Basic Information

Insect: Gryllus bimaculatus
Gene Symbol: -
Assembly: GCA_017312745.1
Location: Scaffold66:4580730-4598545[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00046 0.027 15.6 0.1 1 19 167 185 167 187 0.96

2 11 3.3e-07 1.9e-05 25.5 1.7 1 23 226 248 226 248 0.98

3 11 1.9e-05 0.0011 19.9 0.6 2 23 255 276 254 276 0.96

4 11 1.3e-06 7.7e-05 23.6 0.6 1 23 282 304 282 304 0.99

5 11 2.2e-06 0.00013 22.9 1.9 1 23 310 332 310 332 0.99

6 11 0.0014 0.085 14.0 5.8 1 23 338 361 338 361 0.98

7 11 6.4e-07 3.8e-05 24.5 1.4 2 23 383 404 382 404 0.97

8 11 0.00017 0.01 16.9 0.5 1 23 410 432 410 432 0.99

9 11 3.5e-06 0.00021 22.2 0.3 1 23 438 460 438 460 0.98

10 11 2.2e-06 0.00013 22.9 1.8 1 23 466 488 466 488 0.99

11 11 0.00025 0.015 16.4 0.9 1 23 494 517 494 517 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00046	0.027	15.6	0.1	1	19	167	185	167	187	0.96
2	11	3.3e-07	1.9e-05	25.5	1.7	1	23	226	248	226	248	0.98
3	11	1.9e-05	0.0011	19.9	0.6	2	23	255	276	254	276	0.96
4	11	1.3e-06	7.7e-05	23.6	0.6	1	23	282	304	282	304	0.99
5	11	2.2e-06	0.00013	22.9	1.9	1	23	310	332	310	332	0.99
6	11	0.0014	0.085	14.0	5.8	1	23	338	361	338	361	0.98
7	11	6.4e-07	3.8e-05	24.5	1.4	2	23	383	404	382	404	0.97
8	11	0.00017	0.01	16.9	0.5	1	23	410	432	410	432	0.99
9	11	3.5e-06	0.00021	22.2	0.3	1	23	438	460	438	460	0.98
10	11	2.2e-06	0.00013	22.9	1.8	1	23	466	488	466	488	0.99
11	11	0.00025	0.015	16.4	0.9	1	23	494	517	494	517	0.97

Sequence Information

Coding Sequence: ATGTCATCAGAAGTTTCTTCACAAGAGAGACCAGCCGTGATTTCGATTACGGGGGAAATTGAGAATCCTCGACATGTGGAAAAGCAAAAAGAAACTCGGGGGGCTCAAACTTCTACAGAAGATATGCCTGTAAAGGCAGAGAATCGATCAGAGGAGGATATGAGAACCCGAAAACCAGTAGCAGATGTGGGAAACCTGAAGGAGGAAAGTAATTCTGAGGAACCTGACCACCTGGGGGTGAATCTGGACGCTGCCAGTCCTGTGCCTTTTGATTCCTGGTTGCATGTCATTATGGAAGAGAGGGCTGTAGGAGAAGTACAGGTCCTAGGTGCTGTAGGCTCTGATAAAACAGAGGTTGGTACCAGGCATATGGTAGACAGAGCAAATGGGCCACGGCTGATTGCTGCAAGTGGTTTTCAGGAATCTAGATCTCGAAATGCTCTTTCTAGGCGCAACAGAAATGAAAATGGAACAAATGCACTTCAAGAACGGGCAGCTTTTCCATGTACGGATTGCGGGCTGTCATTTGCAAGTGCAGTTTATCTTAAGTCACACTCCACTCATTGTCGTCAACGTCGTGCTCCAGCATACAGAAATCACCTTGATTCATCAAGTACTCTAAATATTGGTGCAAATCCTCAACAGAATCCAGATTTACATGTTGGGCAAATGCGCTTCAGTTGTGAACAGTGTTACAAAGCTTTCTCCTCTGCATACAATCTTGAAAGACATCGCCGAACTCATAGTGGTGAACGACATTGTGAATGTCAAACCTGTGGAGCGGCATTTGCGGACCCATGGCATTTACAGAGGCATGAGCGAATTCACACTGGTGAAAGACCATATCGTTGCAATCTTTGTGGCGAATCCTTCACGGAGTCAGGAAAATTGAAAAGACATGAACGTATTCATTCAGGTGAACGACCCTACCGTTGTGAAGTATGTGGAATGGACTTCAGGGTATCTAGTCATCTCAAGACTCACCGTCGAATTCACACAGGAGAACGCCCCTACCAATGCACTGAGTGTAGTCTTAGCTTCATCAGTTGTAGTGTGTTGCATCGACACAGACGGAAACAACATGGTGTGCCTTCCATACCTGGGGCAATCAGTGATTCCACCCGTCACTTTCCAGTCCTGCTTCTCTCTTGCGAATTATGCCACAAGGCCTTTTCGTCTGCATATAATCTGGAAAGGCATAGGCGAATTCACAGAGGAGAGAAACCCTACAAGTGTCAGACTTGTTCTGCTGTATTTGGAGACACTTGGCTATTAAAGAGGCATGAGCGTACTCATACTGGTGAACGACCTTACAGATGTGATGTATGTGGTGAAGCTTTCATTGAATCCAGTAAATTGAAGAGACATTCACGGGTTCACACTGGGGAAAGACCTTATCGATGTGAAATATGTGGGACTGAATTTAAAGTTTCTAGTCATCTGACAATGCACAAAAGAATTCACACTGGGGACAAGCCCTACCAGTGTGAAGAATGTGATAAAGCTTTTGCTAGAGGAAGTATTTTACATCGGCACAGGCAAAGGGTTCATGGCGTGCCTGTTCCTGTACCAACATGCATCAATGCACCAGGTGTATGTTCATAA
Protein Sequence: MSSEVSSQERPAVISITGEIENPRHVEKQKETRGAQTSTEDMPVKAENRSEEDMRTRKPVADVGNLKEESNSEEPDHLGVNLDAASPVPFDSWLHVIMEERAVGEVQVLGAVGSDKTEVGTRHMVDRANGPRLIAASGFQESRSRNALSRRNRNENGTNALQERAAFPCTDCGLSFASAVYLKSHSTHCRQRRAPAYRNHLDSSSTLNIGANPQQNPDLHVGQMRFSCEQCYKAFSSAYNLERHRRTHSGERHCECQTCGAAFADPWHLQRHERIHTGERPYRCNLCGESFTESGKLKRHERIHSGERPYRCEVCGMDFRVSSHLKTHRRIHTGERPYQCTECSLSFISCSVLHRHRRKQHGVPSIPGAISDSTRHFPVLLLSCELCHKAFSSAYNLERHRRIHRGEKPYKCQTCSAVFGDTWLLKRHERTHTGERPYRCDVCGEAFIESSKLKRHSRVHTGERPYRCEICGTEFKVSSHLTMHKRIHTGDKPYQCEECDKAFARGSILHRHRQRVHGVPVPVPTCINAPGVCS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -