GBI_00865-RB


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Gryllus bimaculatus
Gene Symbol
ttk
Assembly
GCA_017312745.1
Location
Scaffold3:23219230-23318640[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.003 0.18 13.0 1.4 2 23 423 444 422 444 0.97
2 25 0.00024 0.014 16.4 2.4 1 23 450 472 450 472 0.99
3 25 2.4e-05 0.0014 19.6 0.8 1 23 478 500 478 500 0.98
4 25 1.8e-06 0.00011 23.1 0.6 1 23 506 528 506 528 0.98
5 25 4.7e-05 0.0027 18.7 3.1 1 23 534 556 534 556 0.99
6 25 2e-05 0.0012 19.8 0.1 1 23 562 584 562 584 0.98
7 25 0.051 3 9.1 0.2 1 14 590 603 590 604 0.91
8 25 0.0059 0.35 12.1 1.7 1 23 1047 1069 1047 1069 0.97
9 25 0.00039 0.023 15.8 0.1 1 23 1075 1097 1075 1097 0.93
10 25 4.5e-06 0.00027 21.9 0.9 1 20 1103 1122 1103 1125 0.95
11 25 0.014 0.81 10.9 2.9 1 23 1131 1153 1131 1153 0.96
12 25 0.00031 0.018 16.1 3.3 1 23 1159 1181 1159 1181 0.96
13 25 1.2e-05 0.00072 20.5 0.4 1 20 1187 1206 1187 1209 0.96
14 25 0.00012 0.0072 17.4 0.2 1 23 1215 1237 1215 1237 0.98
15 25 3.2e-05 0.0019 19.2 1.2 1 23 1243 1265 1243 1265 0.98
16 25 8.7e-05 0.0051 17.8 1.1 1 23 1271 1293 1271 1293 0.99
17 25 0.0012 0.068 14.3 0.6 2 23 1766 1787 1765 1787 0.97
18 25 0.00043 0.025 15.6 0.1 1 23 1793 1815 1793 1815 0.96
19 25 3.4e-06 0.0002 22.2 2.4 1 20 1821 1840 1821 1843 0.95
20 25 0.012 0.72 11.1 2.9 1 23 1849 1871 1849 1871 0.96
21 25 0.0017 0.1 13.8 0.2 2 23 1878 1899 1878 1899 0.97
22 25 3.3e-05 0.0019 19.2 1.3 1 20 1905 1924 1905 1927 0.93
23 25 2.6e-05 0.0015 19.5 1.0 1 23 1933 1955 1933 1955 0.98
24 25 5.9e-06 0.00035 21.5 0.6 1 23 1961 1983 1961 1983 0.98
25 25 0.006 0.35 12.0 1.7 1 23 1989 2011 1989 2011 0.98

Sequence Information

Coding Sequence
ATGGCTGAGACAGTTGTGACTCTGTCTTGGGAAGACCACACCAGTGGACTGGCAACAGAATTTAAAAGTTTATTAGATAATAATTCTTTTGTTGATTGCACTATATCTGCAGAGGGTCAGAGCCTGAAAGCTCACAGACTAGTTTTATCTGCATGCAGTCCTTACTTTCATAAGATTGCTCATGTAGATGGCAACACAGACCTTGTGGATACACATTCTCCTGTGTCCTGTAAAGGAAATGGTGCCTTGCGTAAGCTGAGGCCAAAATCAGTGATAACACCTTCACAAAAACAAGGGAATCCTCAAGGGTTCCTGTATCTTAAAGTTCAACCCTGTTTGTATGCTGGGATTTCGGGAGCAAGAAATCAGTTGCAGGTTAAAAGTAATGAAACCTTGTCAAGTAACTTCATTAGTGGTGGGACTGTGTCTGTTAATGGACAAGTGTTCAAGATCTCAGGAGCAGGCAGAGTCCCGCCGGTGCGACTTCAGGCAACCCAGCGGCGGAGTGCAGTGCGGCTGCAGAGTGGTGGGTCACAGCAGAGCACGATGCTGCAGCTGCACGAGGAGCCAGTCCAGGACGCCGTGGCGCCTACGACGAGGAAATCGGTTTTCATGTGCGTACATCGCGTGGGAAATTTCATCATGGCTGAATCAGTTTTGTCAGTATGTTGGAAGGACCATACCAGCGAACTTGCAACAGTTTACAAAAGTTTATTGGAGAACAATTTTTTGGTTGATTGCACAATATCTGCTGAAGATTACAATGAGACCTCTCATGGGAATACAAGACCATCAGAGTTGCCATCTTCACAGCAGCAGCTTATGCAATTGGGTGATCAAATGTCATCAGGCCAAGATGTTGATGAGGAAAGTGAATCTTCGCTTCCTGTGATTTTGGTGCCAAAAAGTGAACAGCTGACTGATGAAGAGAATGAAGAACCTATGGATTATCCTGATGAGTTTGGAAATGCTATGAATGAAAGGGTTGAAGAAACGGGACCTGCAAGTGCTGAACACAATCTTAACCAACGCTCAAGTGCAGATGCTCTCCCGCCGGTGGATTACCTGGCAACGCCACAGCAGAGTGGAGTGCGGCTGTGGAGTTGTGGAGCGCAGGAGATCACAACGCCACTGCCGCATTCGGAGCTGCAGCTGCCCGAGGGTCAGAGCGAAGAGCAAGTCCTGAGCGCCAAGGGCGGTAAGGCGCTTACGTCGTCCAGTAGCCTTTCCAGTCACAGTCTCACGCATACCAGGGAGCCACAGCTCAGCTGTGACGTTTGCGGAGCTTCTTTCTCCTGCCCCAGTCACCTCATCATTCACAATCGCACGCACACGGGAGAGCGACCGTATCGCTGCGACGTGTGCGGCAGCTGTTTCATTACAGTACAAAACCTCTCCCGACATAAACGAATGCACGCGGGAGAGCGTCCTTATATCTGCGACGTTTGCGGGAAGACCTTCATGGAGAAAAAAGACCTCATCTACCACAGGCGCACACACACGGGAGAGCGACCGTATAGCTGTGACTTGTGTGGAAAGACTTTCATTCAGAACAAGGACCTCACCACTCACTTGCGCGCCCACTCCGGCGAACGCCCTTACCGCTGCGACGTGTGTGGTAGGGCTTTTATCCTCGCTCACCACCTCTCCCGTCACAAACGCACGCACACGGGAGAGCGGCCGTATCCCTGCGACGTGTGCGGTTTTGCATTCGCCAGGTCCAGCACCCTCGCCGATCACAAGCGCATGCACACGGGAGAACGTCCCTTTATCTGTGGTATTTGTGGAAAGAAGTTTAGAAATGCAAGCGGGGCAGTCGGGCCGCCTGAGAACGACTTGGCAACGCCGCTGTGGAGTCGCCAATCCCAGGAGGGCGAGAGGCTCCCGAAGCAGTCGGAGCTTCAGTTGCACGGGCACCCGGGAGAAGCGCCTGGCTCGAGCGAATGCAATTCAAGCATGGCTGAATCAGTTGTGACTGTAAGTTGGGAAGACCACACCAGTGAACTTGTTACAGAATTTAAAAGTTTATTAGAGAACAATACTTTTGTTGATTGCACTATATCTGCCGAAGGTCAGAGCCTCCAAGCTCACAGGCTAGTTTTATCTGCATGCAGTCCTTATTTTCATAGGCTGTTTTGTGAGGAGACTGAAGATCATCCACTTGTCATGCTCTTAGATGAATCATTTCAAAATCTGAAGGCAGTGATCGATTTTATATACTGCGGGGTCACGCAAATTCCAGAAGGCAACTATAGAGCATTTGTGACTCTCGCTAAGTCCCTGGAGGTCAAAGGATTAACAGAGGTTTCTAACAACCTACCTGGCAGTACTACTGATAATGACCCTCAAGATCCATCTGCCAAGAATCAAGTCACTGGAGAAGTTCAAGGAATTAGTGCTAGCCTAAGGGACAGCTGTGAAAATAAAACTGAGAAGATTGCTCACCATTTAGATGGCAACACAGACCGTGTGGACACACATTCTCCTGTTTCCTGTAAAGGAAATAGTGCCTTGGGTGAAGTGAGACTAAAATCAATGATGACACCTTCACAAGAACAAGAGAAACCTCAAGATCCTTCTGTGAAGAATCAAGTCACTGATGAAGTTCCGAGCATTAATGCTAGTAGCCAAAAGGACAGCTCTGAAAATAATTCTCAGAAGATTGCTCACCATTCTGATGGCAACACAGACCTTGTGGATACACATTCTCCTGTTTCCGTTAAGGGAAATAGTGCCTTGCGTAAACTGAGGCCAAAATCAGCGATGAACCCTTCACAAGAACAAGGAACGCCTCAAGGGGTCGTGTATCTTCAAGTTCAACCCTATTTATATGCTCCAATTTTGGGAGCAAAAAATCAGTTGCTGGTTAAAAGCAATGAATCCTTGTCGAACAATTTCACAAGCCAAGTGAGTGGCGGGGCTGCATCTCTTCAAGGACAAGTGTTCCTGATCTCAGGAGCAGGCAGTCTACCGCCGGTGGGACTCCAGGCAGCCCAGCAGCTGAGTGGTGGACCGCAGCAGAACGTGACATTACTGCCGCAGTCGGTACTACAGCTGTGCGAGGAACCAGTCCAGGACGCCGTGGCGCCTACGACGTCTAGTACCCCCGCCGGTCACAAGCGCAAGCAAAAGAAAAAGCACGTTTGCAAAGTTTGCGGAGGTTCTTTCGTTTCGCAATGCGAACTCGACATTCACAATCGCACGCACACAGGCGAACGTCCGTACCTCTGCGACGTGTGCGGTGCTACTTTCGCTAGGCAAAGCCAACTCGCGAGTCACTCGACCATACACACGGGAGAGCGGCCGTATGAATGTGACTTTTGCGGGAAGACATTCCGCCAGAAATCAAACCTAAATTTACACCTGCCCTTACACACGGGAAAGCGCCCGCATCGCTGCGACGTGTGCGGGAAGACGTTCTTGCAGAAGCAAGAATTCACTGAACACAAGAACCTGCACACGGGAGAGCGGCCGCATCGTTGCGACTTATGCGGGATCGCTTTTCGCAGGGCGCATAATCTTAGAATACACAAGTACAGGCACACGGGCGAGTGGCCGTTTCGCTGCGACGTGTGTGGGAAGACGTTCGCCCAGAAAAGCAGGCTCACTCAACACATGCCCGCGCACACTGGCGAACGGCGGTATAACTGCGACGTTTGCGGGAAGTCGTTCGGCTTCCAGCAGAGCCTAGCTATACACCGGCAGATTCACACGGGAGTGCGGCCGCATCGCTGTGACGTTTGCGACAAGACCTTCCGACTGAAAACGTCGCTCGTTGCTCACGTGCGTATCCACACCGGGGAGCGACCGTACAGCTGCGAGTTGTGCGGGGCTCGCTTTCACCAGCAGAGCGGCGTTATGAATCACATGCGCACTCACAACAAAAGATATGATGAGAGTTACAGATTTAAGTCAAAAGACTGGATCTTGTCGTGCAAGCAGTTAATAAGTTTCCAAAATGGCAATTCAAGCATGGCTGAATCAGTTGCGACTGTGAGTTGGATAGACCACACCAGTGAACTTGCTACAGAATTTAAAAGTTTTTTAGACAACAGTTCTTTTGTTGATTGCACTATATCTGCTGAGGGTCAGAGCCTGCAAGCACACAGGCTAGTTTTATCTGCATGCAGTCCTTACTTTCATAAGCTGTTTTGTGAAGAGACTGAAGATCATCCACTTGTCATCCTCTTAGATGAATCATTTCAAAATCTGAAGGCAGTGATTGAATTTATGTACCTTGGGGTAACACAAATTCCAGAAGCCAACTATAGAGCATTTGTGACTCTCGCTAAGTCGTTGGAGGTCAAGGGACTAAGTCAGCTTTCTAGCAACCCACCCGCCAGTACTACTGCCCCTAAAGATCCATCTGTGAAGAATCAAGTCACTGGTGAAGTTAAAGGCAGTAATGCTACCCAAAACGTCAGCTCTGAAAATGAAAAGTCCCTGGAGGGCAAGGGACCAAGTCAGAATAACCCACCTGCCAGAACTACTGTCCCTAAAGATCCATCTGTGAAGAATCAAGTCACTGGTGAGGTTAAAGGCAGTAATGCTACCCAAAAGGTCAGCTCTGAAAATGAAAAGTCCCTGGAGGGAAAGGGGCCGAGTCAGAATAACCCTCCTGCCAGTACTACTGCCCCTAAAGATCCATCTGTGAAGAATCAAGTCACTGGTGAAGTTAAAGGCAGTAATGCTACCCAAAAGGTCAGCTCTGAAAATAAGAATTCTCAGAAGATTGCTCAGCATCTAAATGGCAACACCGACCCTGTGGACACACATTCTCCTGTTTCATTTAAAGGAAATAGTGCATTGTGTGAACTAAGGCCAAAATCGGCGATGAAGAGAAAATCAGTGGACACACATTCTCCTGCTTCCTTTAAGGGAAATAGTGCATTTCGTGAACTGAGGCCAAAATCAGTGAAGAATACAAAGTCTGTGATTTGGCCTTCACAAGGACAAGAAAGTCCTCAAGGGGCCCTGTATCTCCAAGTTCAGCCTGGTTTATATACTGCAATTTCGGGAGCAAGCAATCAGTTGCTGGTTAAAAGTAATGAATCCTTGCCAAAAACTTTCACAAGCCAAATGGGTATTGGGACTGCGCCTAGTCAAGGACAAGTTTTCCTGATCTCAGGAGCAAGCAGTCTCCCGCCGGTGGGACTCCAGGCAACCCAGCAGCTGAGTGGTGCATTACAAAACAACACGACGCTACTGCTACACAAGGGACCAATCCTGAGCACCATGGTGCCTACACCGACCAGTAACCTCGCAGGACACAAGCCCAAGCAAAAGAAAAAGCTCACCTGCAAAGTTTGTGGAGTTTCCTGCAATGCTCAAGCCAATCTCACCATTCACGAACGCACGCACACGGGAGAACGTCCATACCTGTGCGATGTGTGCGGTGCCACGTTCAGTACCTCGGGCATACTCACAAGTCACTTACGCACGCACACGGGAGAGCGCCCTTACGAATGCAACTTTTGTGGTAAGACATTCCGCCAGAAGTCTCACCTCAATTTACACATGCCCTTGCACACAGGAAAGTACCCACACCGCTGCGATGTGTGTGGGAAGACATTCTTGCAGAACAAGGAATTCACTGAACACAAGAACCTGCACACAGGAGAGCGGCCTAATCGTTGCGACATATGCGGGATTGGTTTTCGTTTGGCGCAAAATCTTCGAGTACACAAACTCAGGCACACAGGTGAATGGCCGTTTCACTGCGATGTGTGTGGGAAGACATTCCCAAGGAAAAGCAGACTCACTCAACACATGCCGGTGCATACTGGTGAGCGATCCTATAAATGTGACGTTTGCGGTAAGTCGTTCAGTTTTTCACGGAGCCTAGATCTACACCGGCAAATTCACACTGGAGTGCGGCCGCATCGCTGTGAACTTTGCGGCAAGGCATTCGTACAGAAATCGTCGCTCGTTGCTCACTCGCGAGTACACACTGGGGAGAGACCATTTAGCTGCGATTTGTGCGAGTCTCGCTTCCACCAACGGGGTGGCCTTGCATATCACATGCGCACACACAACAAAAATCGATCCTCTTAG
Protein Sequence
MAETVVTLSWEDHTSGLATEFKSLLDNNSFVDCTISAEGQSLKAHRLVLSACSPYFHKIAHVDGNTDLVDTHSPVSCKGNGALRKLRPKSVITPSQKQGNPQGFLYLKVQPCLYAGISGARNQLQVKSNETLSSNFISGGTVSVNGQVFKISGAGRVPPVRLQATQRRSAVRLQSGGSQQSTMLQLHEEPVQDAVAPTTRKSVFMCVHRVGNFIMAESVLSVCWKDHTSELATVYKSLLENNFLVDCTISAEDYNETSHGNTRPSELPSSQQQLMQLGDQMSSGQDVDEESESSLPVILVPKSEQLTDEENEEPMDYPDEFGNAMNERVEETGPASAEHNLNQRSSADALPPVDYLATPQQSGVRLWSCGAQEITTPLPHSELQLPEGQSEEQVLSAKGGKALTSSSSLSSHSLTHTREPQLSCDVCGASFSCPSHLIIHNRTHTGERPYRCDVCGSCFITVQNLSRHKRMHAGERPYICDVCGKTFMEKKDLIYHRRTHTGERPYSCDLCGKTFIQNKDLTTHLRAHSGERPYRCDVCGRAFILAHHLSRHKRTHTGERPYPCDVCGFAFARSSTLADHKRMHTGERPFICGICGKKFRNASGAVGPPENDLATPLWSRQSQEGERLPKQSELQLHGHPGEAPGSSECNSSMAESVVTVSWEDHTSELVTEFKSLLENNTFVDCTISAEGQSLQAHRLVLSACSPYFHRLFCEETEDHPLVMLLDESFQNLKAVIDFIYCGVTQIPEGNYRAFVTLAKSLEVKGLTEVSNNLPGSTTDNDPQDPSAKNQVTGEVQGISASLRDSCENKTEKIAHHLDGNTDRVDTHSPVSCKGNSALGEVRLKSMMTPSQEQEKPQDPSVKNQVTDEVPSINASSQKDSSENNSQKIAHHSDGNTDLVDTHSPVSVKGNSALRKLRPKSAMNPSQEQGTPQGVVYLQVQPYLYAPILGAKNQLLVKSNESLSNNFTSQVSGGAASLQGQVFLISGAGSLPPVGLQAAQQLSGGPQQNVTLLPQSVLQLCEEPVQDAVAPTTSSTPAGHKRKQKKKHVCKVCGGSFVSQCELDIHNRTHTGERPYLCDVCGATFARQSQLASHSTIHTGERPYECDFCGKTFRQKSNLNLHLPLHTGKRPHRCDVCGKTFLQKQEFTEHKNLHTGERPHRCDLCGIAFRRAHNLRIHKYRHTGEWPFRCDVCGKTFAQKSRLTQHMPAHTGERRYNCDVCGKSFGFQQSLAIHRQIHTGVRPHRCDVCDKTFRLKTSLVAHVRIHTGERPYSCELCGARFHQQSGVMNHMRTHNKRYDESYRFKSKDWILSCKQLISFQNGNSSMAESVATVSWIDHTSELATEFKSFLDNSSFVDCTISAEGQSLQAHRLVLSACSPYFHKLFCEETEDHPLVILLDESFQNLKAVIEFMYLGVTQIPEANYRAFVTLAKSLEVKGLSQLSSNPPASTTAPKDPSVKNQVTGEVKGSNATQNVSSENEKSLEGKGPSQNNPPARTTVPKDPSVKNQVTGEVKGSNATQKVSSENEKSLEGKGPSQNNPPASTTAPKDPSVKNQVTGEVKGSNATQKVSSENKNSQKIAQHLNGNTDPVDTHSPVSFKGNSALCELRPKSAMKRKSVDTHSPASFKGNSAFRELRPKSVKNTKSVIWPSQGQESPQGALYLQVQPGLYTAISGASNQLLVKSNESLPKTFTSQMGIGTAPSQGQVFLISGASSLPPVGLQATQQLSGALQNNTTLLLHKGPILSTMVPTPTSNLAGHKPKQKKKLTCKVCGVSCNAQANLTIHERTHTGERPYLCDVCGATFSTSGILTSHLRTHTGERPYECNFCGKTFRQKSHLNLHMPLHTGKYPHRCDVCGKTFLQNKEFTEHKNLHTGERPNRCDICGIGFRLAQNLRVHKLRHTGEWPFHCDVCGKTFPRKSRLTQHMPVHTGERSYKCDVCGKSFSFSRSLDLHRQIHTGVRPHRCELCGKAFVQKSSLVAHSRVHTGERPFSCDLCESRFHQRGGLAYHMRTHNKNRSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00759338;
90% Identity
iTF_00759338;
80% Identity
iTF_00759338;