Gvir030321.1
Basic Information
- Insect
- Gymnocheta viridis
- Gene Symbol
- Ubp1
- Assembly
- GCA_956483585.1
- Location
- OY101443.1:78766563-78814031[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.013 2.6e+02 1.9 1.5 88 161 12 84 2 119 0.64 2 3 3.1e-53 6.5e-49 167.4 0.1 18 183 384 546 370 559 0.92 3 3 2.2e-14 4.5e-10 40.4 0.1 185 222 584 621 570 622 0.90
Sequence Information
- Coding Sequence
- ATGGCTCTGTCGCTGGTCGCTACCCTTCCacatcatcatcaacaacaacaacaacagcaacaacaacaacaaaatcaccATCAATCTAGTTATTCCGATTTACAATCTTTATTAGATCCTTATACTTTGGAATATCAAACAGAAGGACAAACATATCCAAATTTTTTGAATCAATCAGCCAACCAACAGAActatcagcagcagcagcaccagcggccaacaaaaatttgtttaacgaaTTTCCACAATACAGATTTAATGGAGTTTAGCAGTAATAATAACAACGGCCACAATTCAAATAACATacagacaacaacaacaacattgcaGCATAATAATCTGATTACAACAAATATTTCACAACTTTCTAATTCATCAAATCGCAATTTAATAAGTGGTTTTCATCATCAGCATTTTGGACCAGAATATGAACCAGTAATAACTTTCGTTGACTCTCCACCGAATTCTGAAGAGTCTTGGCAGGACGATCAATCGAAAGGATCGCCAGGTCCACAAATAATCGACGTTCAAACAATATACCTCAATAGCGGTTCGCGTAAAAGACGAATGGAGTGGGATCCATTGGATATAGGTCAGAGTGAAAACACTGCCTCTACACAAACTGGCGAGTTACCAGCAAAATTGTCAACCAATCAATTAGCTGAGAaggacaaatataaaaaagaaagattaaataatgGTCGTGGTACATGGGGTGACGATATTGGATTTGATTTAAATACTGAGTTTAGCAGTAACTCCTATTTAAATAAtgaatCTTTTATGAGCTTTGCATCTGGCTTACCCGCTTCCCTTAAGCAAGAACCTCAGACGgatcaattgaaaattaataaaagctcATTGAACATACATCAAGACTCGGGTAATTTAAGTATTTCGACCAAAAATGATAAGCCACCGGCGGGAGCACCAGCAGCAACAGGCGGTCACATTGAAACGTCATcggaaaaacttaacaaaacagATTTAATCGACAGCAATTGCATTTTAGATCAAAATTCATCAAATGCGAATAAAGGAAACGGTCTAAATAATGATCAGGCAACCACCACGTCTGTGCCACATCAACTTTTGACCGTAGTTGATGCaagtaaaattgaacaaatacCAGCAGGACGTGATACAACTGCAACATCAACAACTTCTAATTCGGATGATTATAAATTCCAATATATATTAGCCGCAGCCACATCAATTGCAACTAAAAATAATGAAGATACACTCACCTATTTGAATCAGGGACAAAgttatgaaataaaactaaagaaaatcgGTGACTTATCACTATATAGAGATAAAATCTTAAAGAGCGTAATTAAAATATGCTTCCACGAGCGCCGTCTACAATATATGGAACGTGAACAAATGCAACAATGGCAAGCCTCACGTCCTGGTGAACGTATAATAGAAGTTGATTTGCCTTTATCATATGGCCTGTGTCACGTTTCGCAGCCGCTAAATCCGAACTATTTAAATACCGTAGAATTGCTATGGGATCCCATGAAAGAGGTGGGAGTTTATGTTAAAGTCAATTGTATATCGACGGAGTTCACTCCAAAAAAACATGGTGGTGAAAAAGGTGTACCATTTAGACTGCAAATTGAAACGTACATTGAGAGTTCGAACGGTGCCAGCGGTAACAATAATACCGTATCAACTGGAACCAAATCACCTTTAGCAGCTTCACCTACACAGTTGACACCCAACAATTCAATGGTTGGTCTGGCAGCAGTGGCTAAGCAACCCATACATGCAGCAGCTTGTCAAATCAAGgttttcaaattgaaaggtgCTGATCGCAAACACAAGCAAGACAGAGAAAAAATCCAAAAACGTCCACAATCGGAACAAGATAAATTTCAACCCAGCTACGAGTGTACAATTATGACAGATATACCACTGGATGTAATAGCAACAACTAATAATCAGAATTCGAATGGTTGCTTTAGTCCCGAATATATGAAAATCTGGCCAAATTCTCCTGTACATATGCCAAAATATGATGGTATTTTACCATTTACCGGTGCCTCACCAAATGCCAATGCTAGTCCAATAGCTATAAATAGTGTCTCCTCAACAAATTCACCAAGTCTTAAAATAATGGATCcaaataatatggttaaccCACCATCGATGGCCAATGATATGGATGAATATaattCGAATACCATAATGCCCGACTCCACACCGGCACAAGTAAATCAATGGTTGACATTTCATCGTTTAACATCGTATTTATCAACTTTTGCCCATTTTTCTGGAGCCGATATTATGagAATGTCAAAAGaagatttaatacaaatttgtggCCTTGCCGATGGCATACgcatgtttaatattttaagatcCAAAGCCATAACGCCACGTTTAACCCTCTACGTTAGTTTAGATGGCAATAATTATAATGCCATATATCTTATTTCTAATACATCCAAAGAACTAttgcaaaaactatttaaacttCCCGGTTTTTATGAAATAGTTGCCAAAAGTTCCACACAAAATGGCAGCGCCTCTGCAGCTGGCAGCGGTAATAACTCCATGATAGATAATTCCTCACCGTTTCATAGCTGGAGCATGCATTCCAAATATTCGGGCAGTGGTTCGAATATTTTCAGTGAAGTCAAtagtaaaagtttaatttatgttACCGGTCCAGCTGGCATACATGTTGCCGTTACCGACGAGGTATTAAACAATGAAATGCGTGATGGCACTTTATATGGCCTAGAAGTACAAAGTGGAAAAGTTATTATGaaattaatcaataaaaatgaGAATTAG
- Protein Sequence
- MALSLVATLPHHHQQQQQQQQQQQNHHQSSYSDLQSLLDPYTLEYQTEGQTYPNFLNQSANQQNYQQQQHQRPTKICLTNFHNTDLMEFSSNNNNGHNSNNIQTTTTTLQHNNLITTNISQLSNSSNRNLISGFHHQHFGPEYEPVITFVDSPPNSEESWQDDQSKGSPGPQIIDVQTIYLNSGSRKRRMEWDPLDIGQSENTASTQTGELPAKLSTNQLAEKDKYKKERLNNGRGTWGDDIGFDLNTEFSSNSYLNNESFMSFASGLPASLKQEPQTDQLKINKSSLNIHQDSGNLSISTKNDKPPAGAPAATGGHIETSSEKLNKTDLIDSNCILDQNSSNANKGNGLNNDQATTTSVPHQLLTVVDASKIEQIPAGRDTTATSTTSNSDDYKFQYILAAATSIATKNNEDTLTYLNQGQSYEIKLKKIGDLSLYRDKILKSVIKICFHERRLQYMEREQMQQWQASRPGERIIEVDLPLSYGLCHVSQPLNPNYLNTVELLWDPMKEVGVYVKVNCISTEFTPKKHGGEKGVPFRLQIETYIESSNGASGNNNTVSTGTKSPLAASPTQLTPNNSMVGLAAVAKQPIHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMTDIPLDVIATTNNQNSNGCFSPEYMKIWPNSPVHMPKYDGILPFTGASPNANASPIAINSVSSTNSPSLKIMDPNNMVNPPSMANDMDEYNSNTIMPDSTPAQVNQWLTFHRLTSYLSTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRSKAITPRLTLYVSLDGNNYNAIYLISNTSKELLQKLFKLPGFYEIVAKSSTQNGSASAAGSGNNSMIDNSSPFHSWSMHSKYSGSGSNIFSEVNSKSLIYVTGPAGIHVAVTDEVLNNEMRDGTLYGLEVQSGKVIMKLINKNEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01137739;
- 90% Identity
- iTF_00900303;
- 80% Identity
- -