Gvir016813.1
Basic Information
- Insect
- Gymnocheta viridis
- Gene Symbol
- Tef
- Assembly
- GCA_956483585.1
- Location
- OY101441.1:127159331-127160044[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9 2.4e+04 -3.4 0.1 49 59 51 61 48 65 0.48 2 2 1e-14 2.5e-11 44.6 6.1 1 61 170 230 170 233 0.97
Sequence Information
- Coding Sequence
- atgtatgtttcAGATTTAGCATCATGCCACAATGCGATAAATAATGCACAACTTCAACCACAACTAGATACAATGCTGCCGCACAGCTGTGAATTGGAGCGAACACCTCCAACATCACCCATTTTGGATGTAATGGACAGCTCGACATTGGAACAATTACCAAAGGAGTTAGAAAATACATCAAGTTCACTATTACCAACAGAAATCGTTTTAAATAAAtcgcaaaatttgtttaagtcaGTTGCAATTGATTCCTCAAAGTTGACTTCAAACAATCATACATTTCCTTTATCCAATATGAATGTGTTACCTTTATCAGGAGCATCAACAGCAGCACTTTTAAGTCAACAGGCCGGGTTACCGGCCTTTGAATATTTGACGCCAGGAGCTAGAAATGTAAGTCCAGTAGACTTTCCATTGATGGAGCTCAATCGTGTCGGTGGCTTATTTCCATCATTTCTTCATCGCAGACCTAGAGGAGAAAAAAGACCAATCCCAGAAGAGCAAAAAGACGATAAATATTATGAGCGTAGAAAGCGTAATAACGAGGCAGCTAAAAAATCGCGAGATGCTCGTAAAATAAGAGAGGATCGAATTGcattcagagcagcatttctgGAACAAGAGAATTCTTTATTAAGGGCACAAGTAATGGCACTCAGAGATGAATTACAAACAATGAGACAGATAATTGGAAgaagtaatttaaattaa
- Protein Sequence
- MYVSDLASCHNAINNAQLQPQLDTMLPHSCELERTPPTSPILDVMDSSTLEQLPKELENTSSSLLPTEIVLNKSQNLFKSVAIDSSKLTSNNHTFPLSNMNVLPLSGASTAALLSQQAGLPAFEYLTPGARNVSPVDFPLMELNRVGGLFPSFLHRRPRGEKRPIPEEQKDDKYYERRKRNNEAAKKSRDARKIREDRIAFRAAFLEQENSLLRAQVMALRDELQTMRQIIGRSNLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00899275;
- 90% Identity
- -
- 80% Identity
- -