 573 0.46
Sequence Information
- Coding Sequence
- atgaaaattaaaactgaagGAGTTGGTCGGTTTTGCATCTATGGTTGTTATGTACATTCTGCCATATTGCCCACATTTCATCGCAGATGTTACTGGTTGTTGCAGaatcCTGATATAGTTTTGGTTCATTATTTAAATGTGCCATATCCAGATGATAATAAAATGGCTGTTATTGCACCCAGCATCAGTTTGTGGGGTGATAAAAAGGAGTGGACTAAAGAGGAACTTGTTAGTCAGCTGAAACCCATGTTATCCACTGTGACATCGGATGATGAATCCGATTCCGGTAATGACATAGAGATATCGACTGCCGAAACTGTAGAATCAATAGTCTGCCAACTAATGGAAAAACAACGTCTATCACGACAAGCAGCTCTTGTCAAGCAATTAGATTGCGGCTGTGGCGATGCATCCTGTGCTGATGGTAAAACTTGTACGCATCCGGTTATGCGACGGCCGAGTTTAATCAAAGCTAGCAATGAGAAACGTTTGCCAGCTACAACTGCCGTGGAACCATACAATCCTAATAATACACCAAATGTTGTAGTAGGACCCAAGCTCTACTCACGCTGGGCGGATAAAAGAGCAATACGCGAATCCTCTAACGGTATGGATACTAATGGGTATCAGCATCATCATGGTCATGGACATCATGGCCAGACTCAACAGCTGACGCAAGAGTCGGCCATTAAGTTTCAAATTATACCGCCACACAACGAACAGCAGCAGCACTATCGACATAATTATAATGCAAATGGTACTAATTCATCGGTAGCAAATCATCAACAATTGATAGCAAcgagaaataatttaattatgcagcatcagcaacagcaacagcaacaacaacaaatgcatacaaatcaatcaaatttcaatcaactacacaaccaaaataataataataatagtaaccACAATCCAAATAATAACAACACCAGTAGCAATTTACAACGCTACGCTGCAACAAATAATTGCAATGCCACtgtgcaacaacaacaacatcgtttccaaatagcaaaaacaacaattacTGCAATGgataataacacaaataatcaacagcaacagcaacatcaacaCAACAACCATAATTCAACTTCCGTTTCCCCAAGCTCCACCAACAACGGTGGTTTGGCAGTGGGTGGTAGTGGTGAAATTGCTGTTGATATGTTGAATACACAAACTCATTCTCATCACACTCTTCAACAACATCCGAATCAGAATCAGGCGATGAGTACAACGAATtctaatacaaataataaaattaaccaCAACACAAATATcacaagcaacaacaacaacaactgcagCACCGGTAACCACAATACCACAAACCAGAGTTCACATTCAAATCAAgctataacaacaacaacaacatcttcGACACCAGTAGCTGTAGCAACAAACTCAACTTCTACTATTGTAACAACGACAGCTACAGCACAATCGATGTCAAcatctcatcatcatcatcaccatcagcagcaacaaaatgatttaaatgtcataaataataataataacacaataacaaaatttaataattacaatcaACAGCAATTAAATGCTTCCAACAACagtaataacaataattcaCCAAATTCTCATACTGCAACCCAACAAAAACATCCTTTACCACAAgaacaatattataaattgcAACATCataaacaacagcagcaacagcaatcACAATCAACTTCTAATGCTGTAGCTGCCACCTCAGCTGTTGAACCCATGTGCATGTCACCGGAACATCAGCGCTCACCTCAATCCCTActgaaacagcaacaacatttaataatttcacCTTCGGACTCAATATCCGATTCAGCATCTTCGATTTCATCATCGTCGTTGTCCTCATCTTCGCAAACATTTATGGACGTAAATCAAAAATCTACTTCCCCTGCGGTTGTCAATAGTAACTgtaatagcaacaacaataataatactgAAAACGCAGAgaggtttactgagtttcgttgtgACCGTTCAAGCACAATTGATGTCAAACGTACAGATCGGCCAAAAAGGCTGTTAACATCCATTGAACTGGTATTGGATGATTGGATAATGAAAGTACGTTACATGGTTGAGAATTTAGGCATCTCAACCGAGCGCCTTCGTCacattttgaatgaaaattcgGATATGGAAAAGCTATCCGAGGCATGGGTAGCGGGACTGCTCACACTGGACCATAAACGGTTGCGTTTATGA
- Protein Sequence
- MKIKTEGVGRFCIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSISLWGDKKEWTKEELVSQLKPMLSTVTSDDESDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDASCADGKTCTHPVMRRPSLIKASNEKRLPATTAVEPYNPNNTPNVVVGPKLYSRWADKRAIRESSNGMDTNGYQHHHGHGHHGQTQQLTQESAIKFQIIPPHNEQQQHYRHNYNANGTNSSVANHQQLIATRNNLIMQHQQQQQQQQQMHTNQSNFNQLHNQNNNNNSNHNPNNNNTSSNLQRYAATNNCNATVQQQQHRFQIAKTTITAMDNNTNNQQQQQHQHNNHNSTSVSPSSTNNGGLAVGGSGEIAVDMLNTQTHSHHTLQQHPNQNQAMSTTNSNTNNKINHNTNITSNNNNNCSTGNHNTTNQSSHSNQAITTTTTSSTPVAVATNSTSTIVTTTATAQSMSTSHHHHHHQQQQNDLNVINNNNNTITKFNNYNQQQLNASNNSNNNNSPNSHTATQQKHPLPQEQYYKLQHHKQQQQQQSQSTSNAVAATSAVEPMCMSPEHQRSPQSLLKQQQHLIISPSDSISDSASSISSSSLSSSSQTFMDVNQKSTSPAVVNSNCNSNNNNNTENAERFTEFRCDRSSTIDVKRTDRPKRLLTSIELVLDDWIMKVRYMVENLGISTERLRHILNENSDMEKLSEAWVAGLLTLDHKRLRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -