GBI_14792-RB
Basic Information
- Insect
- Gryllus bimaculatus
- Gene Symbol
- -
- Assembly
- GCA_017312745.1
- Location
- Scaffold151:597859-628870[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.012 0.71 11.1 0.4 6 22 200 216 197 216 0.95 2 14 4 2.4e+02 3.2 0.4 6 23 1079 1096 1077 1096 0.94 3 14 0.019 1.1 10.5 0.2 2 23 1130 1151 1129 1151 0.97 4 14 0.00087 0.051 14.7 0.2 1 23 1184 1206 1184 1206 0.98 5 14 0.0083 0.49 11.6 6.1 1 21 1242 1262 1242 1264 0.96 6 14 0.18 11 7.4 0.4 5 23 1440 1458 1438 1458 0.93 7 14 0.033 1.9 9.7 3.1 1 23 1464 1486 1464 1486 0.97 8 14 0.02 1.2 10.4 5.2 1 21 1492 1512 1492 1513 0.96 9 14 0.043 2.5 9.4 1.7 2 23 1598 1619 1597 1619 0.94 10 14 0.0025 0.15 13.2 2.9 1 23 1705 1727 1705 1727 0.98 11 14 0.011 0.65 11.2 4.7 1 20 1733 1752 1733 1755 0.95 12 14 0.12 7.1 7.9 0.0 1 20 2319 2338 2319 2340 0.93 13 14 0.0048 0.29 12.3 1.8 1 23 2430 2452 2430 2452 0.95 14 14 0.002 0.12 13.5 1.2 1 21 2458 2478 2458 2479 0.94
Sequence Information
- Coding Sequence
- ATGGCTAACATGATAAACACAGACGAAAACTTCTGTTTATACATGGACGACATTGTGAAAACAGAGGAAACTGTTAAGGATGAACCAATGGGACAAATGGAAGATGATTTTGAGAATGCAATATGGAATTGTCTGGAAAACACTAATGGCTGCTCTGAAGATGACATTCTAAAAGCTGTGTGTCGCTCCCCTCTGATGGTGATGCTGCCTGCATTTGTCGAGGGGGAAGGTGGCCCTCCAGAGTCGCTGTCTGCCTTGGAGGAGCAGGACTTGTTTGCAGTGGTGGAAGGTGAGTGCGCGGGAGCATCAACAGTTCCACCACTGATTAAGAAAGAAGTGCCTGCGGAGGTGCGTCAGCCAGTTCATGAACAGACCCACAGATTTGATCCTGATGACCGAGGCTCTCCGAAGGTGTTTATGGAAGTGGGGCGTATTGAACCACCTAGCACCACCACTGTGGTGCAGATGCCAGTGCCGGCCCCCGCTGCAGAAGGAGGGGGAGGAGGGGAAGGAAACAATATTGACCGCGTCAGTGAACCACCAGTACTGCACGTTGCCCTAAGAACTTCAGGGGCGGACAAGGCGTTCCAATGTTCGTGTGGAAAAGTGTATCGGCACAGCGGGAGCCTGTCGAAGCACATCCGTGTGCTTCGCAACCGACTGAGCACGCAGCCAAACCAATCTGGTTGCGGAAATGTTGGCAAGGTCAACACTGCGGTGAATGAGAAGGCCAGAGAGAACAATGCAACAAACGCAAATGTTAATTGTAACACAACTGACATGCAACCCAGGGAATTGAGTGTGTCTGCTTCGCAGAAGGAAGACAGCAGTGGACAGAATTTTGTACTCAACACTGGTTGTTTTCAAGGGGGTAACAACAACATCATCAACAACAATGGAAATACAAGTCCAAGTATGCAGAGTAATGTGACTGTTGGCCACTGCAATTCACTTGCACCTTTTCCACTTCCGAGCCAAGTTCAAGTCAATAGAACAGCAAATACGAATGTGCAATGTAACATAATGGACATGCAACAAAGCCAATTGGAAGTTGCTATTCCACAGGTGAAAAAAGAAAATGACTGTGGACAGAATTATGCATTGAATTCCATTGGTTTCCAAGGAAATAACAAAATTGCAGAGAACAGAAACGCAAACGTACAAAGTAACAAGGCTGTTGGCCTTTGCAACTCGCTCTCTGCTATTCCACCTTCAAGCCAAGTTCAAACACTTAGAACGACAAACATGACTGTACAGAGTAACATGACTGAAATGCAACATGGCCAATTGAAAGCAGCTATTTCACCGCTAAGCAATGCCAGCAGTGGACAGAATTTTGCACTCGGAGCTAGAGGTTTCCAAGAGAGTATTAACTCTATAAACAATGGAAACCTGAGCCCAAATGTACAGAATATTAAGACTATGGACCATGGTAGGTTTTTTGAAGCTGTTCAACCTACAAGTAATTTTAGCTCTATACTCTCTTCCGTTCCCCTTAGTAATAGCCCTGAACAAAATGGAATGAGAAATGTGGAGAGTAATATGAACGCCAGCCAGTACAACTCTCTCACAACTACTCAGTATGCGATCCAAGCCAACCCTGGCCCAGTCACACAAACTAGTGCTGCAGGCAGCAACAGTGCTGAACAAAATGAATTGAGGAACACGAATCATAATGGAATTGACAGGCAGTACAGCTCACTTGCAGCTAATCCACATGTGAGTCATTACAGCAGTGGACACATGAGTACACCAATCCCTGCTGTGCGAGTCACTAACAACACCGGACAAAATGGATTGAGAAACGCAAGTACAATTGGAGGTAACTCGACTGACAGACACTACACCTCGCTTGCAACTGTTCCACATGTGAGCCAAGTCAGCAATGGACATGGTGCTCTGACCGCAGTACAAGATAATGTCGGACAGAATGTAGGGAGAAACCCAAATGTAGATTGTAACCTAATTGTTGGCCAGTACTACTCAGTTGCAGCTGTTCCACAAGTGAACCAAATCTCGCCCAATAGATTCAATGTGTCGGATAATATCAGCAGTGGTCAGAATAGAATGAGTGACTCCAGTGTAGAAAATAACATGCCTGCCAACCAATACTCTGTCATACCTACTCCAACTCCAACGGTAAACCAAACTGTTAGTGGAGGATATTCAAGTGCTCCGGCCAATGCTGTGCTAATTAACTACAGTACCGGACAGAACGGGATTGGAAATGCGTACGTAGAAAGTAACTTGGCTGACAGACTCTACAGTCCACATGTAGGTAGTCTTCCTGTCAGTCAAGCCAGCAGTGGTCATGTCAACACGCTCATCTCTGGTGGACAAAGAAGCAGCAGTACTGCCCATAATGGGATGAGAAACACAAATTCAGAGAGAAATATGACCGATAGACAATATACCATGCTTGAAACTGTTCCACATGCGAGTCAAGCCAGTAGCGGGCTTATCAATGCCTTGGCCACTGCTGTGCGAGATTCTAATAGCTGTGTTCAGAACGGAACGAGGCTCTCAAACATGGAGAGTAACATGAGTGGCAGACACTATACTACACTCTTAACTGTTCCACCTATGAACCAAGCCAGCACTGAGCATGTTAGTACAGTCGTCAATTCTGTACAAGGTTCAATCAGCTCTGGACAAGACGGTACGAGGAACTCGAATATAGGAAGTAACGCAACTCATAAACATTACACCATGTTGGAAAGCGTTCCACATATGAGTCAAGACAACAGTGGGTACGTCAGTGCTCTGACCACACATGTGCAGAATAGCAGCACCACCAACCAGAACAGAATAAGAATCACTAGCGTGGAAAGTAACATGACAGTCAACCAGTATAACTCGCAGACAGGAACTCCTCTTGTGAGCCAAATCAACAAAGCACTGGCAAGTGTTATGCAAAATAGCAACAGGGCTGGAAATGAAATGAAAAATGTTTCTGCAGAAGTCAGCGTAAATAATTGGCAACAACAGGCAAATACAGTAGTTACAGGTAAATGTGACAACCCCATTGACAGAGCAGGGGCACGTGCAGGTCCCTTACGGCCATCCACAAAGATTGCAGCTAATAATCAGGTAGTTAAAAATGCTGGTTGCAATTTTAAGCTCTCTTCCAACAAAGTTCCTTCTTCATTAGAGGCCTGTTCAAAGGACACTGACCCCTATCGCTCAAAGTTCTCCAAGTTACCAGCATCAGAAGGTAGTGGGTACAATTGCTTTTGTGGTGTATCCTTCCAGAACTTAACAACCCTCCTTACACATGTAGAAAACCATTCTAAAGAAGAATTTGAACTGTATTCAACACAGGCTATACTACACATCAAGGACCCAGCTCCCAAAGATAATACAAATTTCTGCTCTGATTTATCCAACAAGTGTAATACTTGTGGAATTTGGTTTGAGGATAATGTTCAGCTGAATTTGCACATGGAAAGTCATGTAAAGGTAGATTGCAACGAACAGACAATATTGAACATCGAGGAAGACAATTTTATTAGCAGTTCCAACAATGATAGAGACAACAATGAGAGAACTTACCAATGTGCCATTTGTGATAAGATTTACAAGGAATTCACAGATCTAATGATGCATATGGAGATCCATCAAAAGAGCGTCACTGATGAACAGGAGACTGGGATCTGTAAGGGATGGAATGATGCAAGAAACAGATGTGTGAGGGAGACGCCTGAACCTCAAGAGATGTTGAACTACCAGTGTGGGCTCTGCAAAAAGCGTTTCAAAAAATTGCGCTACCTCACATCACACATGCGCTGTCACACAAAGACAACCTGCCCAGGAAAAACAAAGAAGTTCCAAGAGCCCTTAGTACATGGAAGGATCAATTCATCAGCCTGTGATGTTTCAATTTCTAACGATCCTGCAAAAAGAATGAAGATAACTCAAGTTCCATTAACTCAGCAAAAGAAATCTGTTAACAATATTACTTCAAGCAGTGGTAACAGTATACCTTTAACAAGTCTTGATCATCTCCAACAGAATAACATGCATTTGGTAAATTCAAAAAATACCATCAATACAAAAAGACCGTTCATCAGTACAAAGCCAAACCACCAATATAAAAAAACAGTCCTTACCATGGAGCGTGGTACTTCTACACATCCAGATACTTGTTCCACAACTGGTGGTCCAATGTCAATTAGGGTACAAGCTGCTCTTACTGACATAAGTCAAGAAGCGAATAGAAGAACCAACGAAAACCATGAAGACATTGGGAGTCCTCCGACTGCCACAAGTGTCACCAAGGCCGCTACACTCTCTGGAGAAAGCAAAACTTTTTCCTGTATATGCGGAATGGTGTTTAGAACATCATGTGCGCTTGCTGCACACACCACCGATCACATAGGAAGGCGAGAGTACTTTTGTGATATTTGCGGCAAGTTGTTTAGACAGAAGTGCATCCTGTTGTCGCACTTACGTTATCACAGTTATCAAAAGGCATACAAATGTTGCAAGTGCAGCAGATCCTTTGAACGTCACAGTGATTTCATGGCCCACAAGCGTCTCTACAGGGTAAATGCCAGTTGCTATGTTTGTCGGAAGAAGGTAACGCGGGCAGTGTGTGGGGCAAACCACACGCTCCCATTTCAGAACAAAACGTTTTTGTGCGTTGATTGCAATGGCTCAACCGTGCCCGATAATCCAGATGAGACCAGGGATAAATTGGGTAGGTTTACGCGCAAACACGGCAGTTCATCAGGTGGTGTTGGTGGAGAAATCGGTGATAAAGGTGAATCAGAGGCAACAAAAAGTGTGTTGTCGTGCACCATTTGCAAGAGTGTATTTACAGACAGCAAGAGTTTGCTCATTCATTCACATTCTCATTTAGGTGAATGTGCTGTGCTCCTGGAACGCTTGAACACCGCAGAGATTTATAAACGAAGCTACAATTGTGGGAGGAATGAAGGAACAGTCAAAGTAGCTTCCTCCCATCCCCCCAAGGCATCTGCAGCAGGCATCCAAATATCCAACAGGCTCTCCAAAGCAGTTGGGAAAAAAAGGTTCACATGGAAATGTCGCTGTGGAGGAGTTTTCAAATGGCGCAGCTCTATGAAGAAACATCTGTGCAAGTACACAGGTCATCAGTGTGTTGTTTGCCGGAGACTTTTCAGACGGTTTGCATCCCTCAGGGACCACATGAGATCACATACTGGGAGGAGGAAGTATAAGTGTACCACTTGCACCGAGTCGTTCTCACGGTTACGTGACCTGGAAGTGCATCAGCATTGCCATGCTGAGAAAGCGCCAATGGGGAATGTGGAAGCGTGCAAAGCAAATTCTCAGATTGAGCCTGATGAAGCAGAGAAAGGTTCTGAAGAACTTGGTGAGCCACAAGAAAATCATGGTTCAAGTGAGGTTAATAGTCTTGAAAAGGAAAATCCAGGTAATACCAATTTGCTTCAACCACCAGGTCCAAATCCCATTAGTTTACTTGGAAATGAAGGCCCAAATTGTACCACTTTTCCTGAAAATTGCATACAGAACGGTGCGATTCATGGCCTTGTAGAACAATCAACTCTGCCTGCTTGTTCACCATCAGATGTAGGTAGGGATCGTGCATTGGATTGTGAAACAAAAGAGGATTGTGGTGCAAAGAGATTAGAGATTCAATCACACAAAGAATGTAATTTAGAGAAAACAATCAGTGGTAATGTGAATCCACAGCTGTGCTGCAGACAACAACTAACATCCTCTGAAGGTGCAAGTCCTGGAGAAGACAAATTAAAAGGAGTTAAACCAGAGCCATCTTTCTTACTAGAGTTTGACAAACAACTAAATGAATTGCAACTTGCCCTAAGTACTGAGGATTCTAATTCTAAGACTGGCAGCATTGAAGGTACTCGAGAAGTGCTGGGTTGTGGTATTACACCTGCTAGATGCCATTCTGCCCCTGTTGAATATTTGAACCTGCAGGTGAAGCAGGAACACTCTATGGACTCAAACAAAAATTTCCAATTGAATCCACACAAGAAAGAAAGTCAATTTGGCAGTGAACAGTCGAATGATGGTCAGAGCACAACCTTGCAAGTGGGCCTTGATTCTGAGGGAGAATGTGTTGAGAGTAAATTTGACCCGAAAACAATGAGTAGCGACTTAAAATCCAATGGAAGTGATCGCATCAAGAAGGAATTGACACTTGCCCAGCCTTCGGAGAAATCTTTTTCAACTGTAGAAAGTGGTGGGGGGTCAGCATCTCGCCCGGAAGTCGATCGTATGGCTGTGAATTGTGGTGTTAATTCACTCCAAAATTATTGTAGCCAGGAAACAGTAAAACAGGATGCTGAGCAAACAAATAAGGATAAAGATTTGCTTTCGATTAATGATAGGGTTGTCAAAAAAGAAAACCTTTTTCAAGTCTGCAAACGTGAACCAGATGCACAGCCTCCCGGAGAAAGTGAAAAAGAAGACGACAAGACTTTGGGTGCTCTTGAGTTGCAGCAAATTTGTCCTTCAAAGAAGACAGCCCTTGTCGACCTTGTATCGGATGATGAGGACCAGCACACGACTTCAGGGTCCCATTTACATCCATGTAAAAAGCATTGCTCTGAGAAATTGAGGTCTGACCTTTGTGAACATACAAGCAAAATGCCAAGTTCCTCTCCAAAAGTGTATCAAATTTGTGATTCAGATGTTGAGGAAGAATCGGTGAGCCATCCATGTCCACAGTCAAAGAGCGAGTCTGATGATGTAATGTTAGTGGAAGAAACAAGCAAAAAAAAGAAGCCGCCTCCAGAAGTGTATGAAATTTCTGATTCGGACGAGGAGGAAGGAAAAGAAGGTAATCATCGCTGTTCAAAGGCACAGAGTCCTTACGTTGATCAAGAGATCACACGCTCGCACTCGAACAAAACTTTGTTTGAAGCAGGTCAGAATTTGGTGCATGATGATCACAAACCATCCTTAGACGCAGAAACAAGCTCTTTTGCTTGCGACGTCTGCATGAAACCCTTTCCAGACTCTGATGCACTGCAAGTTCACAAACACATATGGGGGAAAGTGCCTTGTAACATTAACAAGTGGCGAACCACTACACAGAACAAACCGAAAAGTGAGAAGGGAGCAGAGACAATTGGAAGTGCTGGGAGAGTAAAGCGTGAGAGTATGATGGGAGAAGAATCAAGACCTAGCTCTGCCCCAGAGAGCACGCAGACTTCCGGTGAGAATTTGCGTGAGTGCCCCTGCTCAGAGAAGACACAGTGTTGTTGTAAAAGCAAATGCCAGCGCCAGGAGCACCGAGACAAAGCGACAGGAGTGCATGTGTGCAGGGCTTGTGGGAAGTCGTTTGCGCAAAAGGATTTTCTCATCGACCACTTGCACGAGCATATCGATGGAAGGAAGTACCGATGCAAGTATTGCAGCAAGACGTTCCAACGATCCGTGAAGTTGGCTGTGCACAAACTGCGATGCAGCCAGAGGAAGATGAGCGCGAAAAAGGTTAAACCTGCCAGCGACGATGATGATGTTGAGACAAACAAAGGAACATCATTTCCTAGATCATTTGCTGTGCCGTTTGTTGGCGTTCAGCCTCAAACTGTGCCTATGTTAGTTTCTGTCCCCGTGCTGGTGAGCAGTGCAATGACTTGGGGCAATATTGTTACTCTGAGATGA
- Protein Sequence
- MANMINTDENFCLYMDDIVKTEETVKDEPMGQMEDDFENAIWNCLENTNGCSEDDILKAVCRSPLMVMLPAFVEGEGGPPESLSALEEQDLFAVVEGECAGASTVPPLIKKEVPAEVRQPVHEQTHRFDPDDRGSPKVFMEVGRIEPPSTTTVVQMPVPAPAAEGGGGGEGNNIDRVSEPPVLHVALRTSGADKAFQCSCGKVYRHSGSLSKHIRVLRNRLSTQPNQSGCGNVGKVNTAVNEKARENNATNANVNCNTTDMQPRELSVSASQKEDSSGQNFVLNTGCFQGGNNNIINNNGNTSPSMQSNVTVGHCNSLAPFPLPSQVQVNRTANTNVQCNIMDMQQSQLEVAIPQVKKENDCGQNYALNSIGFQGNNKIAENRNANVQSNKAVGLCNSLSAIPPSSQVQTLRTTNMTVQSNMTEMQHGQLKAAISPLSNASSGQNFALGARGFQESINSINNGNLSPNVQNIKTMDHGRFFEAVQPTSNFSSILSSVPLSNSPEQNGMRNVESNMNASQYNSLTTTQYAIQANPGPVTQTSAAGSNSAEQNELRNTNHNGIDRQYSSLAANPHVSHYSSGHMSTPIPAVRVTNNTGQNGLRNASTIGGNSTDRHYTSLATVPHVSQVSNGHGALTAVQDNVGQNVGRNPNVDCNLIVGQYYSVAAVPQVNQISPNRFNVSDNISSGQNRMSDSSVENNMPANQYSVIPTPTPTVNQTVSGGYSSAPANAVLINYSTGQNGIGNAYVESNLADRLYSPHVGSLPVSQASSGHVNTLISGGQRSSSTAHNGMRNTNSERNMTDRQYTMLETVPHASQASSGLINALATAVRDSNSCVQNGTRLSNMESNMSGRHYTTLLTVPPMNQASTEHVSTVVNSVQGSISSGQDGTRNSNIGSNATHKHYTMLESVPHMSQDNSGYVSALTTHVQNSSTTNQNRIRITSVESNMTVNQYNSQTGTPLVSQINKALASVMQNSNRAGNEMKNVSAEVSVNNWQQQANTVVTGKCDNPIDRAGARAGPLRPSTKIAANNQVVKNAGCNFKLSSNKVPSSLEACSKDTDPYRSKFSKLPASEGSGYNCFCGVSFQNLTTLLTHVENHSKEEFELYSTQAILHIKDPAPKDNTNFCSDLSNKCNTCGIWFEDNVQLNLHMESHVKVDCNEQTILNIEEDNFISSSNNDRDNNERTYQCAICDKIYKEFTDLMMHMEIHQKSVTDEQETGICKGWNDARNRCVRETPEPQEMLNYQCGLCKKRFKKLRYLTSHMRCHTKTTCPGKTKKFQEPLVHGRINSSACDVSISNDPAKRMKITQVPLTQQKKSVNNITSSSGNSIPLTSLDHLQQNNMHLVNSKNTINTKRPFISTKPNHQYKKTVLTMERGTSTHPDTCSTTGGPMSIRVQAALTDISQEANRRTNENHEDIGSPPTATSVTKAATLSGESKTFSCICGMVFRTSCALAAHTTDHIGRREYFCDICGKLFRQKCILLSHLRYHSYQKAYKCCKCSRSFERHSDFMAHKRLYRVNASCYVCRKKVTRAVCGANHTLPFQNKTFLCVDCNGSTVPDNPDETRDKLGRFTRKHGSSSGGVGGEIGDKGESEATKSVLSCTICKSVFTDSKSLLIHSHSHLGECAVLLERLNTAEIYKRSYNCGRNEGTVKVASSHPPKASAAGIQISNRLSKAVGKKRFTWKCRCGGVFKWRSSMKKHLCKYTGHQCVVCRRLFRRFASLRDHMRSHTGRRKYKCTTCTESFSRLRDLEVHQHCHAEKAPMGNVEACKANSQIEPDEAEKGSEELGEPQENHGSSEVNSLEKENPGNTNLLQPPGPNPISLLGNEGPNCTTFPENCIQNGAIHGLVEQSTLPACSPSDVGRDRALDCETKEDCGAKRLEIQSHKECNLEKTISGNVNPQLCCRQQLTSSEGASPGEDKLKGVKPEPSFLLEFDKQLNELQLALSTEDSNSKTGSIEGTREVLGCGITPARCHSAPVEYLNLQVKQEHSMDSNKNFQLNPHKKESQFGSEQSNDGQSTTLQVGLDSEGECVESKFDPKTMSSDLKSNGSDRIKKELTLAQPSEKSFSTVESGGGSASRPEVDRMAVNCGVNSLQNYCSQETVKQDAEQTNKDKDLLSINDRVVKKENLFQVCKREPDAQPPGESEKEDDKTLGALELQQICPSKKTALVDLVSDDEDQHTTSGSHLHPCKKHCSEKLRSDLCEHTSKMPSSSPKVYQICDSDVEEESVSHPCPQSKSESDDVMLVEETSKKKKPPPEVYEISDSDEEEGKEGNHRCSKAQSPYVDQEITRSHSNKTLFEAGQNLVHDDHKPSLDAETSSFACDVCMKPFPDSDALQVHKHIWGKVPCNINKWRTTTQNKPKSEKGAETIGSAGRVKRESMMGEESRPSSAPESTQTSGENLRECPCSEKTQCCCKSKCQRQEHRDKATGVHVCRACGKSFAQKDFLIDHLHEHIDGRKYRCKYCSKTFQRSVKLAVHKLRCSQRKMSAKKVKPASDDDDVETNKGTSFPRSFAVPFVGVQPQTVPMLVSVPVLVSSAMTWGNIVTLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -