GBI_00207-RB
Basic Information
- Insect
- Gryllus bimaculatus
- Gene Symbol
- MDP1
- Assembly
- GCA_017312745.1
- Location
- Scaffold1:22442146-22468959[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-16 5.9e-13 48.9 0.0 2 44 491 534 490 535 0.95 2 2 5.6e-09 7.6e-06 26.2 0.0 4 37 662 695 660 697 0.93
Sequence Information
- Coding Sequence
- ATGTCGAAGCCGAAGTTGATTGTATTTGATTTAGATTATACTTTATGGCCGTTTTGGGTTGATACGCATGTCGACAGACCTTTCAGAAAAGATAAAAATGGAGTTGTATATGATCGAAATGGACAAAAAGTGAAATTTTATCCGGAAGTTCCAGACGTTTTAGAAAAGCTGCAAACAGAAGGTTACACTTTGGCAATTGCATCAAGAACAGGTGAAATTAGAGGAGCCAATGAATTGGTTGAGTTGTTTGGATGGCAAAAATATTTTCAGTACAAGGAAATATATCCAGGATGCAAGGTTCAACATTTTACTGAGTTTAAGAAGCAATCTGGAATATCATTTGAAGAAATGATGTTTTTTGATGATGAACAAAGAAATATTAATGATTTATCTGCTGTTGGAGTGACGGCAATACTGGTGCCACATGGTGTAACGATGAAATTGTCTTTATTTACCATTAATCCTTGCCAACATCCAATTGTGATCTTGAAAGATGTCAAGTACAATGACCTCAAGATTATGGTTGATTTCATGTACTATGGTGAAGTCAATGTATCACAAGAACAGCTTCCTGCTATCCTTAAGACCGCGGAAATGTTGAAAATAAAAGGCTTAGCTGATACAGATCAGCATATCTCAGGTACTGTTCATATGATGAAATCTGAAAGTGCATCATCTGATAAAGCAGATCTTCTTACTCCTGGAGATTCAACATGGGGATCAGATTCTGCAAGGAGAAGTCCATCACCAATGTCTCCTTCAATGCGCAGGAAGAGGTTTCGCAAGTCTTCCACTGGATCTGGTTCTGGATCCACAGAGAGAACTTCAGAAGAAGTAACTAGTGAAATGTCTTTGGCACCTTCATTAGTAAAACCTGAGCCTGTTTCTTACACACCTGAAGCTGAGAGTGGAGGTCGCAGCGATAGTTCTTTGAGAAACAGCACTCAGGAGCCCAGTACTGACTCAGAACCTCGAGAAGGATCCCAAGACAGCACAGAAGATGACCCACTGTCTATGCAAATGTCACATGAGAGTAGCGTTGGAGTGGAAACCCAGATAGCAGACACTGGGCCTGGTCCTTCTACATCACAACAAAGTATGGCTTCCCAAGGCTTACAGTGGACGTTGCTGGAGCATGGTTACCCTCGCTTTGCACTGTCATCTTGTCAAGCTACTCTGTCAGTTCAAGCCACATCTGCCTTCTGCACTCCTGATCCCCCTTCAAATGCTTCGCAACCTCGACGGGATGGTGCCCAGTACACAAGCTCCACATATCAGTCTCATCAAATGTTGCCTATGTCCTCTTGTGCTGTAGTTGGCACTTACAGTCATCCCTCATCAAATCCTAACAGTCCTTATCCAACTTCATATACCAGTCCATGCACAAGTCCATGTATTAATCCCAATTCCATCAATATAGCTGGTCAAAATGCCCCAGTTCGACGGAAAAGAAGTAGTAATCCCCAAGCAGATGAGAATTTTGTGAGAGCTTTGGAAGCTGTGCGTTTGGGTGGAATTGGATTCTGCAAAGCAGCTCGTATGTTTGGTGTAAACAATCGAACATTATGGCTTGAGTACAAGAAACGGGGTTACCCTGTAACAAGACCAAGTCCAAGTGTGAAATCACGCATCAAACAAGAAGTCCCTACTTCATCACCTTCTCAACAGGCTAACAGTCAACCTGAAACAACACCTACCAATGCTCCGGTATCATCTTCCTCTGCCATGTGTCCTCCACCTTCAGTTGGTATGGTAGGAAATTTCATGGATTCTCGACATACCGATTATTCACATACACAAGCCCAGTCTCCGCCCAGAAACAGATTTCAAGAAGGATCAGAAAACCTTAACCCTTCCCCTGCAAATCTTCCTGCTATGAACTTTAATCCTCTTTTTACTGTGCAGCCTAGTTCACCTCGAGCAAAACTCGTTGAAACAGCTCAAGGGAAGAAACTCATCGTGTGCAACAAAGAAGTGCCAGTGAACATGCTTAGAGCAATTCGTGCTGTATTGCTTCAGAACTGTTCCATTAACAAAGCTGCCATTATGTACAAAGTGTCTCAATCTACCTTGTGGCGTTATGTTGGTCTTTTGCCCATGTGTGTTGGAGAAAAGGATTTGCACAATTTTATTACTTATGATGTTCCCATGAAGGATGAAGCACCTTCAACTGCCAATTCTGTAAAAAATGCATCTTTCCTTCCAGCTTGTGTTACATCAAATAAACCAGGCAAACGTGGGCGTCCGTTGATCCGTCAACCTCGAGTGAAGAAGGAAAGTGACCCGGTTCACACTTCTCCAGACAGTGAGCATGGCTCTCCACCATTCACCTCGGGTTCTCTTCTTACAGTACCTAATGTACCCAATGTTCGAGTTGAAAGGCCATATTCAGATCCACCCCCAATCTCGTCTACTCCAAACCTGCTGACGGTTCCACAACCCGCATACTTGGTGAAGCAACATTCAGATCCAATCCCTCCAACACATCATTCCTCAACTCCTCAACCACAGACTACTCTGGTAGTTCAAAGGCAGCTTTCTCAACCTAATCCTGGTCAAACGTGTGTGGTTCCTCCACCACCTTTTCACGTTCACCTTGTAACCGAAGCTCATCATCAGCCAACAGCATCCAAGCCTACTGAGTCAACTGTGAGGACTATCAGCCCGTCAGTAGTAATTGAACCATTACCAGTTCTGAGAGTTATAACTGATCATGGTGCAGAAACAGGCAAATCCTCTCAGTCATCAGGACTAAGAATAAGAACTGATGAACTGAGACGTGCTTCATCTTCACCACAGGCATCTTCTCCACGAGAGTCCTATGAACCATTGCGTTCTGGTCACTGCCCTGTTTTGCGTCCTGGGCCAGCTCTGGGTTGTAATTTTTGTTGGAATACTATTGATAATCATGGGCGTATTTTAAGACGAAAAACAAAATATCACTGTCCAGAATGCCAGACAAATTTGTGCATTGTGCCATGCTTCCAAGAATATCATGAAAGACATACAGCCACTGATAAAGAATCTTCAGGGTCAATGACTATATTAAAAGTATTGCCCAAGACAAGCTCCATCTAG
- Protein Sequence
- MSKPKLIVFDLDYTLWPFWVDTHVDRPFRKDKNGVVYDRNGQKVKFYPEVPDVLEKLQTEGYTLAIASRTGEIRGANELVELFGWQKYFQYKEIYPGCKVQHFTEFKKQSGISFEEMMFFDDEQRNINDLSAVGVTAILVPHGVTMKLSLFTINPCQHPIVILKDVKYNDLKIMVDFMYYGEVNVSQEQLPAILKTAEMLKIKGLADTDQHISGTVHMMKSESASSDKADLLTPGDSTWGSDSARRSPSPMSPSMRRKRFRKSSTGSGSGSTERTSEEVTSEMSLAPSLVKPEPVSYTPEAESGGRSDSSLRNSTQEPSTDSEPREGSQDSTEDDPLSMQMSHESSVGVETQIADTGPGPSTSQQSMASQGLQWTLLEHGYPRFALSSCQATLSVQATSAFCTPDPPSNASQPRRDGAQYTSSTYQSHQMLPMSSCAVVGTYSHPSSNPNSPYPTSYTSPCTSPCINPNSINIAGQNAPVRRKRSSNPQADENFVRALEAVRLGGIGFCKAARMFGVNNRTLWLEYKKRGYPVTRPSPSVKSRIKQEVPTSSPSQQANSQPETTPTNAPVSSSSAMCPPPSVGMVGNFMDSRHTDYSHTQAQSPPRNRFQEGSENLNPSPANLPAMNFNPLFTVQPSSPRAKLVETAQGKKLIVCNKEVPVNMLRAIRAVLLQNCSINKAAIMYKVSQSTLWRYVGLLPMCVGEKDLHNFITYDVPMKDEAPSTANSVKNASFLPACVTSNKPGKRGRPLIRQPRVKKESDPVHTSPDSEHGSPPFTSGSLLTVPNVPNVRVERPYSDPPPISSTPNLLTVPQPAYLVKQHSDPIPPTHHSSTPQPQTTLVVQRQLSQPNPGQTCVVPPPPFHVHLVTEAHHQPTASKPTESTVRTISPSVVIEPLPVLRVITDHGAETGKSSQSSGLRIRTDELRRASSSPQASSPRESYEPLRSGHCPVLRPGPALGCNFCWNTIDNHGRILRRKTKYHCPECQTNLCIVPCFQEYHERHTATDKESSGSMTILKVLPKTSSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00759450;
- 90% Identity
- iTF_00759450;
- 80% Identity
- iTF_00759450;