Basic Information

Insect: Gryllus bimaculatus
Gene Symbol: -
Assembly: GCA_017312745.1
Location: Scaffold243:246760-292724[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.9e-05 0.0023 18.9 8.4 1 23 296 318 296 318 0.99

2 11 0.00019 0.011 16.8 3.8 1 23 324 346 324 346 0.98

3 11 0.00014 0.0083 17.2 3.1 1 23 352 374 352 374 0.98

4 11 0.00025 0.015 16.4 0.5 1 23 380 403 380 403 0.96

5 11 0.016 0.97 10.7 4.2 1 23 415 437 415 437 0.98

6 11 0.00012 0.0071 17.4 0.2 1 23 444 466 444 466 0.97

7 11 1.4e-05 0.00082 20.3 2.6 1 23 472 494 472 494 0.97

8 11 7.9e-06 0.00047 21.1 0.2 1 23 500 522 500 522 0.97

9 11 0.28 17 6.8 1.6 1 17 528 544 528 554 0.91

10 11 8.1e-06 0.00048 21.1 0.1 1 21 554 574 554 575 0.96

11 11 0.0016 0.092 13.9 0.4 5 23 591 609 590 609 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.9e-05	0.0023	18.9	8.4	1	23	296	318	296	318	0.99
2	11	0.00019	0.011	16.8	3.8	1	23	324	346	324	346	0.98
3	11	0.00014	0.0083	17.2	3.1	1	23	352	374	352	374	0.98
4	11	0.00025	0.015	16.4	0.5	1	23	380	403	380	403	0.96
5	11	0.016	0.97	10.7	4.2	1	23	415	437	415	437	0.98
6	11	0.00012	0.0071	17.4	0.2	1	23	444	466	444	466	0.97
7	11	1.4e-05	0.00082	20.3	2.6	1	23	472	494	472	494	0.97
8	11	7.9e-06	0.00047	21.1	0.2	1	23	500	522	500	522	0.97
9	11	0.28	17	6.8	1.6	1	17	528	544	528	554	0.91
10	11	8.1e-06	0.00048	21.1	0.1	1	21	554	574	554	575	0.96
11	11	0.0016	0.092	13.9	0.4	5	23	591	609	590	609	0.96

Sequence Information

Coding Sequence: ATGGATCGTCTGGAAATTTTGTCTGAATGCCTGATTAAAGTAGAAAACGTAAAACAGGAACCTGATGAATGTGGCAGAGAGGAAGCATGCAATTTCATGGGAGGAGAGAAGACTTGTTCTTTGAAGAGTGAAGTGAAAAAGAAAGGGAATGAAGTGTTCTGTCATTTGCAGGAAGGGGAGAGAACCTGTCCTTTGAAGAGTGAAGTGAAAGAAAAAGATGAAGAGGAGGAACTAAAGCCATCAGTTCGATTGTTTTTGGATCCCGAAGAAGTGCCTGAACAAGTACCACAGGAACACAAGGACCCTTTGGCAATGTGTAATGAAAATCTTGACAAGAGCTCATGGCCAGTTGGTGATGAATGTGATCCAGAGAGGCTCATATCATCTGTTTCAACTCACAATGGCCCAGAGAGCCTGAATTCAGATAATGCCATTCATGCAAACACACGCTCTGTCAGTAAAAGTGTTATTAAATTAGAAGAAATTAAGCAAGAACCGGAGGACTCTGTTACAGAGCCTGTTTGGAATTCAACACACCTCGAGGACTCCGTAAAGACTGAATTGAAAGAAGATGATGATGAGGAGCTTGAGCCCCCAGTTACAATCTTTCTCCAGGAGGACATTAAGGAAGAGGTGGAGTGGGGCGAAGAAGAAGAAAAAGAGGAGGTGGAGGATAACTTGTGTGGGAAGGATTTCGATGTTGGCTCTGAAGGGAACAATAGAAACTCAGGGTCCGTAGGTACGTCCAAAAATGTCGAGCCAGCCAACCAGGCGAAAATTGAAAATGGACCTGGGAAGCAAGTCGAAGTTGAAGTTGAAGTTCCAAAAGCTGACCCTACTTCTCAAGTATCTCCTTCAAACAATCTGCCATATCCACAGAGAAAATATACTTGTTCTTATTGTTCCAAGACATTCCGACTTCAATGCCACTTGAAGACACACATAAGAACACATACTGGAAGTAAACCCTATAGCTGTCCGCAGTGTCTGTCGTGTTTTTCCCAGATGGCACATCTGCAGAAACACATGAGGGCTCATTCTGGAGAGCGGCCTCACCAGTGCCAGGTGTGCAACCGTGCGTTCAAAGAGCGATATCAACTTGTTACTCACCAGTACACACACTCCGGGCAATGGCCCTACAGATGCCCAGTCTGTGGGAAGGGGTTTGCCTTCTATACGCGTCTCAGCAAACATGCACAAGTCAAGCATCAAGAGGCGGCCGCCCCCCCTGCGCCGCGCCGCCACGAGTGCGGCGTGTGCCGGAAGCGCTTCGGCTGCAGCTCGCACCTGGCGGCGCACGCGCGCACCCACGGCGCGGAGCGGCGGCGCTTCCGATGCGCCGCCTGCCCCAAGCGGTTCGCGCGCCGCCAGGCCCTGGAGCGGCACGCGCGCGCGCACTCCGCCGACCGGCCTTTCGCCTGCCACGCCTGCCCCGAGCGGTTCGCGCGCAAGGAGCACCTGCAGCGCCACGCCCGCACGCACACCGGGGAGCGGCCGTTCGCGTGCGGCGTGTGCCGGCGCGCCTTCATCCAGAAGGACGGGCTGGTGAAGCACATGCGCAAGCACTCCGGGGAGCGGCCGCACGCGTGCGCGCTCTGCACCAAGACCTACTCGCAGCGGAGCGGGCTGAAGGACGGCCTGGCCATTCACAAACGGAAGCACTCGTGCGAGGTGTGCGGCAAGGACTTCGCGCAGCGCAGCAGTTTGGTAGTGCACATGCGCGCGCGCACCGCGGGGGAGGAGGTGCCGCAAGCGGTGGTCGAGCGAGCCGTGTGCCAGGAGCGGTTCGCCCGCGAGGAGCACCTGCAGCGCCACGCGAAAACACACACGGGGGAGAGACCCTTCGCGTGA
Protein Sequence: MDRLEILSECLIKVENVKQEPDECGREEACNFMGGEKTCSLKSEVKKKGNEVFCHLQEGERTCPLKSEVKEKDEEEELKPSVRLFLDPEEVPEQVPQEHKDPLAMCNENLDKSSWPVGDECDPERLISSVSTHNGPESLNSDNAIHANTRSVSKSVIKLEEIKQEPEDSVTEPVWNSTHLEDSVKTELKEDDDEELEPPVTIFLQEDIKEEVEWGEEEEKEEVEDNLCGKDFDVGSEGNNRNSGSVGTSKNVEPANQAKIENGPGKQVEVEVEVPKADPTSQVSPSNNLPYPQRKYTCSYCSKTFRLQCHLKTHIRTHTGSKPYSCPQCLSCFSQMAHLQKHMRAHSGERPHQCQVCNRAFKERYQLVTHQYTHSGQWPYRCPVCGKGFAFYTRLSKHAQVKHQEAAAPPAPRRHECGVCRKRFGCSSHLAAHARTHGAERRRFRCAACPKRFARRQALERHARAHSADRPFACHACPERFARKEHLQRHARTHTGERPFACGVCRRAFIQKDGLVKHMRKHSGERPHACALCTKTYSQRSGLKDGLAIHKRKHSCEVCGKDFAQRSSLVVHMRARTAGEEVPQAVVERAVCQERFAREEHLQRHAKTHTGERPFA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -