Basic Information

Insect: Gryllus bimaculatus
Gene Symbol: -
Assembly: GCA_017312745.1
Location: Scaffold61:3524456-3531417[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0004 0.024 15.7 7.0 1 23 350 372 350 372 0.97

2 18 0.1 5.9 8.2 0.4 1 23 375 397 375 397 0.98

3 18 1.2 71 4.8 4.1 1 20 623 642 623 645 0.93

4 18 3.3e-06 0.00019 22.3 2.4 1 23 653 675 653 675 0.98

5 18 0.0029 0.17 13.0 1.8 2 23 684 706 683 706 0.95

6 18 0.094 5.6 8.3 3.9 1 23 710 732 710 732 0.97

7 18 0.18 11 7.4 0.9 2 23 736 758 735 758 0.88

8 18 0.00027 0.016 16.3 9.0 1 23 771 793 771 793 0.98

9 18 0.44 26 6.2 0.5 3 23 802 823 800 823 0.91

10 18 4.9 2.9e+02 2.9 8.9 1 23 827 849 827 849 0.97

11 18 0.024 1.4 10.1 0.5 1 23 855 878 855 878 0.95

12 18 0.62 37 5.7 1.4 3 23 883 903 882 903 0.97

13 18 6.8e-06 0.0004 21.3 0.1 1 23 910 932 910 932 0.98

14 18 0.4 23 6.3 0.1 2 23 939 960 938 960 0.95

15 18 1.2e-05 0.00071 20.5 2.0 1 23 966 988 966 988 0.97

16 18 0.00074 0.043 14.9 2.5 1 23 994 1017 994 1017 0.98

17 18 3.5e-06 0.0002 22.2 1.5 1 23 1023 1045 1023 1045 0.98

18 18 0.00018 0.011 16.8 1.0 1 23 1051 1074 1051 1074 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0004	0.024	15.7	7.0	1	23	350	372	350	372	0.97
2	18	0.1	5.9	8.2	0.4	1	23	375	397	375	397	0.98
3	18	1.2	71	4.8	4.1	1	20	623	642	623	645	0.93
4	18	3.3e-06	0.00019	22.3	2.4	1	23	653	675	653	675	0.98
5	18	0.0029	0.17	13.0	1.8	2	23	684	706	683	706	0.95
6	18	0.094	5.6	8.3	3.9	1	23	710	732	710	732	0.97
7	18	0.18	11	7.4	0.9	2	23	736	758	735	758	0.88
8	18	0.00027	0.016	16.3	9.0	1	23	771	793	771	793	0.98
9	18	0.44	26	6.2	0.5	3	23	802	823	800	823	0.91
10	18	4.9	2.9e+02	2.9	8.9	1	23	827	849	827	849	0.97
11	18	0.024	1.4	10.1	0.5	1	23	855	878	855	878	0.95
12	18	0.62	37	5.7	1.4	3	23	883	903	882	903	0.97
13	18	6.8e-06	0.0004	21.3	0.1	1	23	910	932	910	932	0.98
14	18	0.4	23	6.3	0.1	2	23	939	960	938	960	0.95
15	18	1.2e-05	0.00071	20.5	2.0	1	23	966	988	966	988	0.97
16	18	0.00074	0.043	14.9	2.5	1	23	994	1017	994	1017	0.98
17	18	3.5e-06	0.0002	22.2	1.5	1	23	1023	1045	1023	1045	0.98
18	18	0.00018	0.011	16.8	1.0	1	23	1051	1074	1051	1074	0.97

Sequence Information

Coding Sequence: ATGATCAATCATAGAAATCCAGCTTATGGTAGAAATGAAAAGCTGGATAACTTCGCATTTACCCAGCCTTCAGAAATAATCTGTTTTATATGCGACGAAACAGTTATGGGCAAGGGAGTACCATTGTTGATGACATATACTCCTTATTCAAACACCGATCTTCCAACAAAAATTGGACAGCTAATGGGTGATGGATTTATGGTAATAGTCGCTGTAACTGATGTGTTATGTAAACGCTGTACATCTTTAATCAATTACCTAGACAAATTAGAATGTGACTCATCAAAAGTAAGAACAGCATTAACAGAATTCTTAAAAATTAAATATCAGTTGGATGATGAAAGTGATACAGAGCAGAGAAATGTACAAGGAAGTGACACCATTCCTCCAAGAGGCGGTAATGAGAATCAGTTTGGAGATGGCTGTGAAGAAGATTCTGAAAAATTCCAGTGCTTTGGTACAAAGGCTCTTGTTGCAGATGAAAGTACAGATGATTTAAAATATAACTTCATTTCGCAAGGAATTAAAACAGAAAATTTGAAATTAGAAGACAATTCTAGTATATCAGATGTAAAAATAATAGTTGTGAACAGTGAAGAATTACATGATAAATGTAATGAAAAATATGAGAATTCCTTAACCAAAGGGCAGTATGAAATGTTAGAAGCAGATAATTCTTATGAATATGTAGAAATGGTTGATGGGTCAGTAAGTGCTGAAACAATATATGAGTGTAATGCATGTTCTTTTAGTACTCCAGTTTTAGATATTCTTCTAGAGCATTTTCAAAGCCACTCGGAACAAGATCTGCACAAATGCCCAGAGTGCTGTCAAATGTTTGAATCTCAACTGGAAATGGAATGTCACAGTAAACAGGTCCATGGAGCTTCAGAAACGCAGTATAGTGAAGATACAAGAGAACTTGAGAATGATCCTGATTATTACCCTACAACCCAAAAAATGTATGAATGCCATATATGTAAATATCATCATAATAATAAGAAAGTTTTTGATGTTCACATGCGTAAACATTCAAAATATGAAAAATTTCAATGCAAGAAGTGTTTGAAAAGTTTTAAACATAGAATGTCACTGAAGAAGCATATGTTTCTTCACAAATCATTTAAATGTGGCTTCTGTACAGCATTATTTCAAAGCGAGATAAGTTTAGAACAGCATTTAAAGATTCACAAGCAGAGCTCAAATAAAAATTGTGTAAGAGATGAATCATTTTCATATGTTGCTCCCATTGTAGATGTAGTTGGCAGTAGTAATGAGGCTGCAGGAGGGGAAAACATAATAAAGACAATAGATGAAGATGAAGTGAATGAAAACATTAAGAGTGTAAACAAGCAAATGTCAAATGTTGAGGAAGATCAGGTGGAAGTTTTGTTGGAACAAATGCATTCAGAAGTTCAGCAGGAGCCCTTTGTTAAGAACAATATTGTTAATAAACCTAATACTTGTGAGCAGAACACAACATTAGTAATGAACGAAGAGAATCTTATTGACGGGTCTGAAATAAATGTTTCACTAGTTCAGCCTTTGGCTACCTCAGTTAGTGACAGAGTGTCAGCAAAAAATGAAAACAATTCTTCTGTTTACATAGTTGAATCACAGGTTAATTATAACTTTGAGGACAAAAAGCATGAAAAGGAGGAAGAAACCAATTGTTATAATATTCTCAATGTTTTAGACAACAATTGCACCTTTGAGGATTCGGGATATATTGAGGCAGATAGAGATACAAAACCAAATACAACAAATTCAGAAAAGAAACATATTGATGTTGAATTTAAAACATCCAAAACAGACTTGAGCAATTTGAGTGAGAGTGATGGAAGTAAGACTGTTTCCCGAAAGATATACATGTGTTCTTTGTGTGGATTAAAAACAACATCTGAAGCACATATTAAGAGGCATTTCAAGTGTCACATTGCTTTAGAGAGGAAGACTTACAAGTGCCATATTTGTGAGCGTGTTCTCACCACTCGTAGCAACCTCAAGCGGCACATAAGTCTCCATGAACGATGTTCAAGTGGAGAGGTAGAGTGCAACATGTGTAATGAAGTGTTAACAGATCGATTGCATTTGAAACATCACATGGAGGTTAAGCATCCAGAGTCTTATCAGTGCTCCTTTTGTGACCGCCGGTTTGATAGTAAAAGGGCATGCCGAGAACATGAATTAACACATCCAGCTCTACAGTGTAACATTTGTCAAAAGATGTTCTTGACTGAGGGACGTTTAAAGAGCCATAAATTGTTCATGCATAGTGAAACAGGTCAGTCTGCAACAAGATCTAAAGTTTTTAAGTGCCATATATGTCATAAAATCCTTACAACTTATCACAATCTCAAGCGTCATTTGAGAAATCATGAAAAATGTTCTGGAGCAGTTAATTGTGCACTTTGTAATGAAGAATTAACGGACAAATTGCATTTGCGGCAGCATGTGGAGGAAAAGCATCCAGAAAATCATCAGTGCTCTTTTTGTCATAGAGTTTTTGGCAGTCGAAAATCATGCAAGTCACATGAAATGACACACCCTGAACGTTTTGTGTATAAATGTGAATCTTGTGATAAGGTATTTCTAACTGAAGCTCGAATGAAACGTCATCAGGATGTTATGCATAGGGATCCTCACTGTCGAATTTGTGGTAAAGAAATATCCAATATGTTGAAACTATTGGATCATGAGAGACGCCATGAACGACACAAAGTTATGTTTCCTTGTGGTCAGTGCCCTAAGATTTTCCGCACTCCATCTGGTCTGAAGTATCATATGTCAGTACATACTGGCAAGTATGCTGTATACTGTGAAATCTGTGGAAAGGGGTTACATTCAGAGGTAGTTCTTGAAGAGCACAAAGCAACTCACACGAAAGAAGTACGTTATACTTGTGAGAAATGTGGTCGAACATTTTCATCAAATAGTACATACCGCATGCATCGGTTATGGCATGACAATCCCTTACCTTACAAGTGTAACATCTGTGACAGAAAATTCAAACACACTTCAATTTTGGCTGTTCACAAACGTCGAGCACACACAGGTGAACGTCCCTACCAGTGTCCCCATTGCAGTCAGACTTTTAGTGTTAGCAGTACACTGAACAAGCACATCATTTTGCACACTAAAGAATATCCTTACCGGTGCAAACTTTGTGAAAAAGGGTTTACGACCCGCACTAAGATTGCAAGACATATGGCGAAAGTTCATAACGATTTTGAAATGCTGAACTCCAAGAAGAAAACATGCGAGTACAAAATGGTTCTTCATCCTAGTGAAATCTCTGGGGGGCCAAGGCAGAGTGAAGAGGAGGATGCCGGATTCATCTCAGTAGAACAGATGCTCCAAGATGAGAAAGTTGGGGAGCAGGAAGAGGATGAAACACAGACAGCCACACTACAGGTGCTGGACCCAGCACAAGCTGCAATTTTCACAATTTTCCAGCAGGACTTGCCTAGCTCTGACTTCAGTCTAAATGAATTTGACACTGTTCCAAAGTAG
Protein Sequence: MINHRNPAYGRNEKLDNFAFTQPSEIICFICDETVMGKGVPLLMTYTPYSNTDLPTKIGQLMGDGFMVIVAVTDVLCKRCTSLINYLDKLECDSSKVRTALTEFLKIKYQLDDESDTEQRNVQGSDTIPPRGGNENQFGDGCEEDSEKFQCFGTKALVADESTDDLKYNFISQGIKTENLKLEDNSSISDVKIIVVNSEELHDKCNEKYENSLTKGQYEMLEADNSYEYVEMVDGSVSAETIYECNACSFSTPVLDILLEHFQSHSEQDLHKCPECCQMFESQLEMECHSKQVHGASETQYSEDTRELENDPDYYPTTQKMYECHICKYHHNNKKVFDVHMRKHSKYEKFQCKKCLKSFKHRMSLKKHMFLHKSFKCGFCTALFQSEISLEQHLKIHKQSSNKNCVRDESFSYVAPIVDVVGSSNEAAGGENIIKTIDEDEVNENIKSVNKQMSNVEEDQVEVLLEQMHSEVQQEPFVKNNIVNKPNTCEQNTTLVMNEENLIDGSEINVSLVQPLATSVSDRVSAKNENNSSVYIVESQVNYNFEDKKHEKEEETNCYNILNVLDNNCTFEDSGYIEADRDTKPNTTNSEKKHIDVEFKTSKTDLSNLSESDGSKTVSRKIYMCSLCGLKTTSEAHIKRHFKCHIALERKTYKCHICERVLTTRSNLKRHISLHERCSSGEVECNMCNEVLTDRLHLKHHMEVKHPESYQCSFCDRRFDSKRACREHELTHPALQCNICQKMFLTEGRLKSHKLFMHSETGQSATRSKVFKCHICHKILTTYHNLKRHLRNHEKCSGAVNCALCNEELTDKLHLRQHVEEKHPENHQCSFCHRVFGSRKSCKSHEMTHPERFVYKCESCDKVFLTEARMKRHQDVMHRDPHCRICGKEISNMLKLLDHERRHERHKVMFPCGQCPKIFRTPSGLKYHMSVHTGKYAVYCEICGKGLHSEVVLEEHKATHTKEVRYTCEKCGRTFSSNSTYRMHRLWHDNPLPYKCNICDRKFKHTSILAVHKRRAHTGERPYQCPHCSQTFSVSSTLNKHIILHTKEYPYRCKLCEKGFTTRTKIARHMAKVHNDFEMLNSKKKTCEYKMVLHPSEISGGPRQSEEEDAGFISVEQMLQDEKVGEQEEDETQTATLQVLDPAQAAIFTIFQQDLPSSDFSLNEFDTVPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -