Gvir010015.1
Basic Information
- Insect
- Gymnocheta viridis
- Gene Symbol
- Myb
- Assembly
- GCA_956483585.1
- Location
- OY101441.1:15596408-15598954[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.4e-12 5.9e-09 37.1 0.2 2 46 51 95 50 95 0.96 2 3 4.8e-21 1.2e-17 64.9 1.7 1 46 101 147 101 147 0.98 3 3 2.4e-21 5.8e-18 65.9 1.1 1 44 153 196 153 198 0.96
Sequence Information
- Coding Sequence
- ATGAGCTTTGAGTCATATTCTGTATCTATATGCCAAAGGGATAGCGCCGAATCAGGAGAATCTGAGTATTCAGATATCGATGGCAGATGTGATGATGATGCCAGTAGTATTAGCTCCCGTAATAATAATTGCGCCACGGGAGGATTTGGTAAGCGTTGGTCTAAATCGGAGGATAATCTCCTGAAGAGCTTAGTGGAGCAGTTTGCTGATAGATGGGATCTTATAGCACCATACTTCAAAGACCGCACAGAACCTCAGGTCCAGCAGCGATGGGCTAAAGTTCTAAATCCCGAACTAATTAAGGGACCTTGGACTAAGGAAGAGGACGAAAAAGTAATGGAATTAGTAAAACGTTTCGGTCCCAAGAAGTGGACTCTTATAGCACGCTACCTTAATGGACGCATTGGTAAGCAATGTAGAGAACGGTGGCACAATCATTTGAACCCAAATATTAAGAAAACTGCCTGGACGGAGCAAGAAGATCGCATAATATATCAAGCACACATGGAATGGGGTAATCAATGGGCTAAAATAGCTAAACTTTTACCAGGACGTACAGACAATGCAATTAAAAATCACTGGAATTCCACCATGCGTCGAAAATACTATGACAATGAACGTAAATCTGCACGTCCCTTCTCAGATTTGAAATCTTCACGTTCTCATCTTAAAACACTTATTAAATCGGGCGCGGCAATGACACCGGCCTTAGTACTGTCCGCGCAAATATTACAACGCAATGAAAATAAGAACATTCCGGCCGAAACTAAGCCTAAATTGGCTAAAGTATCCTCCAGACCCGCACCAAATATTCTTAAAAGAGCAAAACtacaaaaccaacaacaaacaaatgattttaatttgaacaGCCATCATTTGATTCATACAGGCATGAAACATGATGTAAAATTACCCGACTCACCTGTTATAACGCCCATTAAAACTCTACCCTTTTCACCAAGTCAATTTTTGAATTCACCCTGTTTAACTACATTCGAAGATATGAATTTACATGCCAGTACACCTGTAAATAAAAACCACAATCGGTTGGGAGCTGATACGAAAAAGGAATTGGATTCTTCTTCCATAGAAACTCCACACAAAAGCTTGATTGGTCCTCGTACACCAACACCGTTTAAAAATGCATTGGCTGCTTTAGGCAAGAAACGTCGTGGCGAACGTTACATTCCACCAAGTCCCTCCAGTTTAGTTGAGGATCTGGCCGAAATAATTCATGATGAACAGTTAAATGATACTAATCAATCAAATAAAGCAGCTGGTAAAAAGGAAAACATACCTGTCTACAAGTATATGTCCGAAACATCAGCTGGAGTCAGTGCTAACAACAATCCGTTGCCACCACCGACAAAGAAAGCCCGCAAATCCCTCATTACCTCTTGGGGAGAAAACGTAATGCCAACCAATAACGCCTCTGATGcaaaaatggacaaaaaagcGCAACCATTCGAAACAGAAACTcccagtaaatttttaatagcggGTGAATCCAGCATTATGAGAGATACACTGTGTAGTGAAAACGATTTGCTGCTCGATGATGATGAGAATAGGGATGAAGaggctaaaaaagaaaataaaccacAGCAGGACACTGTGGGAGCACGCCAGCGAAATTCTCAACATTTTTTAGATCCGAAATGGGAGAAAATGGCATGTGGTCAAACCAAAGATCAACAATATATGGTGCAGCAGGCACATGCATGTCTTAAGAATCTCGCCTTAATGCCCAGATCattgaattttgaaaagcaaaaatag
- Protein Sequence
- MSFESYSVSICQRDSAESGESEYSDIDGRCDDDASSISSRNNNCATGGFGKRWSKSEDNLLKSLVEQFADRWDLIAPYFKDRTEPQVQQRWAKVLNPELIKGPWTKEEDEKVMELVKRFGPKKWTLIARYLNGRIGKQCRERWHNHLNPNIKKTAWTEQEDRIIYQAHMEWGNQWAKIAKLLPGRTDNAIKNHWNSTMRRKYYDNERKSARPFSDLKSSRSHLKTLIKSGAAMTPALVLSAQILQRNENKNIPAETKPKLAKVSSRPAPNILKRAKLQNQQQTNDFNLNSHHLIHTGMKHDVKLPDSPVITPIKTLPFSPSQFLNSPCLTTFEDMNLHASTPVNKNHNRLGADTKKELDSSSIETPHKSLIGPRTPTPFKNALAALGKKRRGERYIPPSPSSLVEDLAEIIHDEQLNDTNQSNKAAGKKENIPVYKYMSETSAGVSANNNPLPPPTKKARKSLITSWGENVMPTNNASDAKMDKKAQPFETETPSKFLIAGESSIMRDTLCSENDLLLDDDENRDEEAKKENKPQQDTVGARQRNSQHFLDPKWEKMACGQTKDQQYMVQQAHACLKNLALMPRSLNFEKQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01201536;
- 90% Identity
- iTF_01137938;
- 80% Identity
- -