Basic Information

Gene Symbol
Kdm5
Assembly
GCA_956483585.1
Location
OY101444.1:1870524-1877265[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-25 1.3e-21 78.0 0.1 2 89 201 284 200 284 0.94

Sequence Information

Coding Sequence
ATGTCAACAAAGATATCAGCGACAGCCGATAGTAGCAGCAGTAGTAGTAGTACTACCGCAAGCCCATCAGCAAGTTCGTCTGCAGGAGCAAATGGTAACACAACACCAGCCAGACGTCTTCGTACTAGAACTTCAACTGGTGGCAATGTAAGTGGTAGCGAATCAGCTCAAAAGAAATATGGACCACTTACCGAAAGAAGTGACTCAATTTCCAATGCGACCAGCATGACTGCAGGGAGTGAAGAGAAGCCAAGTGCaagtaaaaaatatcacaacagTTGTCCCCAGCCGCCAACAAGTTCTGGACGTAAAGAGAAGAATCATTTACAACCCCATAGCTCCAGTACTTTTAACATGAATAAAACGGAAGAGTTTAACTTTGATACGCCGCTAGAGTGTCCAGTTTTTCGACCCACTACTGAGGAATTTAAAAATCCTCTAGCCTATATCAGCAAGATACGACCGATCGCTGAAAAATGTGGTATCGCCAAGATTTTGCCACCAGAATCTTGGTCGCCTCCTTTTGCAGTGGATGtcgacaaattaaaatttacaccaCGTGTTCAACGTCTTAATGAGTTGGAGGCCAAAACTCGagtaaaattaaactttcttgATCAAATTGCGAAATTTTGGGAACTGCAAGCATCTTCTCTTAAAATTCCCATGGTTGAGCGCAAGGCTTTGGATCTTTATACATTACATCGCGTTGTGCAGGAGGAGGGCGGTATGGAACAAACGACCAGAGAACGTAAATGGGCAAAAGTGGCAAATCGTATGTCATATCCTTCTAGCAAGAGTGTTGGTGCCACCCTTAAAGCTCACTATGAGCGAATCCTGCATCCTTTTGAAGTGTATACTTCGGGAAAGGTTTTGGGACAGGGTAGTACTGGAGGAACTGTATCAAGTCCAGATGTTAAACTTGAAGATGGTACCGACTATAAGGCGCACGAGATTCCAACACGTCAACAAATCGCTCCACCAAACGAGACTAATGCACGTCGTTCAAAAAGATTTGCAAACTCAAGTGCCAGTTGTGGTTTGGGAATTAATCGTGGCGGTGTAAAGACAGAAACAAAGGAAGACTTCAAGAGAGATTTATTGAGTTGTTTTAATGCATCAGCAGCTTCAGCTGCTAACCGCTCAAATTTGGGAAATGGTATCACCGGCTCTACCCAGAAAAAAGCTCCGGATCCTAATTCGGCTGTGGACCCTCTCATGAAGTACATCTGTCATATTTGTAACCGCGGTGATGTTGAAGAATCGATGTTATTGTGCGATGGTTGCGATGACTCATATCACACCTTCTGCTTGTTGCCACCATTGTCCAGTATACCAAAAGGTGAATGGCTATGTCCACGCTGTGTTGTGGAAGAGGTAAGCAAGCCAACAGAAGCCTTTGGATTTGAACAGGCGGAACGTGAATACACATTGCAACAATTTGGCCAAATGGCAGATCAATTTAAAATGGATTATTTTCGTAAACCAGTTCATTTGGTGCCTACAGATCTGGTGGAACGAGAATTCTGGCGTATTGTATCATCAATTGACGAGGATGTTACTGTGGAATATGGTGCAGATTTACATACCATGGATCATGGTTCCGGTTTTCCGACAAAAAGTTCACTTTATTTGTTGCCTGGTGATCAAGAATATGCCGAGTCGAGCTGGAATTTGAACAATTTGCCTTTGCTGGAAGACTCCATACTAGGACATATAAATGCAGACATCAGTGGCATGAATGCTCCTTGGATGTATGTAGGCATGTGTTTCGCCGCCTTTTGTTGGCATAACGAAGACCACTGGAGCtattctataaattatttacattggGGTGAACCGAAAACATGGTACGGTGTACCTGGCAGTTGTGCTGAACAATTTGAAGAAACCATGAAGCAAGCTGCTCCTGAGCTATTTGCTTCTCAGCCAGATCTGTTACATCAGCTGGTAACTATAATGAATCCAAACATATTAATGAACAATGGAGTGCCGGTTTATCGTACCGACCAAAATGCTGGAGAATTTGTGATAACATTTCCTCGCGCCTATCATGCCGGCTTCAATCAGGGCTACAATTTTGCGGAAGCAGTAAATTTCGCTCCAGCAGATTGGCTGAAGATGGGCCGGGAGTGTATAAATCACTATTCAATGCTACGTCGTTTCTGCGTATTCTCCCACGACGAACTCGTCTGTAAGATGGCTCTTGAGCCCGCAAAGCTAACTTTTGGCATAGCTACAGCTTGCTATATTGATATGGCTGAAATGGTAGATTCCGAAAAGAAGTTACGGAAATCCTTACTTGAATGGGGCGTCACAAAAGCGGAACGTAAAGCATTTGAATTGATACCTGACGATGAACGCCACTGTCAAGAGTGCAATACAACGTGTTTCCTCTCTGCCGTATCTTGTGAGTGCACAAAGACAATTGTTTGCTTACGACATTACACTGTTTTATGCACATGTCCTCCCGATAAACACACCCTTTTATACCGTTATACACTTGATGAGATGCCcttaatgttacaaaaacttaaatctaaAGCCCAAAGTTTTGAGCGCTGGTTATCACGTTGCCGGGACATCGTTGATGCTAATACACCAACATCTGTGACCTTGCAGGAGCTTCAAGAGCTTTGCAAAGAGGCCGAAGTAAAAAAGTTTCCATCGTCTCTGCTAATCGATCGCCTTAATGCTGCAGTTTTGGAAGCAGAAAAATGTGTAACCGTAATTCAACAACTGGGAATCAATAAGgTTCGCACTCGCTCCGATAATAATTTAGAAGCTGCTCAGTACAAACTTACAATGGAGGAACTTGAACTTTTTGTTCAAGAAATTGATAATCTTTGTTGTACCATCGAGGAGGGAGTGTCAGTGCGTGAGCTGTTGGTTTTGGGTAAACAATTTGTAGAACGCACCAATGATATGATGAAAAATTCCTTAGATGCCCTTGAGGAAACAGAATTGGATGCCATCATCGACGAAGGCAACTCATTGCGCATTGAACTTCCCCAAATGCAACAGTTGAACATGCGactgaaacaattaaaatggTACAAACGATCACAAGGTTTAAGAGCTGCAAGTGCGAAACTTACGTATGATGATGTTAAAAAGTTATTGCATGTGGCAGCAGCTGAAATAGTACCGTCTGATCTGATTATAGATGCGGAAATAAGAAAACTACAAGAAATCGGAGCTTCTATAGAAGCCTGGGAATGccaagcaaataaatatttcaactgCAGCACGCAACGTCATGAGCTGATGGAAATCGAACAGTTCCTTAAAACAGCTGCCGAGATCGAGGGACAAGTACCTTCTTATGGTATGCTGAAGGATGCTTTACGAAAGGCTAAAGAATGGCTCCGGTCGGTTGAACAACTTCAAGCTAATGACCACTTTCCATATTGTCATACATTGGAAGCAATTGTTTCGCGTGGCTCTAATATTCCAATAAAACTGGAGGAACTTTTACGAATGCAAGGCCATCTTAAAAGTGCCCATGATTGGAAAGAGAACACCGAGCGGgcatttttaaagaagaataCTTTCTATACTCTATTAGAGGTTCTGATGCCTCGAGGTGAGTCAGTTATTATAGACTCGGATCTTAAGAAACCATTCGAGGACGATTTCGTTAAAGAAATGAACCCAGCTCAAATAGTGGAATCCTTTAAAGTAGCCGAAGAAAAAGAACTGCGTGATATGCGAGAGCTGAGAAGACAAAACATGACCAAAAATCCGCTGCGGGATGATTACTGTCTCTGCAAGTCATCTTTCCAAGGCGTGATGTACAACTGTCAATTATGCAGGGATTGGTTTCACGAGGAATGTGTACCGCAATCACCACAAATGCAAAGAAACTGTGCGACGGACGCTAATATGAAATTGAAGTGGTTGTGTCCCTCTTGTGTTCGTTCCAAGAGACCACGCCTTGAAACAATCTTACCATTGCTTGTTTCCCTTCAAACCCTCCCAATACGCTTGCCCGAAGATGAAGCTCTTCGTTGTCTTGCTGAAAGGGCAATGAATTGGCAGGATCGAGCCCGAAAAGCCCTTACAAGCCCTGACGTCACAGCTGCGCTCGAAGTTATAGCCACAGCGGCCCAACAAAGAAATAAGCAGAAGAAACGCAAAGGAACAAATAACATTGGATCAGCTCGCAAGCCAAGGCGCAGTAGTCAACGAAACTCTAAAGACGACGGCTCAGATAATGCCGACTCAGATGATGAGGGTCGCTTACACATTGTCGAGGAAAACTTTAGTAACGATGAAGATGAAGACTGCGAAGTGAATGCATCGAATGAGAACGCAACTACCCACAATGGCCTCCAGCTGCATAAATTGTTATCGGACAGCGAGACAGACAATCTCGAGGAACTGATGATGGAAGGCGACCTGCTTGAAGTATCTCTCGATGAATCAAAAGAGCTCTGGCGGGTTCTTTCAACAGTGCAACCTGTACAGCCTTCAGAAGCCGCTGCTCTAGTCGAGCAGCACCAATCTAcgataaaacaacaaaaccagCAGCACCAACAACCGACATCCAGCGTTAATTCAGCTGCCGAAGATTCAAACGACAGCTTGTTGGTACAGAGTAGTCCCAACAGCACCAGCAACAGCGGCAGCGGTAACGGTCGCAGTTCATCCAATGTGGTTAAAAAACGTAGATCCCTCGACCCAACAACAGGATGTCCCGTGCCACGTAAGAAAAATGCTACACCGAACAAACAAAACGCTTCCACTGTCTCAAATACGTTATCAGGGAAAAAGTCTGCTAGAAAATCAGATGCGAATAACAAAATAACCGGCACTGCAGATGACAATGCAGAGAATTATACACCAACTAAACAACCAAATGGTGGTTCTCAAAATCAATCTAACAATAGCAACAGCACTGCATCAGGATCACAGAAAAAGCATAGAAAACGTGTTGGTGGGAACAGTAACAACAGCAATATAAACGTTTCGGCTAGTCAAAAAAAGAACTCCCAAAGAGCTCAAATGGCCCAGCAAGAGGATGACGAAGAAGAATGTCGTGCAGAAAACTGCCACAAGCCGACGGGACGTGAGGTTGACTGGGTACAATGTGACGGCGGGTGCAACGAGTGGTTTCACATGTACTGTGTTGGTCTCAATCGCAGCCAAATTAAGGCCGATGATGACTACATTTGCATCCGTTGTTCAAAGAACGTAACAGTAACCACAACAACAGGTGGCAGCAGTGGCGGAACTTCAGCTGTACCGACGCAACAAAAAGGCCGCTCCCAAACGGCACGATAA
Protein Sequence
MSTKISATADSSSSSSSTTASPSASSSAGANGNTTPARRLRTRTSTGGNVSGSESAQKKYGPLTERSDSISNATSMTAGSEEKPSASKKYHNSCPQPPTSSGRKEKNHLQPHSSSTFNMNKTEEFNFDTPLECPVFRPTTEEFKNPLAYISKIRPIAEKCGIAKILPPESWSPPFAVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQASSLKIPMVERKALDLYTLHRVVQEEGGMEQTTRERKWAKVANRMSYPSSKSVGATLKAHYERILHPFEVYTSGKVLGQGSTGGTVSSPDVKLEDGTDYKAHEIPTRQQIAPPNETNARRSKRFANSSASCGLGINRGGVKTETKEDFKRDLLSCFNASAASAANRSNLGNGITGSTQKKAPDPNSAVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPTEAFGFEQAEREYTLQQFGQMADQFKMDYFRKPVHLVPTDLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFASQPDLLHQLVTIMNPNILMNNGVPVYRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECINHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDSEKKLRKSLLEWGVTKAERKAFELIPDDERHCQECNTTCFLSAVSCECTKTIVCLRHYTVLCTCPPDKHTLLYRYTLDEMPLMLQKLKSKAQSFERWLSRCRDIVDANTPTSVTLQELQELCKEAEVKKFPSSLLIDRLNAAVLEAEKCVTVIQQLGINKVRTRSDNNLEAAQYKLTMEELELFVQEIDNLCCTIEEGVSVRELLVLGKQFVERTNDMMKNSLDALEETELDAIIDEGNSLRIELPQMQQLNMRLKQLKWYKRSQGLRAASAKLTYDDVKKLLHVAAAEIVPSDLIIDAEIRKLQEIGASIEAWECQANKYFNCSTQRHELMEIEQFLKTAAEIEGQVPSYGMLKDALRKAKEWLRSVEQLQANDHFPYCHTLEAIVSRGSNIPIKLEELLRMQGHLKSAHDWKENTERAFLKKNTFYTLLEVLMPRGESVIIDSDLKKPFEDDFVKEMNPAQIVESFKVAEEKELRDMRELRRQNMTKNPLRDDYCLCKSSFQGVMYNCQLCRDWFHEECVPQSPQMQRNCATDANMKLKWLCPSCVRSKRPRLETILPLLVSLQTLPIRLPEDEALRCLAERAMNWQDRARKALTSPDVTAALEVIATAAQQRNKQKKRKGTNNIGSARKPRRSSQRNSKDDGSDNADSDDEGRLHIVEENFSNDEDEDCEVNASNENATTHNGLQLHKLLSDSETDNLEELMMEGDLLEVSLDESKELWRVLSTVQPVQPSEAAALVEQHQSTIKQQNQQHQQPTSSVNSAAEDSNDSLLVQSSPNSTSNSGSGNGRSSSNVVKKRRSLDPTTGCPVPRKKNATPNKQNASTVSNTLSGKKSARKSDANNKITGTADDNAENYTPTKQPNGGSQNQSNNSNSTASGSQKKHRKRVGGNSNNSNINVSASQKKNSQRAQMAQQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKNVTVTTTTGGSSGGTSAVPTQQKGRSQTAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01235504;
90% Identity
iTF_00899304;
80% Identity
-