Basic Information

Gene Symbol
CSRNP3
Assembly
GCA_017312745.1
Location
Scaffold9:1299493-1318026[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.19 5.5e+03 -2.3 0.2 68 113 109 153 98 160 0.74
2 2 1.6e-104 4.5e-100 334.7 8.4 1 218 462 671 462 671 0.93

Sequence Information

Coding Sequence
ATGAAAAATTTCATTAAAAGGTCACAAAGTACCCGGGTTATGGATGGAAATGGAATTGACAGCTGCCAGTCGACAGAAGATGAAGGAAGTGTTCCGAAAATATGCCCACAATCAAATAATACAACATCTTCCATAAACAAAAAATTGGGTATTAACATCAAAGATAAAACAAATTTCAGTGTGTCTGCTGCGTCAGAAGAACTTTGTAGAACAGATGCATCAGATCGGGTATTAGATGCTTCTGTGTTGTTAATTGAAGAGAAACTCGATAATGTGCCACATATAAGTACTTCAATGCGTACATTCCCTTGTGACAAGGGCAGTGATATGCAGTGTTCTGACTTAAAAAAAGAGTTAAATGAAGAGTCGTTATTATCAAAGACAGAAAACAAATTTTGTGTGCAAAGTCAGGTTATTAAAGGTGACATTGAAAGGAATAGAGATAATTCTTCTTTGTTGTCTGCAGTGGAACTTTCAAGTTTTAAAAGTAGTCCAACTAATGATGCTGATGGTGATGAAGACTCTGCTGTTGGAAGTTCATTAGGTGAAGTGTCAGCCGTATTAGAAAATCATGAAGAAACTTTGTTAGAAACAAATGATCGATCTGATGGTAGTGATTCTGGACTTGGTTCAGATTTGGTAGAGGGTAGTGGTGCTCAAGTTGACTCTTTGTCGACTGGATCTGCTGATGAATCAAATGGTGTTATTAGTACACATGCTGAGAATGAGGAAAGTATTATAAGTGATACAGAAACCTCGTTTTTAGACAGACTTCCTGAGGATTTAGAAATTCAATCCAAAGATATTGAGACACAAAGTTTAGAATTAGAGGTTCCACAGAGTTTGCAGGAAACAATAGTAGAAAAAACCCCTGATATTAATGTGGAAGGGGATGATCATGTTATTCATGAATTGCCAACTTCTAGTTTCAATGTGCAATTGCCTGACGTACCTTCTCCTGATTCATCACCACCACAGATCTGCAGTAAAAATATTTCAAATGCAGGTACATCTGAATACTTTGACATCCCTACTGTAAATAGTGATTCTTCTGTAAGTGAACACGATAAAATGGGACTAAAATTTTCCCTGTCTGCTGAAGCAGACAAAGCTGTAGAAATGGGTTTAAAATTTCCTTTGCCTGATGATGATGATGATGAACCTGATGAGTTGGATTTGAAATTTCCAGTGTCAGTTAATTCGGACAAAACTGTTGATATGGAACTCAAATTTCCTGTATCTGATAATGAAGGCAAGTGTGTGGAAGAACCAGATTTAGGTGCTATATTGGAGTCTGCTGAGAAGACTGCGGCTGAAAGTTCATTGAAGAGAAGCAATCTAAAACGCTGTCATTCATACGATGATTCAGAAGCTCCTGTAGCAAAAAAGAAAAGGTCCATTACATTTGACAAAGTTACTGTCTACTACTTCCCACGTGCTCAAGGCTTCACTTGTGTACCATCTCAGGGTGGTTCAACATTAGGAATGGCATCTACACATGCTCATGTACAGCAATTTTCTTTACTGGAACATGCTGTTGAACAACGCCGTCTTCATCGACAAGTACTTCTACAGTTGCGGAATGAAAGATTGAGTGCACAACGAGCTATGGCATCTTCGAGTGATGATTCAGATAGTGAAGAAGAACAGAGTGATATTTCTGAGTCAGAGTTGGATCTAGATAGTTATTATTTTCTGCAGCCTGTGCCAACCCGACAGCGTAGGGCTTTGTTACGTGCTGCTGGGGTGAGAAAAATTGATTCATTGGAAAAAGATGAATGCAGAGATATTCGATCATCCCGTGAGTTCTGTGGATGTGGATGCAAAGTGTATTGTGATCCAGATACTTGCTCATGCTCACAAGCTGGAATCAAATGCCAGGTTGATCGATTGAACTTCCCTTGTGGTTGTACAAGGGATGGTTGCGCTAACTCCAGTGGCCGAATAGAATTTAACCCAGTGCGTGTCCGCACTCATTTTATACACACATTAATGCGTTTGGAATTGGAGAAGAAACAGAAACTTGAAGTTGAAGATGAAAGTCCTTCAACTAAGCCTCCACAACAAAGTCGAGTCCAGTGGAGCGATGAAAACACTTTGGCAACCGGAAATGTGTATGCGGATATGTCAAAACAGACTTCCTCTGCAAATGAAGGAATGGGAATGCCAAAGTACAGTGGTTCCCTTCTGCGTGATGTGAACCTGGGAGCAGGAACAGAAGTTGAATCTTGTGTACATGCTGGAAATTTTACCAATCTTCATTATAGTACCAGTACAGAGCCACAAGGAATTTCGACAGGTATGGAAATTGGAGTTTCTCCACCACAATGTGTTACTGGTTTTCCTGGCATGGTGGGAGATCTTCCTGCAAGGGAAGACTCCCTTGACCTTTATGCTTTCCGTGATGATGGTTACTCAGAGGATAATAGTAGCGAGTTGGCTGCTGATCGCATGGAGAGCAATCCTGCATCCGATCACTCCCAATTCCTATCGCACCATACATCAGGTCCTCCCTTTCCCCAAAGAAAAGACCCAGCCATAGTTAATGCTGGATTTAATTCAGGATCTGTTTTCCATTTTGACCATCCTTCAACACGACCATTTCCAGGTACGTCGGAAATGCTGGTCAGTCCTGGCTTTGCAGACGCTGGTGCAACTACATATAATTCTCAGACCACTTCGTCCACTCCAAGTATTCTTGATGTGCCATATGATGAGAACACTGCCAAGTATCAGTATTCATCCAGCTTTTCGCAGAATTTTCCTGTTCATCATTCAGCACCTAATACTTTTGGCCATTATAATCCTAACCCCCTGTATGGGGCAGAATATTCTGATAAAACATCAGGGCAGATTGTGGAAAATGGCTATAAAGAAAATTCTGCAGGTGGATCTTCAAATGCTGAATTTAATCAGCATGCTCTTTCACCTGCAAATGGCTCATATCAGAATTTTCAATCTCTTTCTGATTTGCGAGAGAATTATCCAATGCAGGATCGCTCAGCTGTTCCCAATTCTACAGAATCCTGCAATAAGCAAGTGAATGCAAATATAAATCACAGTCATTATACTAATTTGCATACTGTTTGTCCATTAACCAACAAATTGGAATCTTTCTCTGAATTACTCCAGGGACGGTATTCTTACATGACCCCTGGAAGGACAGGTAGCAGCGTTGCTTATGATGATTCGACTGCAGGCATAGCTGGACCATCAGCAACATTTAATAGCAGTGGAGGATCTGCAGATGTTCTAGTGGAAAGTGAATCTGTTGCGGTACAACAGAATGACTCAAGCAATGACTCTGACAAATGTGATCATGGAGCAGCTTCTACCAGTGTTACAGATCCTGTTGTAGAGGACTGTGATGAGAACTTCGGTGAAATCATTAAGAAGACTATGGTGGAAACTGTGTCTGCGTAA
Protein Sequence
MKNFIKRSQSTRVMDGNGIDSCQSTEDEGSVPKICPQSNNTTSSINKKLGINIKDKTNFSVSAASEELCRTDASDRVLDASVLLIEEKLDNVPHISTSMRTFPCDKGSDMQCSDLKKELNEESLLSKTENKFCVQSQVIKGDIERNRDNSSLLSAVELSSFKSSPTNDADGDEDSAVGSSLGEVSAVLENHEETLLETNDRSDGSDSGLGSDLVEGSGAQVDSLSTGSADESNGVISTHAENEESIISDTETSFLDRLPEDLEIQSKDIETQSLELEVPQSLQETIVEKTPDINVEGDDHVIHELPTSSFNVQLPDVPSPDSSPPQICSKNISNAGTSEYFDIPTVNSDSSVSEHDKMGLKFSLSAEADKAVEMGLKFPLPDDDDDEPDELDLKFPVSVNSDKTVDMELKFPVSDNEGKCVEEPDLGAILESAEKTAAESSLKRSNLKRCHSYDDSEAPVAKKKRSITFDKVTVYYFPRAQGFTCVPSQGGSTLGMASTHAHVQQFSLLEHAVEQRRLHRQVLLQLRNERLSAQRAMASSSDDSDSEEEQSDISESELDLDSYYFLQPVPTRQRRALLRAAGVRKIDSLEKDECRDIRSSREFCGCGCKVYCDPDTCSCSQAGIKCQVDRLNFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQKLEVEDESPSTKPPQQSRVQWSDENTLATGNVYADMSKQTSSANEGMGMPKYSGSLLRDVNLGAGTEVESCVHAGNFTNLHYSTSTEPQGISTGMEIGVSPPQCVTGFPGMVGDLPAREDSLDLYAFRDDGYSEDNSSELAADRMESNPASDHSQFLSHHTSGPPFPQRKDPAIVNAGFNSGSVFHFDHPSTRPFPGTSEMLVSPGFADAGATTYNSQTTSSTPSILDVPYDENTAKYQYSSSFSQNFPVHHSAPNTFGHYNPNPLYGAEYSDKTSGQIVENGYKENSAGGSSNAEFNQHALSPANGSYQNFQSLSDLRENYPMQDRSAVPNSTESCNKQVNANINHSHYTNLHTVCPLTNKLESFSELLQGRYSYMTPGRTGSSVAYDDSTAGIAGPSATFNSSGGSADVLVESESVAVQQNDSSNDSDKCDHGAASTSVTDPVVEDCDENFGEIIKKTMVETVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-