Basic Information

Gene Symbol
ncor1
Assembly
GCA_017312745.1
Location
Scaffold180:2466904-2560397[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.4e-05 0.022 15.5 0.0 3 43 473 513 472 515 0.97
2 2 5.1e-14 4.7e-11 43.3 0.7 3 46 941 985 941 985 0.98

Sequence Information

Coding Sequence
ATGTACTTCCGGTATAATACGGAATACGTGTTGCCTGGCGATGGTGTCCCAGCTGGATGGCAGGTGGAGAGGCAGCCTGCGCAGCCTCCTCAAACTTCTGCTGCTCCTCCATCTGTGGTGCAAGCACAACCTCCTCCCTCGTCCCAAGCCCCTTCTGCCTCTGGCCCTGTGCCACCTACCCAACAACCGCAGTCACAAGCACCCCCGCAGCCTCAACCCCCATCCTCACAGCCCCAACCCCCAGGTCCTCCACCCCAGCAGCAGCCCCAGCCGCAATCCCAACAGCCACCTGTTCCCTCTGCGACACAGGGACCATCTGCATCTTTGGACCTCCTGCGTGAAGGCCCTCCTAGGCAGAGGATATCTCTGCTATCACAGGACGCATGGAGTCCCATGGCACGCAGCCGTTTTGCCCAGGCAGAGCCATATAGGGAACCAATGGGCTCGACTCTGGTGTCAGGAGGCAACACTGCTGTGCAATTGGACCCTGGTGGCCAACCCTTCAAAAAGATCAAGCTGGTGGGAGAGGTGAAACCTGAAGTTCAGCAACCTCTACGGGTGGACACTAGGGGGCAGCCAGGAGCATACACTCCACAGGTCGAAGCTATTTCTCCTACCTTGCCCTCTGATTCAATGCAAGAAGATGCTGCATTTCGTACCACCAAGGATGATCTTCTACAGCAAATAGCTAAAGTTGATCGTGAGATTGCCAAAGCGGAGTCTCAGATTTCTAAGCTGAAAAAGAAGCAGCAAGAATTGGAGGAGGCAGCAAGTAAACCAGCTATTAAGAAAGAGGAGGAGGAAACATCTCAGCCAAAGCACCAGAGTCCTGCACAGAAAATTTATGCAGAAAACAGGAAGAAAGCTCAGGCTGCCCATGCCATGTTGGAAAAGTTAGGGCCAAAAGTGGAACTTCCCCTGTATAACCAGCCGTCTGATACTGTGGTATATCATGAGAACAAAAGAAGGTACCTGACATTCAAGAGCCGTCTCATGGAGTATTTCAAGAGGAAGCATGCAGAACGTGAGAGTCGAGAAAAGTACCTGACTTCTACCTATTCCCGCCTCATGCAGGAATGGTTGAGGAAAGTGGAGAAAATGGAAGCATTAAATCGACGGAAGTTCCGGGAGACAAGAAATCGTGAATTTTTTGAGAAAGTCTTTCCTGAGCTGCGGAAACAACGTGAAGATCGTGAGCGATTCAGTCGTGTTGGTGCTCGTGTGAAGAGTGAGGCAGATCTAGAAGAAATAATGGATGGCCTGCAAGAACAAGAGATGGAGGACAAGAAAATGCGTTCTTATGCTGTTGTTCCACCTATTTTGTTGGATCCTAGACAACGAAGGATTACATATGCCAACAACAATGGTCGAATTGAGGACTTTGAAGCAGAGTACAAAGAACGGCAGCTGCTGAATGTGTGGACTCCAGCAGAAAAAGAAGTATTTAAAGAGAAATACCTTCAACACCCTAAAAACTTTGGAGTAATAGGTTCTTATTTAGATCGCAAAAGTGTGTGTGATTGTGTGCAGTACTATTATCTAAGTAAGAAGACTGAAAACTATAAACAGTTATTGCGCAAATCACGTCAGCGTACACGTTCTTCTCGTAATAATCCTCACGGCAAACCATCAGGTGCTTCGCAAAATAATCTACCAGAGATTTTGAGTTCAGGTGTTACAACTAGGCTGCAGCGTGAGCAGCAACAGAAACAGGAGCAACCGAACAATAGTGTTGCGAATGTGACTTCATCAGCATCTAGCAGCCTAACGACAACTGCCTCTAGTTCAAGTTCAAACACTAGTTGTGTGACATCGAGCACAACAACAGCTACATCAGTTTCTTCAGTCACCACCGTCACCTCGTCAACATCATCGAATTCTAGTGAAGTGAATCAGGTTGTTGCGTCATCAGCTACAAGTACTTCGACAACTACGACAACTACAGTGACCACTGCCACTACAACTACAACGCCTTCCACAACGTCAACATTTGTTACAATTACAACATCAACTGTGTCTTCAGTACCTTCACCAGCTCCTTCTACGTCATTGCCATGCTCGTCAACCTCTGCTTCCACTTACGTATCCAGTAATGTATCCAGTAATGTATCCAGTGGTGTGCTAACAAGTGGAAACAATACTGTCACTGTGGCGATTGGCACACCTATTACCAGCACAACATCTAGCAACACTAATAATAGTATTCTGAGTAATGACAATGATGGGACAGAGAACAAAGAAAACAACAAGTCACCTAGTGAAATGAAGTTTGAGAGCAAAAAGAAAGAAAGAAGAAAAGACAAGAAGAAAGAGGAAGTCGAAACTAGCGACGAGGAGATGGTCAATGCACAAGACGCGAGCGGTGGCGGTGGAGGCGGCGGCGCAGCGGGGGCGGGCGCGGGCGGAGGAGGCGCGCACCCGTGCGCCGTGTGCCAGGCGCTGCTGGAGCAGTTCCTTCAGTCGCGACCACTGCTGCGCGCGCACGCCGCTCAGTACGGTTTGCGCGAGGACCAGGTGCCCGCGGGCGCGCGCGTGTGCAACACATGTCGCTGCAAGGCGGTGCGCTCGCGGTACACGCAGTGCCCGCTGCCAGCTTGTCCCAACGGCAAGGGCCGTGTCAAGCGGCTGCGCTCGCTGCCCGCGCGCTGGGCGGAGCTGCCCGCCGAAGTGCGAGACCCCATCCAGAGAGAGTTCCAAATTCCACCAGGAGTGAACAAATGTTGTTCAGTGTGTTTCAATCGAATTTCAAGACAGCTGGCTCCGCATGTCCCAGATGGTTTGTGTGATGAGGTGGATGGCAACAGTGGTGCAAACCAGATTCGATGGACAGATGAAGAAATAGAGGCACTTAAACGTGCACTGTGTGAACATGGAACCAACTGGATCAAAGTGGCTGAGAGAGTTGGCTCATCACGTTCGCACCACCAGTGCAAGAATTACTATTTCAATTACCGCAAAAAGCTGGGTCTTGACTTGCTTGTGCAAGAATATAAGAAAACCCACCTTGGAGAGGAAAGAAAACCTACTGTCACAGATGAGGAAGAATCTGGTTCCAGTACTTCTTCATGTGATGAAAGACTCCCGCTGGACAACAGTGACACTGATAGTGCCCCTTCACCATCCTCCTCAGCTATCCATGACACATCAGAAAAACCTATGGCCTCCTCCTCAGAGGGAAGTGTAGTAAAGTTACCTGATCATGAGCCAGCTGCTGTTGTCAATGGTACAGGTGTCTGTGTCGCAATGCCACCATCAGGTTCTGATTCTCGACCCCAAGGACAGCAAGCTGATTATGATAGCTCTGCTACAGAAACAGCTGATGAAGGTCAAGGGGGTGCTGATGGTGATACTTCAGTGGCTTCACGCCAGTCTCCTGGCAAGAACTCCCTCTATCCCCCTGCAACCTGTACTATAGCCACTCCAATCAGTCAAGCCCAATCTGTGGAGTTAAATGGTCCTGTTGGAACTTCCTTAAGAGAAACAGCCTCTCCGTCCAATGTTCGTTCTGTGAAGGATCTCATGTTGGGTGTCATTGAGATGAGTCTCAAAAAGACTCCAGGAGGTGGCACCTCATCTGTAGTTGAGAACCCTTCTGTGGCTCCGACTATAAAATCCATTTTAAAATCAAATAGTCAATCAGATGTGGGTTATGTCCCTCGAGACTTTCGGCCAGATACAAAGCGGCAGTCATTATCTGTGACTCAGGACACAAGTGGTTTGGCAACTTTGTCAGTTGTCAATTCACATGCTAGTCCTAGCAGTCAGCACCATCACCTTCAGCCACCTCCATTACCACATGTACCACAGATGCAAGCCACTATAACACCGTGTCCTGTTCCTCCACCTGAATTGCCAAAGGAAGGACTTGTGGTTGTACAGGTGCAGCAGGCAATGAGAGAGAACCGTGAGCCTGAGCCTGAAACCCTTGACTTATCTATCAAGAAGCCACGTGAATGCAGCCCAGCTCCGAGCCCAGCACATATTACGCATGGACACTCTGCACGTGATTCACCTTCTGGTCTTGGAGTCTCTCCCCATACCACTTTGCACACCGTCCCACCTCCCGCCCATTCAAAAGTCCACCATTCACATGCTGGGCACCAACCGCCAGTGCCTCCTGCCACTCTGACGGCAGTCTATCGAACAGAGTCAGGACCTGCGAATTATTATTCTCAGCAGGTTGTAGTGTCTTCGGAACAGTTGCGCCCTGTATCTAAAGGACCTGTGTATCTACAGCAGCATACAGATAATCGTAGTGGTCCAACTGGTCCTACTCCCCACCTTGTTCTAAATCAGCAAACATCAGTGACAAGAACACAGCCTTCAATGCAACCTGCGAAAGTGACGAAGGTCCCTGCACCCCCAATGCCATCATCAAAACTGTCTCCAAAGCTTCCACCAGTGGGGAGTAAAGCTGGTTCCATCACTCATGGTACACCAGTCTCCACCACACCAATGGTGATTGGTGGGAATATTCATCAGCAGCCGCAGGTGCGCATCGATGGACTGCTGCGCCAGATGACCCCTCCCACACAACCTTCTAAGGAGCTTACTGCGGGATCCATAACTCAGGGAACACCTGTACATGCTTCCCCTCATCATCTGGGTGCTGACAAACGGTCTGATCGCTCTGGATCCCTCACTCCATCTAGTTACAACTATTATAAGAGAGTGTCTCCAGCTTCTGGCCAAAACACCAATAGTTCAAATCCAAGCCCCGCTCCTTCAGGGTACAGTGTTTATTCTCATGAAAGCTCTCTGCCACAAACCTCTACCCCCAGTGGATTTAGTTATACCCATCCAGTGTCCAGAGGGGCACCAACATTGGATGCACAGATCCGGAGAGAGATAATCATTAATGACTACATAACATCACAACAAATGCAGGGTTTGAGGAGAGGGTCTGGTTCCACTTCCTCATCTGAGAAAGGAAGCTCTCAGCAAGATGCTCCTTCACCACGAGCAGTGTCTTCTTCCCCACATTATTACCCTTCAAATGCAAGTCAGTCTTCATATTTAGCTGCTGATTCTCGGTTGTCAAGACCACCTTCTAATAACCCTGCCACTGAACAACCTCCCACCCCACCTCACCATACCCCAACCCCTCCAACGAGGCAAGGGGTTATCCAACGACACAATACTGCTGTTCCTCAGGTATCTCAATCTCGCCCACCTAGTAGTGGTAGTATAAATTCGGGCAGCTCAGCAGGCAAGCCTCCATCACCTGCACCATCTCCACATCAGCGTTTGCACCACATTCCATCTCATGCACACCACTACCACCAGCCTCCTCCTGGTCACGAAGCTTTCTCTTCTCTAGTAGATGTTGCAGTCCAACAACCCAGTCTACCAGTACCTGCTGACAAACGACAGCCTCCTCCATCATCCCAGAGATATCCTTCTCATCCTTCACATGCCCATGAGGGTCTTGGCAAGACAATTATGGACTCAATGAGTCCAAGAGTTTTGGCAGAGCATCATGAACAGGAGAGGTATGCTCGTGAGAGGGATGCTCAAGCACATCATCAAGCTGAGCAGCATCGATATTTAAGTCTCAGAGATCGTGACGACCAGAGGTTTGCGTCACCAAGTCCGGCTCGAGATCCTCATCAGGAAATGAGGCAGGACCGGTATGGTCAAGTAATGCGAGATGAGAGGGAGAGGCTTGTACATATTCAACAACAGCAGCAGCAGCAACAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACACCAGCAGCAGCAGCATCAATTACAACAGCAACAGTTGCACCAACACCAGCAACAACAGTCGCATCAACAGCATCAGCAGCATCATCATCATCAGCAGCAACAACAGCAACACCAGCAACAACAAATGTTGCGGCAAGTGAGAATGGCACCAGAGTTTGATCATCGACAAGCATCTAATCGCCTGCACCCCAGTTCTGCCTATTCCCGTGAACATAATCGTGCTGCTGACATGGAACGGCCCTCAGAAGGAACTCGTATGGTTATTGGAAGTTTTTCACGGGAATTAGGTCCAGGGCGTCATCATCCAACAACCATGCAGCAGCAACAGCAGCAGCAACAACAGCAACAACACCAGCAACACCAACAGCAGCAACACCAGCAGCAGCAGCAGCAACACCAGCAGCAGCAGCAACACCAGCAGCAGCAGCAGCAGCAACACCAGCAGCAGCAGCAGCAACAGCAACAGCACCAGCAGCAGCACCAGCACCAGCAGCAACAGCAACACCAGCAGCAACAGCAACAACAACAACAACAACAACAACAGCAGCAGCAACAACAACAGTTGCAGCAACAAACTCAACAGCATCAGCAAAGTCATGTTATTGACACTTCTCGGGAAAGGGAGGGAAGAGGTCCTCCAACAACAGGTGGTCGCCCCCAAACTGGAGATTCTCTCACAATGACAACAGCAAGTCTAATTGATGCTCTGGTGACTCATTCCATCAATCAGTGTTCAGAACCAGGGAGTAATGGTTTAGGAGGTGGAGGATCCCAAGTCCCAACTCGGCCTGGCGACAGACTTTTCCAGGGATTTCATCAGCCTCCTTCTTCACAGTCTCAATCGCAGGCACAGTCACAATCACAAACACAATCTCAACCCCAGTCTCAGTCTCAGCCACCTTCTCAACCAATGCTTGTTGTATCGGAAGCAAATGGGAAGACATCACCTATGAAAGGGACTCATAGTCCCACAGTGCATTTGGAGCATGGCAAAGCATCCTCACAGCCACAAGAAAATCAAGTGACTGGAAATTCCAAAACTACATTCACTCTTGGGGAGCATATTCATTCTACTATCAATAAAGAATATGGGAGCAGTGCTGCTGGATCCACGGGCAGTACTTATGTGCAGATGCCAACACACCACAGAAATGTATACCCACATGTGCCATATGTTCATATGGCACCTCCTCCTGTGTCTTCACCAGCAGATGATCCTCGCCTCCGCCACGCTCTTCAACAACAGGAGAGAGAGAGGGAACGCGAAAGGGAGCGGGAAAGGGATAAATCTCGTGCAGGCACTCCCTTACAGTCTGATGAAAGGCAAATCATAAGGATAGCTCAGCCAGCTTCCCCGCGAGGAGGTAATCCTCAGCAGGGATCAAAGGGTTCTTCAGGCCCGGGATATCATGTGGAGCCAGTATCCCCTCCTGAAGCAGGCCCTGGGAACCATCTGTGGTTGCCTCCTGGTAGCAGTTCAGGAGGAATGCTTGGTACACCTGTGACAGCGCCTTCTGACCTGGCATTTCTTGGCCTGACTAGAAGAGCAAGTGCACTCTCTGCATTAGATTATGTTAATAATAAAATTGTTGAGGTTATGAGAACTTCGGAAGATGAAAAACCCGCTTTTCCAGGCAACATGCCCCAACAAAGGCACCATCAATCTTCAGCTCAACATTATTCAGTAGGGAAACCTCGGGAAGTACCTAGCAGCTTTGAAGATAAACAGTCATATTCTTCCGATCATGGTGATCCTCAGCAGGGTTCTGAGGATGGGAATGTGCGGTTAAGGACTGGAGATAGTGAAAATTCAGTGAAAGACAAAGAGCGAGCGTGTGATAGTCCTGGTGAGATGGTGATCGATGAAAGTGCGCAGTCCCAGGGGCAGCAGAGTGGAGATAGTGGTGGAACTGCAGGTCCAGGGAAGCTGGAGCCTTCTGCTGTGACCAGCAAGGTGCCTTCCCCTAACGTTAACACTGTTTCAGTTGCCAGTAACTTGGACGTTGTGGGTGGGCGTGTGGGGGGTTCAGGATTTCCTCATGCATCGTCTCCAGCCTCTAAGACAATGGTCCTGCCACCTGCAGCTGAATTTGTGCCCACTTCTACTACATTCTCATACCCCTTCTCAGCCCTGAATGTTTTGCATTCTCCAAACCCCAGTGGACAGCCTTCAACTGGTCAACCTCCTGTGAGTCAGTCAGTCAGCCAGAGTGGTGGGTCATCTGCAGGCAAAAACCCACAGTTGTCTGTCTCCCAGGGCTCGGCTGCTACAAGCTCTCCTGCAGATATTTCATCTCGATCATCTGAACCTGTACCTTTACTGTCAGACCAATATGAACCATTATCTGATGAGGACTGA
Protein Sequence
MYFRYNTEYVLPGDGVPAGWQVERQPAQPPQTSAAPPSVVQAQPPPSSQAPSASGPVPPTQQPQSQAPPQPQPPSSQPQPPGPPPQQQPQPQSQQPPVPSATQGPSASLDLLREGPPRQRISLLSQDAWSPMARSRFAQAEPYREPMGSTLVSGGNTAVQLDPGGQPFKKIKLVGEVKPEVQQPLRVDTRGQPGAYTPQVEAISPTLPSDSMQEDAAFRTTKDDLLQQIAKVDREIAKAESQISKLKKKQQELEEAASKPAIKKEEEETSQPKHQSPAQKIYAENRKKAQAAHAMLEKLGPKVELPLYNQPSDTVVYHENKRRYLTFKSRLMEYFKRKHAERESREKYLTSTYSRLMQEWLRKVEKMEALNRRKFRETRNREFFEKVFPELRKQREDRERFSRVGARVKSEADLEEIMDGLQEQEMEDKKMRSYAVVPPILLDPRQRRITYANNNGRIEDFEAEYKERQLLNVWTPAEKEVFKEKYLQHPKNFGVIGSYLDRKSVCDCVQYYYLSKKTENYKQLLRKSRQRTRSSRNNPHGKPSGASQNNLPEILSSGVTTRLQREQQQKQEQPNNSVANVTSSASSSLTTTASSSSSNTSCVTSSTTTATSVSSVTTVTSSTSSNSSEVNQVVASSATSTSTTTTTTVTTATTTTTPSTTSTFVTITTSTVSSVPSPAPSTSLPCSSTSASTYVSSNVSSNVSSGVLTSGNNTVTVAIGTPITSTTSSNTNNSILSNDNDGTENKENNKSPSEMKFESKKKERRKDKKKEEVETSDEEMVNAQDASGGGGGGGAAGAGAGGGGAHPCAVCQALLEQFLQSRPLLRAHAAQYGLREDQVPAGARVCNTCRCKAVRSRYTQCPLPACPNGKGRVKRLRSLPARWAELPAEVRDPIQREFQIPPGVNKCCSVCFNRISRQLAPHVPDGLCDEVDGNSGANQIRWTDEEIEALKRALCEHGTNWIKVAERVGSSRSHHQCKNYYFNYRKKLGLDLLVQEYKKTHLGEERKPTVTDEEESGSSTSSCDERLPLDNSDTDSAPSPSSSAIHDTSEKPMASSSEGSVVKLPDHEPAAVVNGTGVCVAMPPSGSDSRPQGQQADYDSSATETADEGQGGADGDTSVASRQSPGKNSLYPPATCTIATPISQAQSVELNGPVGTSLRETASPSNVRSVKDLMLGVIEMSLKKTPGGGTSSVVENPSVAPTIKSILKSNSQSDVGYVPRDFRPDTKRQSLSVTQDTSGLATLSVVNSHASPSSQHHHLQPPPLPHVPQMQATITPCPVPPPELPKEGLVVVQVQQAMRENREPEPETLDLSIKKPRECSPAPSPAHITHGHSARDSPSGLGVSPHTTLHTVPPPAHSKVHHSHAGHQPPVPPATLTAVYRTESGPANYYSQQVVVSSEQLRPVSKGPVYLQQHTDNRSGPTGPTPHLVLNQQTSVTRTQPSMQPAKVTKVPAPPMPSSKLSPKLPPVGSKAGSITHGTPVSTTPMVIGGNIHQQPQVRIDGLLRQMTPPTQPSKELTAGSITQGTPVHASPHHLGADKRSDRSGSLTPSSYNYYKRVSPASGQNTNSSNPSPAPSGYSVYSHESSLPQTSTPSGFSYTHPVSRGAPTLDAQIRREIIINDYITSQQMQGLRRGSGSTSSSEKGSSQQDAPSPRAVSSSPHYYPSNASQSSYLAADSRLSRPPSNNPATEQPPTPPHHTPTPPTRQGVIQRHNTAVPQVSQSRPPSSGSINSGSSAGKPPSPAPSPHQRLHHIPSHAHHYHQPPPGHEAFSSLVDVAVQQPSLPVPADKRQPPPSSQRYPSHPSHAHEGLGKTIMDSMSPRVLAEHHEQERYARERDAQAHHQAEQHRYLSLRDRDDQRFASPSPARDPHQEMRQDRYGQVMRDERERLVHIQQQQQQQQQQQQQQQQQQQHQQQQHQLQQQQLHQHQQQQSHQQHQQHHHHQQQQQQHQQQQMLRQVRMAPEFDHRQASNRLHPSSAYSREHNRAADMERPSEGTRMVIGSFSRELGPGRHHPTTMQQQQQQQQQQQHQQHQQQQHQQQQQQHQQQQQHQQQQQQQHQQQQQQQQQHQQQHQHQQQQQHQQQQQQQQQQQQQQQQQQQLQQQTQQHQQSHVIDTSREREGRGPPTTGGRPQTGDSLTMTTASLIDALVTHSINQCSEPGSNGLGGGGSQVPTRPGDRLFQGFHQPPSSQSQSQAQSQSQTQSQPQSQSQPPSQPMLVVSEANGKTSPMKGTHSPTVHLEHGKASSQPQENQVTGNSKTTFTLGEHIHSTINKEYGSSAAGSTGSTYVQMPTHHRNVYPHVPYVHMAPPPVSSPADDPRLRHALQQQERERERERERERDKSRAGTPLQSDERQIIRIAQPASPRGGNPQQGSKGSSGPGYHVEPVSPPEAGPGNHLWLPPGSSSGGMLGTPVTAPSDLAFLGLTRRASALSALDYVNNKIVEVMRTSEDEKPAFPGNMPQQRHHQSSAQHYSVGKPREVPSSFEDKQSYSSDHGDPQQGSEDGNVRLRTGDSENSVKDKERACDSPGEMVIDESAQSQGQQSGDSGGTAGPGKLEPSAVTSKVPSPNVNTVSVASNLDVVGGRVGGSGFPHASSPASKTMVLPPAAEFVPTSTTFSYPFSALNVLHSPNPSGQPSTGQPPVSQSVSQSGGSSAGKNPQLSVSQGSAATSSPADISSRSSEPVPLLSDQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-