Basic Information

Gene Symbol
znf711
Assembly
GCA_017312745.1
Location
Scaffold35:7158720-7176287[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 3.9e-06 0.00023 22.1 2.9 1 23 259 281 259 281 0.98
2 25 0.017 0.98 10.6 0.3 2 21 287 306 287 307 0.94
3 25 5.2 3.1e+02 2.8 2.0 1 19 316 334 316 336 0.81
4 25 0.00051 0.03 15.4 0.2 2 23 365 387 364 387 0.96
5 25 8e-05 0.0047 17.9 2.1 1 23 390 412 390 412 0.98
6 25 0.0044 0.26 12.5 5.4 1 23 419 441 419 441 0.97
7 25 0.49 29 6.0 2.8 1 23 513 536 513 536 0.92
8 25 0.00014 0.0081 17.2 1.0 1 23 539 561 539 561 0.99
9 25 0.0073 0.43 11.8 2.6 1 23 569 591 569 591 0.97
10 25 0.29 17 6.7 0.2 2 20 641 659 641 662 0.94
11 25 0.0029 0.17 13.1 1.6 1 23 668 691 668 691 0.97
12 25 0.00048 0.028 15.5 3.8 1 23 758 780 758 780 0.98
13 25 0.0005 0.03 15.4 0.2 3 23 798 818 796 818 0.94
14 25 4.2e-05 0.0025 18.8 0.3 1 23 824 846 824 846 0.98
15 25 5.3e-05 0.0032 18.5 2.8 1 23 852 874 852 874 0.98
16 25 0.02 1.2 10.4 2.7 1 23 880 902 880 902 0.99
17 25 0.00048 0.028 15.5 8.8 3 23 977 997 976 997 0.97
18 25 0.033 1.9 9.7 0.7 3 23 1023 1043 1022 1043 0.91
19 25 0.0039 0.23 12.6 0.6 1 23 1081 1104 1081 1104 0.96
20 25 0.00051 0.03 15.4 0.1 3 23 1163 1183 1161 1183 0.93
21 25 0.019 1.1 10.5 1.6 1 23 1210 1232 1210 1232 0.95
22 25 0.00018 0.011 16.8 2.5 1 23 1257 1279 1257 1279 0.98
23 25 0.00047 0.028 15.5 4.5 1 23 1285 1307 1285 1308 0.96
24 25 0.0001 0.006 17.6 0.5 1 23 1313 1335 1313 1335 0.98
25 25 0.0031 0.18 13.0 3.8 1 23 1348 1370 1348 1371 0.95

Sequence Information

Coding Sequence
ATGAATGGCCCACGCCGAAAACCAAGCAACATGGGAGAAGTGTGTCGTTTGTGTTTGGCTGAAGACGAAATCACTTCGCCAATATTTGGTGAAGAAGATTCGTCATCGGAATCTCAAATTCCTCTGTCCTTCAGGATTATGGCGTGCGTCTCCGTGGAGGTGTCAGAGAGTGATGGATTGCCAAAGGTCATATGTGATAAATGCCTGTATCATGTCAATTCTTGGCATGAATTTAAACAAATTTGTGATGTATCTCAAGCTACATTGAAGGAATGGCAAAATAATGCCAAAGATAACACCTTGCTTGTAGATAAGGATGTTATAATTAAGCAAGAACCAGAAGATCCAGAACCTGAAGAAGATGTAATGGAAATCATTGATGATCCAGTCAACTGTCAATTCATGGTGGAGGATATAAAACAAGAGGTGGACATGTACGGTGAAGAGGCCCAGGATTGTTTATCTGTTGAGGCAGTGGAGGAGGAATGTCTGGATCCTCTTGGTATGCCAGTAGCTTGCACATCTAATTCTATAGCCAAAGATATTGATGATCCTGATGTTGAAGTGGTTCCACAGACAGCAGGTGATGTTTGTCATTTGAGAATTACTGATATCAAGACGGAATGCGGAGATGTTATCCCTGTTGGTGATGTGACAGTTGAACCGACTGAGGGCAGATTATTGCGCAGTGTGCTTCAAGGTAAAGCAAACATACCCATGTATGTCAAAAAGGTACCACCAGAACCACAACTTGCTTATCCGACGGTCAAACCTTTTAATTGCCGTCTTTGTGATAAATCTTTTTCATATGCTTATCTTTTAAAAAGACATCAAAAGACACATAAAGGTGATCGAAATGTTTGTGCTTTCTGTCAAAAAGGTTTCTCAACTCATGCTTCACTTGTTCAACATGTTCGATTCTTTAATGGAGTAACTTCATCTCCATATACTTGTGATCATTGTCAACAAGAATTTGCCTGTCGAACGCAATATCTCTCGCATGCAGATGGCTCTGATGCCAGTGGGTGCAATATTGTGTTGTCTAGCAAAGACCACCCTCAGGAAGTCGAAGAATTGCTAGATGGAAGTGTACAGTGTGAAGTATGTGGTGAAAAGTTTCCTTCTCAGATGCTTCTGAGGCTTCATTCAAGGAAAGAACATCTTCAGTTTTCTTGTCATAAATGTGACAAGTCTTACACAAATGGTGTGGCATTAAGTAACCATTTACGAAGTCATACCCTTGGTGGAGTTAGACACCATTGCGAGTCTTGTACTAGAACATTTCCTACTTATGAACTTCTGAAAAAACACGAGAGAACACACATGAAAGAGAATGCTGCTATGACCATAATTCCTACAGAGATTGTATCCAAATCCTCTGATTATGATTCTCAAGAAGAGGCAAGTGTGCCTCTGTCAGAAATAACAGGATTTTTGGATAGACCAATCAAAGTGGAACCACCAGACAGTCCTGAAGTTATTGATGAACCGCAACCATCTCCAACACCCTCGGGAAACGCTACTTCTCAGCAATCCCATGTTTGTCATTTATGTAATGAACATTTCCCTACAATTGCTTCTTTAAGATTTCATCTGAAAGGTGTTCATTTGCATTATCAATGTCATAGATGCCCAAAGGTTTATAGTAGTGGTGTTGCTTTGAGTAATCATTTACGCAGTCATTCTTTAGGTACTTTTAAAAAGCATAAATGTTTAGCATGCCTAAAATCCTTTTCGTCACTTGAGTTGCTGACAAAACACAAGAAAATACATACCGCTCCAGGTGGCTTACAATCTCTTACAGTTAGAACTCGCAGATTAAATAACTCGGTCCCTTCTGTAGATATTGAACATCAGCTTGAACTACCAAACTTTGAAGAAAATGAGATTGAAGATGTGAATGAACCATTGGTCAAACGTACATGTACAGTATGCAATCTAGTTGCTGCTAGTCCCTCTGCTTTGGGACGCCACATGGCATGTCACACAAAGGAAAAAATGTACACATGTTCCGTTTGTCATGTTTCAATGAGCTACGCATCATCTTTACAGAAACATTATCGCTTGATTCACAATAAGCATGTAGAATTAAGAGCTATTCAGAAAAATTCTGTAGTAGATGATAATGAAATAATACCTGTGCCTGAAACGCAGGAAGTGCCCCAACATGATTCTGGGAAAATTGAAACTACTAGATCTGGTAGAAGAATTATATTCAAAAAGACATTCAAAATGGCAAGCCAGTTACAACAGGCCCAGCTGCCTCTTCCATTTGAATGTAAAGTTTGTCATCGTACTTTTGCTTATCGCTCATTTCTGTTAAGACATTCCAAGGTACATAACAAGGTGACTAAGTTGCCGAAGTTGCCAAAGTTTACTTCTGGTGTTAATTGCCCCATTTGCTTTAAGAGTTTCCCAGATGCTAAAACTCTTAACAACCACAAGGGAGTGCATACTAGATTCAAACATTTTTCATGTAATATTTGTGGGAAATCATTTAATGGTCTGAATGCATGGCAGAAACATGAACGTATGCACCAGAAAGGCTTCATATATTCATGCAAATTGTGTGGAAAGAAGTTCATTTCAAAGGCAGAACTACACGAGCACAAAAAAATGCATATAAAATTAAAAATTTATACATGTGCAGTATGCAAAAATTCATACCATAGTTCATCAGCATTAGGTAAGCACAAACGAAGACATGGACATTGGTATGCCTCTCCAGAAAATTCTGAGGTGTCAGATATAGATATTATAAATGGATATGATTTGACTGTGACAAAGGCTCCTGTTGTTAAGACAACGGTTTTTAAGTCCCCTGTTGTGAAGACCACTCTCCCAAGATCCCTTGTCAATCCTACAATAACCAAAGCTCATTTGTCTAGAAATATGACTCACTTTCCGTCTGGAAAAAGACGACCATGTTGTAATATTTGCCACAAAACATTTAGTCACTTGTCTGCCTTAAGACGGCACAAGCGATTGCATGCTTTAAAGCCAGCTATCCCAGCCACCCCAGAACAAAAATTAAATCCAAATGTGGTTGAAACAGAAGAGAATGCTTGCTTGACTTGCAACAGAACTTTTCCAGATCATGTTTCTCTAGTCCGTCATAAAGGTTGGCATACCAGGAGAGGTAATGTAATTTCTCCAGAACCTGCAGATTCTTCTACTCCTCCAGGAAAACTGCCTATAAATCCCTTATTTGTGAAGGTGGAGCCAGCTTCTAATCATCCTTATCAGTGTCCTTTGTGTCATAAAACAACATTCACAACCGGAGCTGCCTTGGCAAGTCATATAAGATCTCATGCAAATCATGCAAGAAATCGTGCAAAATCTCAGGCAAATCCTGCGAAATCACAGGCTAATCATGCAACTCAATCAGAAGCTTCTTCAAAAGCAGCTGAGAGAAGAACTGAGAATTGGAAAGCAAATGCTAATGCAGAAAAAGGTGAGGTGTTGACATCTCCCAGACGACTTGCTTGCAAGATTTGCAAGAAGCCATTTGAAAGTAAGAAAGCACTTATAACACACATAGGTTGGCATTCTAGAGATTCACATATGGGTAAACCTTTCCATTCTTACAAAAATAAGCTCACTCCCAAAATTAGTTCTATTGATAATTTTTCCTGCAATGTTTGCCACAAAATATTTAGTTCTGCTGTAATTTTGAGCCAGCATAAGAAACTTCACACTCGAAAACTTCTGTCTAGTATCAAGGAAAAATCAGAGCAGATTTCAGAGCTAACAAAAGGTGGTGCACACTATCCTTGTACAGAATGTCATCGATCCTTTAAACTTGAAAAGTACCTGCTACTTCATATGAGATTACATACAGGTGAGAAAAGGTTTAAATGTAATCTCTGTCCACAGGCGTATCATCGGTCAGGATCCTTGTGGAAGCATAAACGAACTCACCACAATGTGAAAGTATTTTCATGTCCTATTTGTCAGAAGCGATTTGGCCTTAAAATCCAGCTCACCAAACATGTTGAAACCCATCAAAATTCTGTTGATTTCTCGCATACTGATACAGTATTTGCATGTAGCAGGTGTGATAAAACATTTACAACTTTACTGAAGTACAAACAGCATGAAAGAGTTCATCATGTCTGA
Protein Sequence
MNGPRRKPSNMGEVCRLCLAEDEITSPIFGEEDSSSESQIPLSFRIMACVSVEVSESDGLPKVICDKCLYHVNSWHEFKQICDVSQATLKEWQNNAKDNTLLVDKDVIIKQEPEDPEPEEDVMEIIDDPVNCQFMVEDIKQEVDMYGEEAQDCLSVEAVEEECLDPLGMPVACTSNSIAKDIDDPDVEVVPQTAGDVCHLRITDIKTECGDVIPVGDVTVEPTEGRLLRSVLQGKANIPMYVKKVPPEPQLAYPTVKPFNCRLCDKSFSYAYLLKRHQKTHKGDRNVCAFCQKGFSTHASLVQHVRFFNGVTSSPYTCDHCQQEFACRTQYLSHADGSDASGCNIVLSSKDHPQEVEELLDGSVQCEVCGEKFPSQMLLRLHSRKEHLQFSCHKCDKSYTNGVALSNHLRSHTLGGVRHHCESCTRTFPTYELLKKHERTHMKENAAMTIIPTEIVSKSSDYDSQEEASVPLSEITGFLDRPIKVEPPDSPEVIDEPQPSPTPSGNATSQQSHVCHLCNEHFPTIASLRFHLKGVHLHYQCHRCPKVYSSGVALSNHLRSHSLGTFKKHKCLACLKSFSSLELLTKHKKIHTAPGGLQSLTVRTRRLNNSVPSVDIEHQLELPNFEENEIEDVNEPLVKRTCTVCNLVAASPSALGRHMACHTKEKMYTCSVCHVSMSYASSLQKHYRLIHNKHVELRAIQKNSVVDDNEIIPVPETQEVPQHDSGKIETTRSGRRIIFKKTFKMASQLQQAQLPLPFECKVCHRTFAYRSFLLRHSKVHNKVTKLPKLPKFTSGVNCPICFKSFPDAKTLNNHKGVHTRFKHFSCNICGKSFNGLNAWQKHERMHQKGFIYSCKLCGKKFISKAELHEHKKMHIKLKIYTCAVCKNSYHSSSALGKHKRRHGHWYASPENSEVSDIDIINGYDLTVTKAPVVKTTVFKSPVVKTTLPRSLVNPTITKAHLSRNMTHFPSGKRRPCCNICHKTFSHLSALRRHKRLHALKPAIPATPEQKLNPNVVETEENACLTCNRTFPDHVSLVRHKGWHTRRGNVISPEPADSSTPPGKLPINPLFVKVEPASNHPYQCPLCHKTTFTTGAALASHIRSHANHARNRAKSQANPAKSQANHATQSEASSKAAERRTENWKANANAEKGEVLTSPRRLACKICKKPFESKKALITHIGWHSRDSHMGKPFHSYKNKLTPKISSIDNFSCNVCHKIFSSAVILSQHKKLHTRKLLSSIKEKSEQISELTKGGAHYPCTECHRSFKLEKYLLLHMRLHTGEKRFKCNLCPQAYHRSGSLWKHKRTHHNVKVFSCPICQKRFGLKIQLTKHVETHQNSVDFSHTDTVFACSRCDKTFTTLLKYKQHERVHHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-