Gvir012539.1
Basic Information
- Insect
- Gymnocheta viridis
- Gene Symbol
- RCOR3
- Assembly
- GCA_956483585.1
- Location
- OY101441.1:71180737-71190023[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.72 1.8e+03 0.3 0.3 32 44 121 133 113 134 0.73 2 2 9.2e-13 2.3e-09 38.4 0.0 3 46 233 276 232 276 0.97
Sequence Information
- Coding Sequence
- ATGGGTTCTTATAGGAATATTATTATTCATAGAACTTGGgaTCAAACCTTGCCATCATTACAAGCAGGAAATTTAATTGACCAAACACATGATGCCGCCAATTACAATGTTTTAGGCCAAAGTAGTGGAGGTGGTGTTGATAGCGaatcgaataatttttccaataatattGCCAATAAGTTGCATTCTTTAAATCCGTCCCATATAAATAATGATTCCATAAATTTGAATGGCGTTCAAAATGCTGCCAATACAAATAATACATCGTCTATAACTTCTAACTCCTCCTCTTCTGCAAGTGCCGCCGGTTATTGTTCAAATTGTGGTGTGGCCTgtaatatattgaataattcGCCACATGGTAAACTATGTTCCAGTTGCCATCATCATTGGAGACGCACTGGCAATAAACGACCCACTTCGGGCCCTTATTTTGGCAAAAAATCTCGTGACCGAAATGCTGATCGACATAAACGCAAGCCGCCGCGTGGCATGTACATAAATCATGACGATATTGTTGCTCTGGCTAGTGCAAATGACAATCAAGATGAATTACTGGCAAATATTGATCGTGAAATTGTCTCCTTATTAAGTCAAGTACaattgaataaacaaaacatttcggCATTAAAACGTAAAAACTCTGATAATTTGGAAGAGATACGTCCAAATGAAAATACAAATCGAATTAATGCACGATGGACTAATGATGAAATTTTACTTGCTGTACAGGGAGTTCGAAAGTATGGTAAAGATTTTCAAGCAATTGCTGAAACTCTAGGAACTAAAACAGAAGCTcatgtaaaaacattttatgtaaaTCATCGTCGTCGCTATAATTTAGATCAAATCATTAAGAAACTTGAGGCCGAAAAAGAAGCTAATGCACCTGCAACATCGGCTATTACTACCTCATCGCCATCATCGTCTTTGCTTGCCAACAATAGTAGTAGTAACTCCACAAACTCTGAACAAATAATAATTgtcaacagcagcaacagtttaaaaaaagatgatTCAGCCACAACCAGCACTCaaataaaaaggaaagaaaTCGTACCTAATAGTCTTAACGAAGAATCAGATAATACAACTTCAAGTGAAACTGCTATTTCAAAATCAACCATTTCTACCATCACCACAAACACAGATGAACGTAAAAGTGAAAGTAGCTTAAGTGGCGTAATGCCTGCAAAAGATAACATTATATTGgagatCGATTTAGATGCTGAACAACCAGAAATACAACCACCTTCAGCTAAAAAGATTGCCTTGAGTGTTCCAAACCAGGATTTTCCTAAATCAAgccctgtttaa
- Protein Sequence
- MGSYRNIIIHRTWDQTLPSLQAGNLIDQTHDAANYNVLGQSSGGGVDSESNNFSNNIANKLHSLNPSHINNDSINLNGVQNAANTNNTSSITSNSSSSASAAGYCSNCGVACNILNNSPHGKLCSSCHHHWRRTGNKRPTSGPYFGKKSRDRNADRHKRKPPRGMYINHDDIVALASANDNQDELLANIDREIVSLLSQVQLNKQNISALKRKNSDNLEEIRPNENTNRINARWTNDEILLAVQGVRKYGKDFQAIAETLGTKTEAHVKTFYVNHRRRYNLDQIIKKLEAEKEANAPATSAITTSSPSSSLLANNSSSNSTNSEQIIIVNSSNSLKKDDSATTSTQIKRKEIVPNSLNEESDNTTSSETAISKSTISTITTNTDERKSESSLSGVMPAKDNIILEIDLDAEQPEIQPPSAKKIALSVPNQDFPKSSPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00435463; iTF_01174159;
- 90% Identity
- -
- 80% Identity
- -