Gvir027149.1
Basic Information
- Insect
- Gymnocheta viridis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_956483585.1
- Location
- OY101443.1:32312923-32313309[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-11 4.2e-08 33.9 0.0 2 40 14 52 13 54 0.92
Sequence Information
- Coding Sequence
- atgacGACTAAGGGAAAAAGATGTATTCACAAATACTCAGAACAGTCACTACAAGACGCATTGTGTGATATAAGAACAGGTGGGATGTCAATACTTGGTGCAGGCGTTAAGTATGGAGTTCCTCGTTCAACCATACAGAACAGAATCCATGGGCGCATTCTTGAGGGTCCTAGACGAATGGGTCCACCAACAATTTTGACCATTGCTGAAGAAGAACGCCTTGAGCAGTGGTGCAACGACATGGCAAAATGTGGCTTTCCATTAAAAATTGATGACCTTTTAAACACAGTTCAGGCCATTCTCAAGGAGGACAGACGATCCACACCGTTTGCAAACGATCGTCCTGGCAGAAAATGGTTTCAcagttttctaaatatttgtatgtaa
- Protein Sequence
- MTTKGKRCIHKYSEQSLQDALCDIRTGGMSILGAGVKYGVPRSTIQNRIHGRILEGPRRMGPPTILTIAEEERLEQWCNDMAKCGFPLKIDDLLNTVQAILKEDRRSTPFANDRPGRKWFHSFLNICM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01174150; iTF_00370929;
- 90% Identity
- -
- 80% Identity
- -