Gvir017083.1
Basic Information
- Insect
- Gymnocheta viridis
- Gene Symbol
- -
- Assembly
- GCA_956483585.1
- Location
- OY101442.1:4275297-4277604[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.3 3.3e+03 -0.5 0.0 9 43 156 196 153 199 0.75 2 5 4.3e-12 1.1e-08 36.3 0.1 1 44 205 249 205 251 0.92 3 5 0.00024 0.59 11.5 0.1 2 43 260 305 259 308 0.82 4 5 6.2e-14 1.5e-10 42.2 0.0 3 46 317 361 315 361 0.93 5 5 6.8e-06 0.017 16.4 0.1 3 45 369 412 367 413 0.96
Sequence Information
- Coding Sequence
- ATGACTGGAAATAATAATCTTGCGATGAAAGCTCAATTGGAAAAAACGTTAACTCATAATAGCCAAATGCAGAGCGAACTTCTGGTGATGCGGGTAAAACTCGAGAAGCTGCTGTCAAACGTAAAAGAGACCTATAAAGCTAATGAAGTTTTGCTCAAGGAAggtgttttaagaaaaaaaagcatTGGAGTTGGAATGAAAGGAGCTTATTTGAAAGGTGGAACTTTCTACTTGAGAGGAAATATGTTTTTCAGGGACATAAAATGTCGTACTTGTCCAAATAATGAAGattataaaaagagaaaaatgcaAAACGAAATGTTTCCGATGGATCTAAATTTAAGAGCAAGACACGTTTGGTCTACTACAGATAAACAGGGAGTTGTACTGGGTATCAAGGAGCAAATAGTAGATTATCTGGAACAATCTTCTAAGCGTCATggtaaaaaatgtaaagaacTAGATAGTGAAAAGTtgacaaaacttttaaatatgatTCCCGATAACTTTCGTATTGACTGGGATTATATATCAAGTAGTAATTTGGCACACCGTCATTCTGCCAAAAATTGTGAAGCTATTTGGAATTTATTTCTACATCCGTCTTTAAATCGTTCTGCCTGGTCTGAAGAAGAAAATCTTAAGCTTTTGGAAGCAGCCAAGAAGTATGATTTTCAAAATTGGCAAGCAATAGCGAAGGAGGTTGGACAACGGTCAGATTTTCAGtgctttgtgcaatataaaaataatgtatttcaAGTTTTGCCGGAATCCCACACCAAATGGTCAAAAGAAGATGACAAGCGTCTTCTTGATGTTATATCTAGAAATACTGTAAATGGTAATATCAATTGGAGCATTGTGAATACATATTTTCCACACAAAGCCAAGACTACATTACATTCCCGTTATAACTTTACTCTTAATCCACATATATCACGAGGTGCTCCTTTTACGCCTGAGGAAGATCTACTTTTAATAGCCGCTGTGAAAGAGTACGGGAAAAAATTTAGTTGCATACCACGTAGTCTATTTCCCAATCGATCAGTGGTTCAATTGCGTAGCCATTACAATAACGTTTTAGCTAAACGACATAAACATCATCCATGGTCTTTAGatgatgatattaaattaatggCTTTTGTGACAGAAAATGGCACTAAGTGGATGGATTGTGAAAAGTCGTTTAACGAAAGACATACTCGACTCAGTTGTCGGACACGAtatttgacaattaaaaaatatcttgaaaaaaatCCAGATGGTGGCATTGAGTGTTTACCGAGAAAAAAgtctagtaaaaaaaaatctgtaactATGAACAATTGGAAAGAAAAAGTTGAGGAATTTTCCTCAAACACAAACGTTGCgaaacaaatatcaaaaaataaaatacaaaaaaaagtaggAAAAGAAAAAGTGGCAAAAAAAGAGAAGgttaaaaggaaaattaaagcccaaaataatttagaaaataatgtaaagCCTTATATTCATCggttaaaatcaaatgaaagaaaaaattataaatttttcaaatacgcctacagttttgaaataaatagacATCCCTGCGACAATGTAGAGATAAAACACGAAGATTttacaatggttttatctgcaTTAAATCCCCAAATACCTTTCTATAATTTCGATTCAAGTATACCACAGCATGTCAAACAGAATATAATAAATCGCTCACCACAATCAATATGTTGTGAAACACTTAAACTTTTACCTCCAAATTGGTCTACAGGTATTGGGTTCCGTGCATTGTGCATAAACACGGCTGACGTTGCGAACAATCTGCCATCTAAGACTCTTATGTATAACACCAACAATGATTATATTAGTAGATTTCGCGAACGTTTGCGGTTCCTTTTTTACTCAACAGCTCTACTCAGTCGATTAGATCCAGGTATGTGGGGAATAAGCACAATTGAAAATGAAGAAATACCAGAAAAGTTCAAACGAAAACGATATCGTACTTTAAGAGATAAAGAGAGAAAAGATGACGAGCGTGGAAATAGTGAAAACAAATGtattagttttattgaaaatgtagaAACTggattaaaaacacaaattgcattaaaaaataaagaatag
- Protein Sequence
- MTGNNNLAMKAQLEKTLTHNSQMQSELLVMRVKLEKLLSNVKETYKANEVLLKEGVLRKKSIGVGMKGAYLKGGTFYLRGNMFFRDIKCRTCPNNEDYKKRKMQNEMFPMDLNLRARHVWSTTDKQGVVLGIKEQIVDYLEQSSKRHGKKCKELDSEKLTKLLNMIPDNFRIDWDYISSSNLAHRHSAKNCEAIWNLFLHPSLNRSAWSEEENLKLLEAAKKYDFQNWQAIAKEVGQRSDFQCFVQYKNNVFQVLPESHTKWSKEDDKRLLDVISRNTVNGNINWSIVNTYFPHKAKTTLHSRYNFTLNPHISRGAPFTPEEDLLLIAAVKEYGKKFSCIPRSLFPNRSVVQLRSHYNNVLAKRHKHHPWSLDDDIKLMAFVTENGTKWMDCEKSFNERHTRLSCRTRYLTIKKYLEKNPDGGIECLPRKKSSKKKSVTMNNWKEKVEEFSSNTNVAKQISKNKIQKKVGKEKVAKKEKVKRKIKAQNNLENNVKPYIHRLKSNERKNYKFFKYAYSFEINRHPCDNVEIKHEDFTMVLSALNPQIPFYNFDSSIPQHVKQNIINRSPQSICCETLKLLPPNWSTGIGFRALCINTADVANNLPSKTLMYNTNNDYISRFRERLRFLFYSTALLSRLDPGMWGISTIENEEIPEKFKRKRYRTLRDKERKDDERGNSENKCISFIENVETGLKTQIALKNKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -