Gvir006901.1
Basic Information
- Insect
- Gymnocheta viridis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_956483585.1
- Location
- OY101440.1:91799000-91830224[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-14 1.9e-10 41.5 0.0 1 45 343 388 343 388 0.97 2 2 1.8e-18 4.2e-15 56.3 0.0 1 43 812 855 812 857 0.95
Sequence Information
- Coding Sequence
- ATGGGGCGCAGGAAATGGAAGCAATATCAAGAAACATTAATGCGAACCCACTTAAATTCCGACCAATTTGTTGCATCAATCGAAGACAGCAATATCGAACTGAAGAAAGAgctggataaatttaaaaacggtGAATTTATAGAAATCAgtgaaacaacagcaacaaaaataatagagaACTCAAAACACGAAGAGAACCACCACCTTATACATAAAGAGCAAAATAtattacaacaacagcaaaaggAGCAAGAGTGCGAAAACATCAAAGATCGACAAAAATTAGATAAAGAAGAAACGCAAGCGAATAAACATCACTTTATAGAAGAAAATagcaaacaaactaaaaaagaagtagaaaaagataaaaattatacaacagATAATAAAACagTTAAAGATTTgaaattggaaataaaatcaTCACCATCAACACCACCACCAGATCCCATCGATTGGAAACCGAATGATAAGTGTCATTTTTGTGTTAACGGCAAATTACTCACAGTGAACGCTAAAGGTGAATTAGTGGCCGAATCTGGCCCGACTGGGTCTGAAACGGACCACATACAAAGATTGGATTGCGAAAGTGATTCAAACGAATCTTCATCCGTTGCCGTGGCCCCCAATACAAATGGTAATTCACCATTGATGACTGGTGCTGTACCATTGACGGATAATAGTCAAGTAACGTTAAATAAGTTACTTACGCAAAAAATGGCTTCAATGGATTCCGTAGCAGCACAGTTTGCCGCTATACAATCAATATTACCAAATTTTAATTGGATgaaccaacaacagcaacaatctCAACCAGATTCGGTTACACCAACTACCTCAGATACATCAGCCGCCGCAATAAGTCCCTCTCTAAAGGATTCACCAAGTCCCAGTGATGCCACCGGTGAACAGCCTTTAGATTTAAGTTCCAAGCCGTCTCCCAATTCATCAATTAGTGGTGAATTGAAGAGTGTTAGAATAAAATCATCACGTGCTACACCTGTTCCTTCGACACGTCGCACATACAGTGAAGAAGATTTGAATAACGCTCTGCAAGAAATCCTCTCCGGTAGATTAGGCACTCGCAAAGCGGCCGTACAATTTAATGTACCACGTTCGACATTGCGCAACAAGATTTACAAACTGACAACAGAGGCGAAACGTAATAACGAGCAAGCCTCGCCTGAGTTGTTGAAGTTGCAGCAAGAGCTAGAAAGAGACATGTCCGGTGACGAGGAAGTGGAAGTGGATAGTAATGCCTCAACGCCACAACCAGACGATGGACCCATCGCACGTATTTCCACACCAAATTTGCTTAAGAAATTAAGCATTAATAATAATGGTGAAGGTGCGGAAGTAAGCGCTCAGGCCACGCTGTTGCATGCCTCACCCAAGCCAGCTCATGCAGAATCCTCAAAACCACAAACTGCAGAGGGATTGCCTGAACATAATACACCATCCCAAATAACAGCTCTAGATGCCGCTCTACCACTTCTACTGCAAACTCTTTTGCTGTCCGATAAAAACTTAAGAGATGTTTTCAGTGCTCTGCTTCTCAATTCCACTAATAATTTGAAGGACATTTTGTTGGGCGCTACTGCAGCTGCCAACAGTGCTGCGGCTAGTGGCAGTGATAGCAGTAGTCTCAACAATGGCAATCAGCAGCAGGACTACCGTCCACTTTTACAGCTATTattgcagcagcaacagcaacagcagcagcccGCATCATTTGCTAGCGGCCGTCGCCTACCAAAGTCTGATACACCCGAAACAAACTCGTCACTAGATCCGAGTGAGGCCTGCGATGATCCTTCGGCCATATTGAAAATTCCGTCCTATACTCCAGTGGCAGGGCCTTCCAATTCAATGGGTCCCAACAGTACGCGTGGCTCTCCAGCATTAATGTGTCACAACAGCAATAGCAATTCGAACCGTAATGGTGACAGTCCCGGTCCTTTGTTGCTAGCGGCCGCTGTTAATGCCGCCCAAAAACAATTAAGCAGTAAAAATCGCTCATTAACACCACCTCTGCTGCACGGAGCAGTCGAGACCCAGCCTCCTCAGTCTTTAAGAATGAGTGACGTTATAGCCAACAGCATTCATCGTACTATGAACGAGCAAGCCAATAAGGAAGCCGTACATTCCAGTTCCCTGCTAGGCTATGCGACAAACTCTGAACGCATTAATGTAGCGGCAATGTCAGCATCTGGGGACTACAAGAAGCCAACCATATCAGTAGTAAAGAATATAGGAGGCACGGACACTTCACGCTTTGGTGCAGCTCCTAACCTGCTCGCTGCAGACCTGGTGCAACATCACCATCACTCTGCTCACTTACAACATGCCCATCACCATCTTAGTCGTCAAGAAGCAGCCGCTTTGGCTGCCGGCAAAGGCACCCGCCCTAAGCGTGGTAAATATCGCAATTATGATCGTGATAGTCTGGTGGAAGCTGTCAAAGCGGTGCAACGTGGTGAGATGTCGGTGCATAGAGCCGGTAGTTATTATGGAGTTCCACATTCAACGCTCGAGTACAAGGTAAAAGAACGGCATCTGATGAGGCCGCGAAAACGAGAGCCCAAGCCCCAACCGGGTCTGGACGGTACTAGCAATAGTTCAAAAACAAATGCCAACATTCCTGCAGGACTAACTGGTCTTGATAAACTTAAGGCCGGAAGCGGCAATTCCAATGCCAACATGAAACTCCCTGGAGCTGGCTTGAAAAACAATGGAGGCACTGGAACAACCGCATTCCCGGGTAATGGCCCAAATGGAATGAAACTGCCAATATTCGATCCCGCCTTAGCACACTTGCCCTATGCATCACCACTCTTTTGGCAACACAACCAGGCGGCGGCTTTCAGTCAGCTGCAAATGGATTTCAATCGCAATAGCACAGCGCCCTCAGCCCCTTCACCGAACGAAGCCAACAGTGACATACTCAAGAGTCACATGCAAAGGTACCAAGATATGACGGGAGGAGGCGGCGGTGGAGGAGCCAGCAGTGTGGGTGGCAATACTACAACAAACTCGTCCAATGGTCCCAGTCCGATATCAAGTCCCATACTATCTGGTCAAGATATCAATAGGGCACGAGAGCTGTACGAAAGCAATGCAGCCAATGGAGCCTCATTCCTCGATGGCATTATACGTAAAACCCTCGATCGCAAAAATAATGAAGCAAACGCTGCCAGTACTAGTGCTTCTGGTGGCGTACTGCTGGACCAATTGCTGATGAAGAAAACCCCACTACCGTTTACCAACAATCGCAGCAATGACTACAACTCACTATCTCCCTCACATATAGGAGCTATCAAACGTTCAGGTAGTCCACTCTCTCTTAGTGGCACCTCCATCAAACGGGAACGAAATTCACCGCATAGTGGTGACGACAGCGATGATGACGAAGAAACCTCCCAAAGTGGTATAGATGAGAGCTACGagaacaataacaataacaacaacaaaagtggCCATGGTGGCTTGAAAACATCATTGAGCCAACGCAGTCGCTTAGGTTCGCGTGACTCGAATTCCGAAACGGACAACAGCAGTTTGAAAAGTGAACTTCAAATGAGcaatcaccatcatcatcagcagGGACAGCACAATAATAgcaacaatattattaatgtgCTGGATATAAATGGTGGCGGTGGTGTTGGTAGCAGCAGTCTTAATATTAAAACCGAAATTCCTAACCTCGAAACGGGCACCTCTATACTACAAGAAAAACTATCACAAATCAAGGCCGAACAGcaagaaagtgaagaaaatttataG
- Protein Sequence
- MGRRKWKQYQETLMRTHLNSDQFVASIEDSNIELKKELDKFKNGEFIEISETTATKIIENSKHEENHHLIHKEQNILQQQQKEQECENIKDRQKLDKEETQANKHHFIEENSKQTKKEVEKDKNYTTDNKTVKDLKLEIKSSPSTPPPDPIDWKPNDKCHFCVNGKLLTVNAKGELVAESGPTGSETDHIQRLDCESDSNESSSVAVAPNTNGNSPLMTGAVPLTDNSQVTLNKLLTQKMASMDSVAAQFAAIQSILPNFNWMNQQQQQSQPDSVTPTTSDTSAAAISPSLKDSPSPSDATGEQPLDLSSKPSPNSSISGELKSVRIKSSRATPVPSTRRTYSEEDLNNALQEILSGRLGTRKAAVQFNVPRSTLRNKIYKLTTEAKRNNEQASPELLKLQQELERDMSGDEEVEVDSNASTPQPDDGPIARISTPNLLKKLSINNNGEGAEVSAQATLLHASPKPAHAESSKPQTAEGLPEHNTPSQITALDAALPLLLQTLLLSDKNLRDVFSALLLNSTNNLKDILLGATAAANSAAASGSDSSSLNNGNQQQDYRPLLQLLLQQQQQQQQPASFASGRRLPKSDTPETNSSLDPSEACDDPSAILKIPSYTPVAGPSNSMGPNSTRGSPALMCHNSNSNSNRNGDSPGPLLLAAAVNAAQKQLSSKNRSLTPPLLHGAVETQPPQSLRMSDVIANSIHRTMNEQANKEAVHSSSLLGYATNSERINVAAMSASGDYKKPTISVVKNIGGTDTSRFGAAPNLLAADLVQHHHHSAHLQHAHHHLSRQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGTSNSSKTNANIPAGLTGLDKLKAGSGNSNANMKLPGAGLKNNGGTGTTAFPGNGPNGMKLPIFDPALAHLPYASPLFWQHNQAAAFSQLQMDFNRNSTAPSAPSPNEANSDILKSHMQRYQDMTGGGGGGGASSVGGNTTTNSSNGPSPISSPILSGQDINRARELYESNAANGASFLDGIIRKTLDRKNNEANAASTSASGGVLLDQLLMKKTPLPFTNNRSNDYNSLSPSHIGAIKRSGSPLSLSGTSIKRERNSPHSGDDSDDDEETSQSGIDESYENNNNNNNKSGHGGLKTSLSQRSRLGSRDSNSETDNSSLKSELQMSNHHHHQQGQHNNSNNIINVLDINGGGGVGSSSLNIKTEIPNLETGTSILQEKLSQIKAEQQESEENL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00900502;
- 90% Identity
- -
- 80% Identity
- -