GBI_06042-RB
Basic Information
- Insect
- Gryllus bimaculatus
- Gene Symbol
- -
- Assembly
- GCA_017312745.1
- Location
- Scaffold31:9678866-9688262[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.068 92 3.5 0.0 22 38 80 96 77 98 0.87 2 2 3.2e-11 4.3e-08 33.4 0.0 3 35 185 218 183 223 0.91
Sequence Information
- Coding Sequence
- ATGCACCTTCATATCGCTGTGGCGGAGTGGAAAAGACCCTTCCACAATGCACATAGTGGGCGAGCGCGCGCGGGCGCCCTCCCCGCCCTTGAGAACCTCCGGCTGACGGCTCCCTTCTCTGTTGCAGGCCAAACTGCTGGAAAGCTCGCATGCTTGGCTTGGCGCTTCTACCTCGTCTATCGCGGggcgacctgctggccgcgatcgctctggtgcatcgcggcacccatcaagccggcggcggagcgctgcaacatccccgtgatgacgctgtggcggcgcacgcgcgcgctcggcgtcgtctccagccgcgcggcggggcggcggcggcggcgcgggcgcggcggccgcgccgccgtggctgccgccgccgccccagcggggagcggcgccgggacggacgcgcacgcgcgaccactgcttgcggcaggcccgaCGCCACCGCCGCCGCCGCAGCCGCCCGCCGAGGAGCGGGCGCGTGGGGGCGGCGGCGACGATGGCGCGGATTGCCCCGCACACCTCCTGAAACTGAAAGCGCCCACCTGGACGCAGGCTCAGCTGAGGGAGGCCATTCAGGCCGTAGTCTCGCAGAAGATGCGATTCACCCAGGCCGCCACGCGCTATGGCATTCCCAAGGGCACACTGTACGATAATATCCTGGGCAAATCAAAGCGCATGGTGGTGCTGGAGGAAGCGGGTCTCACGGCGGCCGAGGAAAGCGCCGTGCTCGAGTTCTGTTGCGAGGTCTCCCTCCAGCCCTACAACCGTAGGACGAAAAAGTCGCTCCGGGCCATTCTGAATTTTGTCGAGAAACTCAAGCGCATCCGAGAGCCGGACTTCTCCTTTTCGGGACTGTCGGGCTTCAGGTGGTGGTGGGCCTTCTGCAAGAAGCACAGCATCGTGTCGTTGTACTTCGACCCCGCCTACGACGAGGAGGCATAG
- Protein Sequence
- MHLHIAVAEWKRPFHNAHSGRARAGALPALENLRLTAPFSVAGQTAGKLACLAWRFYLVYRGATCWPRSLWCIAAPIKPAAERCNIPVMTLWRRTRALGVVSSRAAGRRRRRGRGGRAAVAAAAAPAGSGAGTDAHARPLLAAGPTPPPPPQPPAEERARGGGGDDGADCPAHLLKLKAPTWTQAQLREAIQAVVSQKMRFTQAATRYGIPKGTLYDNILGKSKRMVVLEEAGLTAAEESAVLEFCCEVSLQPYNRRTKKSLRAILNFVEKLKRIREPDFSFSGLSGFRWWWAFCKKHSIVSLYFDPAYDEEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -