Basic Information

Insect: Gryllus bimaculatus
Gene Symbol: -
Assembly: GCA_017312745.1
Location: Scaffold192:2304732-2314349[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0026 0.15 13.2 10.2 1 23 132 154 132 154 0.98

2 17 6.8e-06 0.0004 21.3 4.8 1 23 160 182 160 182 0.98

3 17 2.7e-07 1.6e-05 25.7 0.9 1 23 188 210 188 210 0.98

4 17 0.0013 0.078 14.1 7.5 1 23 216 238 216 238 0.98

5 17 1.2e-06 6.8e-05 23.7 2.7 1 23 244 266 244 266 0.98

6 17 0.00011 0.0066 17.5 4.0 1 23 272 294 272 294 0.98

7 17 1.1e-05 0.00065 20.7 3.1 1 23 300 322 300 322 0.99

8 17 8.4e-05 0.0049 17.9 2.6 1 23 328 350 328 350 0.98

9 17 1e-06 6.2e-05 23.9 3.5 1 23 356 378 356 378 0.97

10 17 1.2e-05 0.00072 20.5 4.7 1 23 384 406 384 406 0.98

11 17 0.0027 0.16 13.1 1.8 1 23 412 434 412 434 0.99

12 17 5.9e-05 0.0035 18.4 0.3 1 23 440 462 440 462 0.99

13 17 7.8e-07 4.6e-05 24.3 5.3 1 23 468 490 468 490 0.99

14 17 2.6e-07 1.5e-05 25.8 3.6 1 23 496 518 496 518 0.98

15 17 1.1e-05 0.00067 20.6 0.7 1 23 524 546 524 546 0.99

16 17 1.1e-07 6.7e-06 26.9 3.2 1 23 552 574 552 574 0.99

17 17 1.1e-07 6.7e-06 26.9 1.2 1 23 580 602 580 602 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0026	0.15	13.2	10.2	1	23	132	154	132	154	0.98
2	17	6.8e-06	0.0004	21.3	4.8	1	23	160	182	160	182	0.98
3	17	2.7e-07	1.6e-05	25.7	0.9	1	23	188	210	188	210	0.98
4	17	0.0013	0.078	14.1	7.5	1	23	216	238	216	238	0.98
5	17	1.2e-06	6.8e-05	23.7	2.7	1	23	244	266	244	266	0.98
6	17	0.00011	0.0066	17.5	4.0	1	23	272	294	272	294	0.98
7	17	1.1e-05	0.00065	20.7	3.1	1	23	300	322	300	322	0.99
8	17	8.4e-05	0.0049	17.9	2.6	1	23	328	350	328	350	0.98
9	17	1e-06	6.2e-05	23.9	3.5	1	23	356	378	356	378	0.97
10	17	1.2e-05	0.00072	20.5	4.7	1	23	384	406	384	406	0.98
11	17	0.0027	0.16	13.1	1.8	1	23	412	434	412	434	0.99
12	17	5.9e-05	0.0035	18.4	0.3	1	23	440	462	440	462	0.99
13	17	7.8e-07	4.6e-05	24.3	5.3	1	23	468	490	468	490	0.99
14	17	2.6e-07	1.5e-05	25.8	3.6	1	23	496	518	496	518	0.98
15	17	1.1e-05	0.00067	20.6	0.7	1	23	524	546	524	546	0.99
16	17	1.1e-07	6.7e-06	26.9	3.2	1	23	552	574	552	574	0.99
17	17	1.1e-07	6.7e-06	26.9	1.2	1	23	580	602	580	602	0.99

Sequence Information

Coding Sequence: ATGACAGTTTTCATCCACTTGCAGGAACTAAAACCACCAATCGGCGTGTTTCTTGATCCTGAGGAGGTTCCCGGTGAAGAGGTTAACCAGGCAGACGAGGACCCTTTGGCCTGGGACACAGAAACCTTACGTTGCAAAAGCGAGAAGACTGCCGGTGGAGAATACGACACAGCAGGTGACTTCTTAGATTCAAGAAGTCCTGTGCGCAAGGAACATTCAGCAGAGTCGCAGTTCCTGAAGCTAAATATCGCAAAGCATGTAGACGAACAATCCGTCTGTGGTAGGAGTTTGTCAGAAAGTAGGTGTGAAATTCGGGTTGAGCAGAATGAGGACGGTGGCAATGAAAAAAGTTTTAAGAGAGGGCTGATACAGATCCAAAGCGCTGATAGTTCTCATCAGTGTTTTCACTGCCTAAAGTGTTTCACACAGAGGACTCATTTAGTTGATCACATGCAGATCCACAGCGGTAAACGTCCTCACAAATGTTCCGTGTGTCAAAAGAATTTTAGGAAAAGCAGTTCTTTAGTTTACCATATGCGGACCCATAGCGGTGCACGCCCTTATGAATGCTCTGTCTGCGAAAAGAAATTCAAACAAAAAAGTGATTTAGTTAAACACGTGCGGATCCACAGCGGTGAACGTCCTCACAAATGTTCCGTCTGCCAAAAGTGTTTCAGACTGCGGTCTTGTTTGGTTGAGCACCTGCGAATCCACAGCGATGAGCGTGCTCACACATGTTCTGTGTGCCAAAAGAGTTTCACAAGTAAAAGTGTTTTAGTAAAGCACATGCGGATTCACAGCGGGGACCGCTCTCATAAATGTTCCGTTTGCCAAAAGTGTTTCGCCCAGAGGAGTATTTTAGTTAACCACATGCGGATCCACAGCGGGGAACGCCCCTATAAATGTTCCGTCTGCCAAAATAGTTTCAAACAGAGGTCTTGTTTGGTTGTGCACATGCGGATCCACAGCGATGAGCGTCCTCATAAATGTTCCGTCTGTCAAAAGAGTTTTAGACTGAGGACTACTTTAGTTGAGCACCTGCGGGTCCACAGCGGTGAGCACCCTCATAAATGTTCCGTCTGCCAAAAAAGCTTCACTCGGAGAAGTAATTTAATTAAACACGTGCTGAACCACAGGAGTGGGTTCCCTCATCAATGTTCCGTCTGTCAAAAGTGTTTCAGAGAGACCAGTCTTTTAGTTAGACACATGCGGATCCACAGCGGTGAACGCCCTTACAAATGCTCCGTTTGCATAAAGAGTTTCACCGAGAACCATATTCTAGTTAAGCACATGCGGATCCACAGCGGTGAACGCCCATACAAGTGTTCCATCTGCACGAAGAGTTTCGCAGAGAGCGATATTTTAGTTAGGCACCTGCGGATCCACAGCGGTGAGCGTCCTTATAAATGTACTGTCTGCCAAAAGTGTTTCACAGAGAAAGGTCATTTAGTTAGACACATGCGGATCCACAGCGGTGAACGCTCTCATACATGTTCCGTCTGCCAAAAGAGTTTTACAGATAGTGGTCATTTAGTTAGACACATGCGGATCCATAGCGGTAAACGCCCTTACAAATGTTCCGTCTGCCTAAAACGTTTCACAGAGAGCGGTAGTTTAGTGAAGCACCTGCGGATTCACAGTGGTGAACGTTCTTATAAATGTTCTGTCTGCCAAAAGAGTTTCACAGAGAAGGGTCATTTAATGAGACACATGCGGATCCACAGTGTTGAACGCTCTTATGAATGCGCGGACTGCCAGAAGAGGTTCACAAATAAACGCAATTTAGTTACCCACATGCGGATCCACAGTATTGAACGCCCTCAAAATGTTCCGTCTGCTAAAAGAGTTTCACAGAAAGCGATAGTGTAG
Protein Sequence: MTVFIHLQELKPPIGVFLDPEEVPGEEVNQADEDPLAWDTETLRCKSEKTAGGEYDTAGDFLDSRSPVRKEHSAESQFLKLNIAKHVDEQSVCGRSLSESRCEIRVEQNEDGGNEKSFKRGLIQIQSADSSHQCFHCLKCFTQRTHLVDHMQIHSGKRPHKCSVCQKNFRKSSSLVYHMRTHSGARPYECSVCEKKFKQKSDLVKHVRIHSGERPHKCSVCQKCFRLRSCLVEHLRIHSDERAHTCSVCQKSFTSKSVLVKHMRIHSGDRSHKCSVCQKCFAQRSILVNHMRIHSGERPYKCSVCQNSFKQRSCLVVHMRIHSDERPHKCSVCQKSFRLRTTLVEHLRVHSGEHPHKCSVCQKSFTRRSNLIKHVLNHRSGFPHQCSVCQKCFRETSLLVRHMRIHSGERPYKCSVCIKSFTENHILVKHMRIHSGERPYKCSICTKSFAESDILVRHLRIHSGERPYKCTVCQKCFTEKGHLVRHMRIHSGERSHTCSVCQKSFTDSGHLVRHMRIHSGKRPYKCSVCLKRFTESGSLVKHLRIHSGERSYKCSVCQKSFTEKGHLMRHMRIHSVERSYECADCQKRFTNKRNLVTHMRIHSIERPQNVPSAKRVSQKAIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -