Basic Information

Insect: Gymnocheta viridis
Gene Symbol: JARID2
Assembly: GCA_956483585.1
Location: OY101442.1:77977788-77996078[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.2e-22 2.9e-18 67.2 0.0 6 89 1910 1991 1905 1991 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.2e-22	2.9e-18	67.2	0.0	6	89	1910	1991	1905	1991	0.92

Sequence Information

Coding Sequence: atggtggTCTCAAAAGACTCCAAGCGTAAACGCAAGGAGTCGCCTCCTCCAACGACACCACAGCAACAATCTGCGGCAGTAGAGTCATCTCCAGAAATGCCCAAAAgAACAAAGGTTCAAGCCCAACGGAAGTTTGCACAGGGGCAGAGTGCACCGCAATCGTCTTATAGTTCTATGATTGCAGCGTCATCCTCATCTAATACTGGACCAAGTACTTCATCTGAAAGTCGTGAACCACCAACTGAGATTTTGCCTAATAAGCGTCCTAAAACGGAAGATTTTCTAACATTTCTGTGTTTTCGGGGCTCTTCAGCTTTACCACCACATTTGGATTTTCTAAATCAGGGTAAAAGTAAAGAACCGGAAAGGCCGGTAAAAAAGCCAACTATAAAACCAGTGattaagaaaaaaggaaaaaagggcCGACCACCCAAGAATacgaaacaaaaagaaaaaaatgtgccTGCCAAAGAAGTAACTGACGTTAATAAAGACGTTGTTGCACCAGCAGAAAAGCTAATAAATGAACTTGatgaaaaaaatgatatacCCGAAAAAGTACAAGTTGAAGTGGAACTGGAGGAGGAGGACGACAACGAAGATGTGCCTACTTTTGCTGTGCGTAAAAGAGCAGAAATTATAGCCGATGGTAATCGTCGCAGCAATCGCAGTAATGCAGACGAAAAGTGCAATAATACTACGGGAACTTCAAAAAGACGATCAAATCGTGCAATTAAAGAATCAAGAGTTATGCTTGATCATCTATCAGGTGATGAAGAAGACGAAAATGTCTCAACGGTCGATGAGAATAGTAAAGCGCTTAACTTAGATATGGATATAAAGGATCGAAAAACTATAAAGACACCTGTGAATTCTGAAACACCCTCAAAAGAAAGCGAAACAACCGGAAGATCTCGAAAAGGAAGGCCGCCTtcaaacaacaagaaaaaggaTGCAGAAAGTAGTAAGGAAAATGAAAAGGAAGGATCGGTAAAATCAGATATTAAAGATAAAGCTCCGGTGAAGCGTCCAAGGCAAAAGGAGTCACCCATTTTTATTCCTTCTCCAGAACCATCAGGACGAATGACTAGACAAAGAGCATTTTTTGAACCCGTTAAGGTACCTCATAAAGATAATGAAGATACAGAtgatgatataaaaaaagttattactgAAGAAACAGTCAAAGAACCTAAATGCAAAGCAATTGGCATCGATGATGCAAAAAAGATTAATGCCGAAAAAGCTGAAGAAAAATTTCCATCAAAAGAGCCGATTGTTACTGATAATAAGAACAAACCAGCACAATTggatgtttttgatttttcttcggACGACGAACAACCCTtggcaaaaacaattaaattaaaaaagactgGTCCGAATAAAGCAAGTCCTAAGAAAACAAACTCCCGTGGAAAGAAGACCTCACCCAAAAAAGAATCCATTGaagaaacttataaaataaatgacaaaattGCCACAAAAGCAGAGCAAACGGAAAACGTTAAAAAGAAACCAAACGCTGCTGATGCTCCTATGCCAGAAATAGAAGAggaaactttaaaaacaaaggGCAAGCGGTCACTAGGCCCCGTTGCAAAGAATTCCAAAAAGAAGGAAAATGATAACAGCTTAAATGAAGCCGATAAGGAACTTACTCCACATTCACCGAAAAAAGCGCCAAACGCAAAACAGTCTCGTAAGAAAGCCAAAGTTGAAAGCAATGACAACACCGTAGTTCACAATGAAGCAGAAGACAATCAAGGTAGTCCTTCTAGAAATCAAAGACCGTCACGTAAAACTAAGGAAGCAGCTGCTATATACATGGGTATAATTGGTCATCGTTTGCAAATGGCAGAGGACGATGACGATTTATCGTTAAGTAGCTTTGATCGTCCAAATGTGCGTGAAatggaaaaaatggaaaatgaacTTAAACGTAACAGTGCGTCTATAGGCAAGGGATCCCCTCCGCCGAAACCATCAATATCAGTGGAGTTGCCACAACCGACAGTTGTCGCTGCCGCTAGTACCGTTGCTATTGAAGTAAAACCTACAACAGCTCGTCGAGGTCGACCACCAAAAAATCCTAAAATACCACCCGCGCCAAAACGTGAAATCGAAGGAATGCTCGTAAAGAAAGGCGCTATTGCAAAGTTGACACAATCTACCGAAAATCTAGCTGATGCTAAAGAAACCAAAACGGATCCGTCAAAAACTGGTACGGAGGACGACGAAGACTTCTTGCTCAACGAAGAACTAAACGAAACAAAACGTAAACTTGAAAAAAGCTTTAGTGATTCCGATGATGAACCATTGGCAATTAAAGCCCATGTAAAGGGCGGTGACAAAGATGATGAGGATTCTCCTAAATCCACCGGTGCTGTTGATATAACTCCTACCACTTTGCCACCAGTAAATTCTCTCAATACAATTGGCGGAGGTTTGACTAGTTTGTCAATGCTACCATTGACTACTAAGTCTTTTACTTCTACCACACAAACTCAAGCAGCACCTCCAATACCAATAGCTCCGCAAACAGCCGTAGCACCAACATGTGTTACGACTCCAGCACTAGCAACATGTTCTGCAGTAAGCGGCCCAATTAATACGATACCATCACCAATAAGCTGCAGCATTCAGCCACCAGCTCCAGTGACTCCTACATCACAATCTCCTTTTAAAAGTATCGAAAAGAAGTCTCCCGTACCAACTTCTAAGATTTTAAATGTGCCCGCTACTTATGGCATTCCTCCAGCCTCGCCCACAGGTAATATTGCAGCTGGAATAAATACAAGTTTTGGAAAATCGCCTATGTATGTACCACAATCTCCAGCCCACTATCATTCTCCTCACGCATCACATATAAGACCAACAGCAAGTTTGCCACAATTTCACGTACAATCTACGAAAAATCCCTCGCTTGTGGCACCTCCATCCAATACGGTCACCTCTCATCTAACAACTCCTCCATCACAAATGAGCGCCCAGTCACCAATAAAATATCAAACTCCTCCAACTACATATCCACCACCAATCGAGGCATATCCATCGCCAAAAATTAATCCCAATTTCTTAACGCCCAAATTTGATCGCAATACTCTATCTCGTCCAGGAAATAATACTGGAAATAATGCCTTTCCGTCACCTTCACCAATAAAATTCGATATGTCCGGCTCAAGTAGTGGTCTGCATAAGAACTCTTCACTTTCGGCACCGAATGTAACAATGAGTCCTAAGACTTTGATATCGAGCAATATGAACTTTATAGGAAATAATCTGGCGGCTTCAACTTCAGTTACCGCACAGTTGAGCAACGATCCGTTAAAGGACGAAATAGGCAGTATACTAGCGGCCAATCTAATGCCCAGCAAGGAAGAATCAGGTAAAATTTTCGGCATCGCCAGTGTGAGCTTAGCGCAAAGTTCCGGCCCCGATAATACAAAATGTACTTTGGGGAAATGCGGTTCAATCCATAAACCGGTCTTAGGTCCGGTAGTTCCAACTGAGAGTTATATAGGTGATCAACTTTCTGGTAAAGAGAGACGTAAGGCTAAAGTGAATATGACTCACGAACAAATACACAAATGGCTTATTGAGTGTTCTTCGAATCCAGATGAAATTCAGGATGATCTCGATGATGATTTCGATTCAGATTTGAGACCAAACAACTTTGGTTCCACTCCACCACCGACTCGTGACGATAAGGAAAGTACATCATTTAGTTCGTCCTCAAAAGCCACACGGGATTTGGGTAAAAGTGAAAGTGCTTGGTCCGCCAAAGGTCCTTCGCTAAAAGCCACACCGGTTGTTGCTAGCAGTGGTGCAATTAATAATAGAAGAGATGATATAAAGCCTATCGAACCCACAAGTCCCAGAATTGATGAAGAAATGGAAAAGAATTCTCCCGTTTTGAATTTAATGTTCGATAAGGCACTTGCCAATAAACAATCTCCTGTTCCAGGAAGTTCGGACGAAAAACTTACACAGTCTGATAAATCTGAGAAAAACAATGACAAAAAAGACAAAGAAGAGAAAGTTATCACCAAAACAGCAATAATCGAGACAAAAAAAGATAAAGTCACGGAAAAAGAATCttcatcaaaaacaaataaatcttcgACAGCTGGCAAACAAAATTCTAACCAAAAATCATTAAATCTAAAGAAAGCATCAACATCGCCATCGCCTGTCACAACACCAACAACCACCGCTACTAACAAACAAATccgtaaaaaaattgtaactgAGGTGACGGAAGAGAAACCATCAAATGCCAACCAAAAAGGAACCCTCAATCCTCCAGAAGTTGCAAGTACTAATTCTACATCAAATTCTATTAATCGCACTCCTAAGCGTACACTGGTCTATCAACAAAAGCAAACtccaaaacaacaacaacaacaacaacaacagcagcaacagctaCAAAAGAAAGACAGCGCTGACTTGAAAATATCGACAACTTCGAGTCATAAACGTTCTGCGACAGCATATGGCATGGCATTTTCGGTCGAGAATGAAAAATCCATATACTCGTTTGACAAAGACGATACTGAAGATCAGGAGAAGTCAAACAAGCCCTCTACGTATCGACGGCAAAGCAGAAAAGACTCTCATATCGATAACGGGATTAATACAACACCAGTTGCTCCACAACGCACACCACCGACGAAACCAAAGCGAAATGCTGCAGCTGTGGCCGAAATTGCCAATAAAGAATTGGCTGGTGGTAATTCTCAAACCAGCTCAGTGTCATTGACTCTGAGTCCGTctgaaaaaactaaattggtAAAAGTGAGCCTTGACGGCGATAAAAACACAAAGACTACGAAGGGAGGGAAAGGGGGCAAGAAAAATTCGCAAGTCGAATCAAAGCCACCTGCCAAAGACGTTGGATCCGATTCAGGAGATGGTCACACTTTTTATATACCATTGCAAGGTACTGGCACTGGTGGCGATGGTGATGGTGGTATTCAGGGTGTAGCTGTTAAATTGGGTCGTGAAGGTCCTGATGGTCCGAATCAAAAAGTTATCATGCATGCCACCCTTGTAACTAAGGCTCAAATGGGATCTAACACTAAACCACTGCCAGACACAATGAATGTCTcagatattgtaaaaaatttagtgttgagcgataaaaaaaattcaggtGCGTCGACATCTACAGCTGCTGCAGCCGCAACAAACTCATGTTCGAATAGTTTGAAAAATGTACCAATTGGAACAGTTCAACCACGATTTAAGGGTGATTCAGCTGCACAGGGTCCATCTACATCCTCTGCTGGCGGAGTAGGTGTTGGTAGCGGGGCTTTGCAACGTGTCAATTCAAATTCTTCGCTGTTTTCCGGTTCAGTTAAATCACGTAATGCAGCTGCTGCGGCGACTGCTTCTGGAGGCGGAGCGACAGGGCATggatcgaataaaaaatttaaagatgaTACACCTATTAAAATGGCAAATAACACAGCTTTCCCTCGTCATGATGACCCAACTCAAATGGTTGAAGCTCCTATATTCCGACCCTCCGAAAAAGAGTTTGCAGATCCCATAGAATTTATAGAACGCATTACACCTATTGCTGCCAGATTTGGCATTTGTAAAATTATACCCCCTGCTTCCTTTAAACCTGAATGTCGCATATCTGATGAAATGCGCTTTACGGCCTACAAccaatatgtacataaattgttGCATCGCTGGGGTCCTAGTGCAAAAGAATTAAGTGCAATTAAAAAGTACTTGGCTACTCAAAGTATCGTGATGAATCATCCACCTTGGATAGGTGGCATGGAAGTAGATTTACCTCGTCTATATCACACTGTTCAAGAGTTGGGCGGACTGAAAGAagtaattgaaaagaaaaaatgggcACGGGTTGCTGAGGAGATGTGTATTCCTAAATTGGCGCAGGATCGCATGACAAAATTAGATGACATTTATTGCAAATACTTACTTCCTTATGATACGCTCTCGCCAGCCGAACGACAAAAACTCTTTGATGAAGTTGAAGCGGATTGGGCGAAACGAGAAGCGCGCGCAAGACGTAACGCTGATCGCTTTGTAAACACTGAAAGCGTTTCCAATGAAGAAGACGATGTATCATCGGAGAATGATGAAGAAGAGTCTGAAGAAGAAGTTGATGGGGTGTCCATGGAATGTATTGTAAAGGGACGCAGTATGCCATTGAGTCAATTTTATCGAATTGCGCGAAACACTATGGCGCTGTGGTTTAAAAACACTGAACCCACTGTGAATGAAGTTGAAGCAGAGTTTTGGCGTCATGTGGCCGTTCGTGATAGTCATGTTTGTGTACATTCCGGCTCGATAGACTCCTCGGGTTGGGGTTTCGGTTTTCCAAGTCCTGGGCCTAAAGGAAAGGGATCCAATTACGCGAGACATCCGTGGAATCTTAAAGTGCTAACGAACAACACTGGTTCAGTGTTGCGTTCATTGGGACCTGTAATGGGTGTAACAGTGCCAACGCTACATGTGGGTATGCTTTTTTCTGCATGTTGCTGGTACCGCGACCCTCATGGTCTATCGTGGATTGAATATTTGCACACTGGTGCCTCCAAATTATGGTATGGTATACCAGACGATCAAAGTGCCAATTTCAGGGCTGCTCTGACATCTCTCATTCCTACGCACTGTCAAAATAAAACCATTTGGTTACCCTGTGATACTGTTATGGTACCTCCTCATATGCTTACAGATAGAGGAGTGTCGTTATGTCGTATTGAACAGAAACCTGGAGAATTTATCGTTGTTTTTCCGCGAGCGTACACATCAAGTTTAGCCACTGGCTATGTAGTATCGGAAAGTGTTTACTTCGCAACATCCTCATGGTTAGACCTGGCCAAAGACGATTTTAGAgATATTCACGACAGCTGCGAACCTGCTATGTTCTCTTTAGaacaattattatttgctttagGTTATGATCAACGTGTTACACCTGATACTTTGCAACAGACGTTACCAATGTTACAGGAGGTCTTCGAGAAAGAAACAGCTGCCAGAGAACAACTTAAGGCTGCTGGTGTAACTTCGACTGAAAAAGTATCAAATGAAAAGAGTGGTAAAggcaaaaaacaacaacaacctcCATATAAATCCATTGAAAGTGAATGTGATCTTTGCCGTGCAAATCTTTACATTTCAATGGTGAGAACCGATGAAGGCAACGTCTATTGTCTTCAACATGCTTTGAAAAATCTCAACAATGGCAACATACAAGCCAAACAATGTAAGCTTATTTATGCATACAATATCGAGGATATTGAGAACCTCATTAAGAACCTGAAAGATAAAATACTCCAGAAACGTGCAGTAACTGGtaagaaacaaaaatag
Protein Sequence: MVVSKDSKRKRKESPPPTTPQQQSAAVESSPEMPKRTKVQAQRKFAQGQSAPQSSYSSMIAASSSSNTGPSTSSESREPPTEILPNKRPKTEDFLTFLCFRGSSALPPHLDFLNQGKSKEPERPVKKPTIKPVIKKKGKKGRPPKNTKQKEKNVPAKEVTDVNKDVVAPAEKLINELDEKNDIPEKVQVEVELEEEDDNEDVPTFAVRKRAEIIADGNRRSNRSNADEKCNNTTGTSKRRSNRAIKESRVMLDHLSGDEEDENVSTVDENSKALNLDMDIKDRKTIKTPVNSETPSKESETTGRSRKGRPPSNNKKKDAESSKENEKEGSVKSDIKDKAPVKRPRQKESPIFIPSPEPSGRMTRQRAFFEPVKVPHKDNEDTDDDIKKVITEETVKEPKCKAIGIDDAKKINAEKAEEKFPSKEPIVTDNKNKPAQLDVFDFSSDDEQPLAKTIKLKKTGPNKASPKKTNSRGKKTSPKKESIEETYKINDKIATKAEQTENVKKKPNAADAPMPEIEEETLKTKGKRSLGPVAKNSKKKENDNSLNEADKELTPHSPKKAPNAKQSRKKAKVESNDNTVVHNEAEDNQGSPSRNQRPSRKTKEAAAIYMGIIGHRLQMAEDDDDLSLSSFDRPNVREMEKMENELKRNSASIGKGSPPPKPSISVELPQPTVVAAASTVAIEVKPTTARRGRPPKNPKIPPAPKREIEGMLVKKGAIAKLTQSTENLADAKETKTDPSKTGTEDDEDFLLNEELNETKRKLEKSFSDSDDEPLAIKAHVKGGDKDDEDSPKSTGAVDITPTTLPPVNSLNTIGGGLTSLSMLPLTTKSFTSTTQTQAAPPIPIAPQTAVAPTCVTTPALATCSAVSGPINTIPSPISCSIQPPAPVTPTSQSPFKSIEKKSPVPTSKILNVPATYGIPPASPTGNIAAGINTSFGKSPMYVPQSPAHYHSPHASHIRPTASLPQFHVQSTKNPSLVAPPSNTVTSHLTTPPSQMSAQSPIKYQTPPTTYPPPIEAYPSPKINPNFLTPKFDRNTLSRPGNNTGNNAFPSPSPIKFDMSGSSSGLHKNSSLSAPNVTMSPKTLISSNMNFIGNNLAASTSVTAQLSNDPLKDEIGSILAANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTESYIGDQLSGKERRKAKVNMTHEQIHKWLIECSSNPDEIQDDLDDDFDSDLRPNNFGSTPPPTRDDKESTSFSSSSKATRDLGKSESAWSAKGPSLKATPVVASSGAINNRRDDIKPIEPTSPRIDEEMEKNSPVLNLMFDKALANKQSPVPGSSDEKLTQSDKSEKNNDKKDKEEKVITKTAIIETKKDKVTEKESSSKTNKSSTAGKQNSNQKSLNLKKASTSPSPVTTPTTTATNKQIRKKIVTEVTEEKPSNANQKGTLNPPEVASTNSTSNSINRTPKRTLVYQQKQTPKQQQQQQQQQQQLQKKDSADLKISTTSSHKRSATAYGMAFSVENEKSIYSFDKDDTEDQEKSNKPSTYRRQSRKDSHIDNGINTTPVAPQRTPPTKPKRNAAAVAEIANKELAGGNSQTSSVSLTLSPSEKTKLVKVSLDGDKNTKTTKGGKGGKKNSQVESKPPAKDVGSDSGDGHTFYIPLQGTGTGGDGDGGIQGVAVKLGREGPDGPNQKVIMHATLVTKAQMGSNTKPLPDTMNVSDIVKNLVLSDKKNSGASTSTAAAAATNSCSNSLKNVPIGTVQPRFKGDSAAQGPSTSSAGGVGVGSGALQRVNSNSSLFSGSVKSRNAAAAATASGGGATGHGSNKKFKDDTPIKMANNTAFPRHDDPTQMVEAPIFRPSEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKLLHRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRMTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDVSSENDEEESEEEVDGVSMECIVKGRSMPLSQFYRIARNTMALWFKNTEPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGFGFPSPGPKGKGSNYARHPWNLKVLTNNTGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATSSWLDLAKDDFRDIHDSCEPAMFSLEQLLFALGYDQRVTPDTLQQTLPMLQEVFEKETAAREQLKAAGVTSTEKVSNEKSGKGKKQQQPPYKSIESECDLCRANLYISMVRTDEGNVYCLQHALKNLNNGNIQAKQCKLIYAYNIEDIENLIKNLKDKILQKRAVTGKKQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00741633;
90% Identity: -
80% Identity: -