Basic Information

Gene Symbol
mysm1
Assembly
GCA_017312745.1
Location
Scaffold125:1378441-1427395[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-09 1.3e-06 29.1 0.1 3 41 111 149 109 152 0.97

Sequence Information

Coding Sequence
ATGACTTGGGCCATCATGGCGGAAGAGGAAGACGAGATTGATATTTTGGGTGATTCAGATTATAATCTAGATAATCTTCTGACAAAGGACGACGGTCGCTTGGGGTCGTGTTATGTAAGTGGTGTGCTTGGGCGTCAAGGAGCGGAGCTTTTGAATTGCGACTACAATATCGGCTCCCACTGGTTATTAGATGCACCAAATCAATCGTGTTGGTATGCTACAGCAGATGAAGCAAAGTCTTATGATCGCAATCAGTTTAGTTTTCCGAGCTCGCTTGCCAGTGGCGTCTCGGATTCTCTTCCTTCAACATCTCAATGGGATGACAATGACAGTTGGACAGACAAAGAAAAATCATTGCTGGAGCAGGGTTTGGAAATTTTTGGACATAGTTGGACACAACTGGCTCAGTTTATTGGAACAAAAACTACCCATCAGGTGAAGAACTATGTAACTTCGCAAAACATACATTTTGGTCAGACTGCTGAAAACTTTAATTTCGATTCTTCAAATCATGGTAATTCAGAAGTGTTCAATTTCTCAGAATTAATAGATGATATGCAAATACCTGCATCAATGGAAGAGGTACGAATAAAGAAAGAAAGCAGTCTTGATTCTGATGATGATGCTGAAATAGAAGTGGAAGATAAAGATTTCTCTGCTAGTGAAATAATTACTACAAGTAATAAAGAGGAATCTGTAATTAAATATCAAGAGGAGGTGAAAATATGTCCTAGAACAGAAAAAATTGTGGAAGTAAAATTGGAGCGACAAAAGCCAAGGAATTATCTAGATTTCTTCGAAAACGTCGTCGAAATTGGGAAACAGAAGAGTTCGACACAACAGTCGTCAGATGTTTCCGAGGCGGATAACGAGGAAGTCGACGGAAAAGAGGTTTTATCTGCGTCCGCGGTGGCTAGCGAATTGTTAAAATCGATTCGCGACGGCAACGTCGGTCCTGGAAGACACGTGAGCTATGGATTGGACATGGTTGGAGAACCAGGTGGAATCCAACCCTCGTGGACACCGCGAAGAACTTGGGCTCCTAATGCAGTTAGGGAACAAGCACATGAGTGTGAACAATTTGATGTTAATGTCAGTGGAAGAGAAACAAAAGAATGTGATGGTACTAATCTAGAGGAGGCAGCCAGGTCTGGTCACTCTCATCATGAAGTTCTTGAATTGATATTCAGTATGCCACCACCAAGAGAAGAAGTTTTTCTCGACACTGAGGTGATAAGTGATGATGAACGAATGATACATATGGAGTTTTTTGAAGGGCGATCTGCCAAAACACCTAAACGTTACTTGAAAATTCGTAATCATATATTGGAATGCTGGCGGCAAAGTCGTCCAGCATACATAACTAAAACGTCTGTGCGAACTGGTTTGAAACATTGTGGTGATGTCAATTGTATTGGGCGTATACATGCATATCTGGAACAAATAGGAGCTATTAATTTTGGCTGTGAACAAGCACGGTACTTAAATGCTGCTGCTCAGAGTATACCAATTGTTCCTACACACAAGAAAATTAGTAAAGATGAACTAGCTGCTATGCAGCAGGCTCGGATTGGTGCAATGAGACCTCGTAAGAAGAAAAAGAATCCTGCATTTACTCTTGATGGAGATGGAGGCTACACCATTACACACAGTGAAAGTGGGGAAGCTATTCACACAACTGTTGTTCAAGATACTGTGTCAAAAGGAAATAAAGGACAGTCTACTAAAACGAAAACTATCAAACTTATCTATTGCCAAAAATATTCAGACTCCAAGCCTGCTCCATTTATTGTTCACATGAATGTGGAGGCTCTTTTGGTGGTCGACATGCATGCTCACTCTTCTCATACTGAGGTGGCGGGATTACTTGGAGGCACATTTGATGTAGCTAATAGTGTGCTATACATCAAGAGGGCTTTGCCATGTCGCAGCAACAGTAGTGGTGTTCACTGTGATATGTGCCCAGTTTCCCAGACGGAAGCAAGTGAAAAGTTGCAAGGAGCTAATTTAGAAGTGGTAGGGTGGTATCATTCACACCCCACATTTCTCCCTAACCCCTCTCTTCAGGATTTGAGTACACAAAGCAACATCCAACAGTGGTTTTCTCAGACAGCGGCTTCACCTATTGTTAGTTTTATATTGGCACCATATTGCCCTATTAATCCAACTCTAGCATCTCAGTTCAGATGTCTCACAGTTCATTCTGATGAGATAGAGACGACACCATATGGAACTCCTTACATGTTTTCAGTAACAGTGACATCACATGGACTGAATGTGGCAAATATGTTAAAAGATATGGCAGCCATATTTTCTCTTGTAGAGGAAAATCAGCAAGTTGCTGTCGATTTTAATTCTGAATTTCAAATGAGTCCTTCTATTTCATTCAAACAAAAGTGTGTTGAAAGTGCCAAACTACACTTGGCATCATGCAAACCCAGTATCCCTCATGCTCTTCAAAACAGTGTTGTGCAAGGCATTATGCAAGCTTGTGGTACTCTTGCTTTAGCAAGAGGAGATTGTCACAGCAGGAGCACTAGTTAA
Protein Sequence
MTWAIMAEEEDEIDILGDSDYNLDNLLTKDDGRLGSCYVSGVLGRQGAELLNCDYNIGSHWLLDAPNQSCWYATADEAKSYDRNQFSFPSSLASGVSDSLPSTSQWDDNDSWTDKEKSLLEQGLEIFGHSWTQLAQFIGTKTTHQVKNYVTSQNIHFGQTAENFNFDSSNHGNSEVFNFSELIDDMQIPASMEEVRIKKESSLDSDDDAEIEVEDKDFSASEIITTSNKEESVIKYQEEVKICPRTEKIVEVKLERQKPRNYLDFFENVVEIGKQKSSTQQSSDVSEADNEEVDGKEVLSASAVASELLKSIRDGNVGPGRHVSYGLDMVGEPGGIQPSWTPRRTWAPNAVREQAHECEQFDVNVSGRETKECDGTNLEEAARSGHSHHEVLELIFSMPPPREEVFLDTEVISDDERMIHMEFFEGRSAKTPKRYLKIRNHILECWRQSRPAYITKTSVRTGLKHCGDVNCIGRIHAYLEQIGAINFGCEQARYLNAAAQSIPIVPTHKKISKDELAAMQQARIGAMRPRKKKKNPAFTLDGDGGYTITHSESGEAIHTTVVQDTVSKGNKGQSTKTKTIKLIYCQKYSDSKPAPFIVHMNVEALLVVDMHAHSSHTEVAGLLGGTFDVANSVLYIKRALPCRSNSSGVHCDMCPVSQTEASEKLQGANLEVVGWYHSHPTFLPNPSLQDLSTQSNIQQWFSQTAASPIVSFILAPYCPINPTLASQFRCLTVHSDEIETTPYGTPYMFSVTVTSHGLNVANMLKDMAAIFSLVEENQQVAVDFNSEFQMSPSISFKQKCVESAKLHLASCKPSIPHALQNSVVQGIMQACGTLALARGDCHSRSTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-