Basic Information

Insect: Gryllus bimaculatus
Gene Symbol: -
Assembly: GCA_017312745.1
Location: Scaffold54:2905515-2964927[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00023 0.014 16.5 0.1 1 23 141 163 141 163 0.96

2 13 2.5e-06 0.00015 22.7 0.7 1 23 222 244 222 244 0.98

3 13 1.5e-07 9e-06 26.5 1.1 1 23 250 272 250 272 0.98

4 13 4.1e-06 0.00024 22.0 0.6 1 23 278 300 278 300 0.98

5 13 1.5e-05 0.00089 20.2 0.9 1 23 479 501 479 501 0.97

6 13 1.1e-06 6.2e-05 23.9 1.5 1 23 507 529 507 529 0.98

7 13 7.9e-07 4.7e-05 24.3 1.5 1 23 535 557 535 557 0.99

8 13 0.06 3.5 8.9 3.5 1 23 563 585 563 585 0.95

9 13 1.7e-06 0.0001 23.2 0.4 1 23 591 613 591 613 0.99

10 13 1e-06 6e-05 23.9 0.8 1 23 619 641 619 641 0.98

11 13 3.2e-07 1.9e-05 25.5 0.4 1 23 647 669 647 669 0.99

12 13 2.3e-06 0.00013 22.8 0.5 1 23 675 697 675 697 0.96

13 13 0.038 2.3 9.5 0.8 3 23 705 726 705 726 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00023	0.014	16.5	0.1	1	23	141	163	141	163	0.96
2	13	2.5e-06	0.00015	22.7	0.7	1	23	222	244	222	244	0.98
3	13	1.5e-07	9e-06	26.5	1.1	1	23	250	272	250	272	0.98
4	13	4.1e-06	0.00024	22.0	0.6	1	23	278	300	278	300	0.98
5	13	1.5e-05	0.00089	20.2	0.9	1	23	479	501	479	501	0.97
6	13	1.1e-06	6.2e-05	23.9	1.5	1	23	507	529	507	529	0.98
7	13	7.9e-07	4.7e-05	24.3	1.5	1	23	535	557	535	557	0.99
8	13	0.06	3.5	8.9	3.5	1	23	563	585	563	585	0.95
9	13	1.7e-06	0.0001	23.2	0.4	1	23	591	613	591	613	0.99
10	13	1e-06	6e-05	23.9	0.8	1	23	619	641	619	641	0.98
11	13	3.2e-07	1.9e-05	25.5	0.4	1	23	647	669	647	669	0.99
12	13	2.3e-06	0.00013	22.8	0.5	1	23	675	697	675	697	0.96
13	13	0.038	2.3	9.5	0.8	3	23	705	726	705	726	0.95

Sequence Information

Coding Sequence: ATGTTTCTTGATGTCTTAGTTCCATCCAGGGATGAAGATGAGCCCAGCCCAATGCCGTATTCAATAAAGCAAGAAAATATAGATGAAGAGGAGTTGGAACCTCCAGTTGCTGTGCTCGTTGAGCCAATCAAGAAGCACGAGGAAGTTTGTTTCAAGGAAGAGACGGATCCTCTTGCTCCTGACTGTGATAGTGTTGCTACTGCGTCAATAAAACTAGAGGACGGGTTCAATGTTTCAGAGGACGAGGACCAGGCGATGAAGTTAGCACGAAGCCAGGGGCCTTGCACGAGCGCCAGCCGCGGCGTCTGCGGAGCATCTCCCAGCGCGTCCAGCGACCCTGCTCTTCCCACGCTGGATGCAGAGCGCCAATATTCCAAGGCTCTCGCACTTCACAAGCAGCGGCACAAGTTGGAGAGGCCTCATCCGTGTGACGTGTGCGGGAAGGCTTTCACTACCGCAGCAGCTGTCGCCCTTCACAAGCGCGGGCACAAGGGGAAGCTAAAGCGCGCGCAAACATCCGACGTGACCAGAAAACCACTTGTGAAGGCAGCTACTCGTGCTATTCACAAACGCAGTAACACGAGGACGGGGCCTCATTCATGCAACGTGTGCGGGAACGGCACTCTCATCCAGCACAAGCGCATTCACACAGGAGAGTGTCCGTTTTCATGTAATGTGTGTGGCAAACGTTTCAAAGAATCGGGCGCTCTCGTCAATCACAAGCGTACTCACACGGGAGAACGACCGTATGCATGCCATGTGTGTGGAAAAGGTTTTAGTGGCTCAAGTAACCTCGCCAGGCACAAACGTACGCACACTGGAGAGAGGCCGTTTTCATGTGATCTGTGCGGAAAGTCTTTTAAGGAGTCGGGCACCCTGGCTGAGCACAAGCGCACTCACACGGAAGAGGATATTAAAATTAAAATGGAACAGGCTGAAGATGAGCCCAGCCCAGTACCGTATTCAATAAAGAAAGAAATTATAGATGAAGAGGAGTTGGAACCTCCAGTTGCTGTGCTCGTTGAGCCAATCAAGAAGCACGAGGAAGTTTGTTTCAAGGAAGAGACGGATCCTCTTGCTCCTGACTATGATAGTGTTGCTACTGCGTCAATAAAACTAGAGGACGGGTTCAATGTTTCAGGCGCCGAGGGCTCTCCGCCGTCAGAGGACGAGGTCCAGGCGATGAAGTTAGCACGAAGCCAGGGGCCTTGCACGAGCGCCAGCCGCGGCGTCTGCGGAGCATCTCCCAGCGCGTCCAGCGACCCTGCTCCTCCCACGCTGGATGCAGAGCGCCAATATTCCAAGGCTCTCGCACTTCACAAGCAGCAGCGCAAGAAGCGAAAGCGCGCGCAAACATCCAACGTGACCAGAAAACCACTTGTTGAGGCAGCTACTCAAGCCATTCACAAACGCAGTATCACGACGAAGGGGCCTCATTCATGCGACGTATGTGGGAAGGTTATCACAACCTTAAGCAACCTCATGACCCACAAGCGAGTACATACAGGAGAACGTCCATATGCTTGCGATGAGTGCGGAAAGGCTTTTAATCAGTCATGTGACCTCACCAGGCACAAGCGCATTCACACGGGAGAGAGGCCTTATTCATGCAACATGTGCGGGAAGGGTTTCACTACCTTACGCAACCTCGTCACACACAAGCGCACACACACTGGAGAACGGCCATATGTATGCGATGTTTGCGGTAAAGCTTTCAGTTGTTTAAACAGTCTGATCTGTCATAAGCGAACACACACTGGAGAGCGGCCGTATTCATGTGATGTGTGTGGAAAGTCTTTTAAGGAATCGGGCACCCTGGCCGAGCACAAGCGTACTCACACGGGTGAGCGGCCGTTTTCATGCGATGTGTGCGGAAATGGTTTTAAAACATCAAGCAACCTCACCGTGCACAAGCGCACTCACACGGGAGAGCGTCCGTATTCATGTAAAGTGTGTGGAAATGCTTTCAAAGACTCTGGCACTCTAGCCAAGCACATGCGCACTCACACGGGAGAGCGACCGTATTCATGCGATGTGTGTGGAAAAGCTTTTTCAGAATCAAGCAACCTCACCGTGCACAAGTTCTCGCACAAGGGACATCAACCGATTGGCTGTGACGCGTGCTCCCTTCGCTTCAGTAGGAAGTCCGCGATGATATCTCACTGGCAACGCTTTCACGTGACAAAGTGA
Protein Sequence: MFLDVLVPSRDEDEPSPMPYSIKQENIDEEELEPPVAVLVEPIKKHEEVCFKEETDPLAPDCDSVATASIKLEDGFNVSEDEDQAMKLARSQGPCTSASRGVCGASPSASSDPALPTLDAERQYSKALALHKQRHKLERPHPCDVCGKAFTTAAAVALHKRGHKGKLKRAQTSDVTRKPLVKAATRAIHKRSNTRTGPHSCNVCGNGTLIQHKRIHTGECPFSCNVCGKRFKESGALVNHKRTHTGERPYACHVCGKGFSGSSNLARHKRTHTGERPFSCDLCGKSFKESGTLAEHKRTHTEEDIKIKMEQAEDEPSPVPYSIKKEIIDEEELEPPVAVLVEPIKKHEEVCFKEETDPLAPDYDSVATASIKLEDGFNVSGAEGSPPSEDEVQAMKLARSQGPCTSASRGVCGASPSASSDPAPPTLDAERQYSKALALHKQQRKKRKRAQTSNVTRKPLVEAATQAIHKRSITTKGPHSCDVCGKVITTLSNLMTHKRVHTGERPYACDECGKAFNQSCDLTRHKRIHTGERPYSCNMCGKGFTTLRNLVTHKRTHTGERPYVCDVCGKAFSCLNSLICHKRTHTGERPYSCDVCGKSFKESGTLAEHKRTHTGERPFSCDVCGNGFKTSSNLTVHKRTHTGERPYSCKVCGNAFKDSGTLAKHMRTHTGERPYSCDVCGKAFSESSNLTVHKFSHKGHQPIGCDACSLRFSRKSAMISHWQRFHVTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -