Basic Information

Gene Symbol
ARID4B
Assembly
GCA_017312745.1
Location
Scaffold120:2805708-2850647[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9 2.9e+04 -3.9 0.0 28 42 307 321 298 322 0.82
2 2 6.9e-30 2.2e-26 92.7 0.1 1 89 368 454 368 454 0.96

Sequence Information

Coding Sequence
ATGAAACAGTGGGCCAGAAGGCAGGAAAGAATGGGTGACGATCCTCCATTCCTTACTGTTGGCACAGAAGTCAGTGCAAAGTATAAGGGGGCATTTTGTGAAGCAAAAGTGCGGAAAGTTGTCAGAAGTGTAAAATGCAAGGTGACCTTCAAGCTCGGCCTTGGAACCATCAGCATAACGGACGACCAGATCCGGGGTGGCACGTTGCGGGTGGGTTCTGTGTGTGAAGTAAAGCATCCTGAAAAAAAAGAATTTGTTGAAGCAATCATCAATAAGATCCAAGATTGCAGTCAGTATACTGTAGTGTTTGATGATGGCGACATTACCACACTACGGCGTACTGCATTGTGTCTCAAAAGTGGTAGACATTTTGCTGAAAGTGAGACACTGGATCAATTGCCACTCACCCATCCAGAACACTTCAGTAATCCAGTGATCGGTGGCAGGAAGGGTCGTCGAAGCAGACAGGCACAGAAGAAAGGAGGGAAGAAAGAAAGGAAGGAAGGAAGAAAGGAAGGAAAAAGGAAGGAAGAAAGGAGGGAAGGAAGGAAGGAAGAAGAAAGGAAGGAAGGAGGAAGAAGGAAGGAAGAAGAAAGGAAGAAGACAGGAAGAAGACAGGAAGAAGACAGGAAGGAAGGAAGAAGAAAGAGGAAGGAAGAGAGTAGTGATGAAGAAGACCCGCCTAAAAAAGGAAAGAAAAAGGAAGAGAAGGAGGCAGATATCGGGAAGGTAGTATGTGTGGAGTTGGGTGATAAGAAGAAACAGAAAGATAATTGGTTTCCTGGTCTGGTGGTTGCACCCACAGCTCAAGATGCAGTGCGTATTAGAGTTAAAGATGAGTACCTGGTGCGCTCATTTAAAGATGGACGCTATTTTACGGTGCCAAAGAAAGAAGCTACAGAATTTACGAGAGAAATTGGTAATAAAGTGGATAATCACACTCTTAAAGCTGCTGTCGAAAAAGCTCTTCAGTATCTGGACCAGGATGAGCTGCCTCCACATTGGGATCGTGATCTGCTTTTTGGTCTTGATGAGAGCAGCGGAAACAGTGACAGTGATGGAGCTTTGGATTCAGATAGTTCTGATGATGAGCCGAGAGAAGAAAAAGATCATTTTGTAGCACAACTGTACAAATTTATGGATGATCGAGGAACACCTATTAATCGAGGTCCTACAATCGGCAGCAAGGATGTGGATTTATATAAACTTTTTAAGGTGGTGCATAAACGAGGGGGTTATAATAGAGTTACTAATCATAACCAATGGAAGACAATCTCTCAAAAATTAGGTTTTGGTCAAGGCAACTCTAGTGTTACAAATATGGTAAAACAGTCTTACAAAAAATTTTTACATAGTTTTGAGGACTTTTACCGAAAACTGGGATGCACTATGGTAAATCATCCTCGTGGGCATCGTTCACGTCACAGAACAGGCCGGAGTTTAATCAGAGATCGTGATAGGGCTACACCTACTAATATTGCCAAAGAAAAAGAAAAGAAGGAAGAAAAGGCTGTGTCTACAGAAAAACCATCAACCTCAGAAACTGCTGAGAAGGAATCTCTAGAAAAGAAAGAAGAAGAAAAAAAAGACGATGAAAAGAAGGAGGAAGTTAAACCAAGAGAATCTGCAAAGAAATCAAAAATTCGGGATGATAAGACTGATGCACAAAGCAAACAAAAAGGAAAAGATGCTCTTGACAGCACTCAGGCAGAAGGAGAAGAAAAAGACAGTCGATCACGAAATAAAAAAGAATTTAAACCAACTGAGACCAAAGTTTCCAAATTATTTGAAAATTTAGAAAAGGAGGAAACGGTCCCTAGTTCAGAAGAATTGCCTGAGAAAGAACCAGGGCATAGTGAAGAAACAAAGACACGTGAACCAAAGAGCAAAGGAAGGGAATCAAAACCTAAAGAAAGAGGAAAGGTTAGTGACAAATCTAAAAACAAAGATGACAAGGTCAAAGTTTCTGAAGAAGAGAAGAATGAAGATGTTAAAAAGAAGGTTGAAAAGAAACCTGCTGTAGAAGAGGATGAAAAGAATACCCGAGTAACAAAAGCAAAAGAAGATCCAAAAAGCAAAAAGGATAGTCCCCGCGATACTCGCACACCTGTACGTGACTCGTCAAACAGAACACCTGTGCGACTTCGGAAGGAAGAGGAGAGTGCAGCTACAGCGATGATGGCGGCGACGCCTGCGACGGCTCCTATGGCGGCGGCTGCACCGTCGCCGGTCGGACCGGCGGCTGCGCCGGCAGGGGCAGCAGCAGCGGCAGCTGCTGCGGCAGCGGCAGCATCAAATACTGCTGCAAATCTTAAAAAGAGGGGACGAAAGCGCAAAGAAACAGATGAAAAGGTCAAAGCAGAAGAATCACTGGGTCATCTTGCCAGCAATGTGGCAGTTTGTGTGGGTGATAAGCTCAAAGTGTATTATGGACCTACACATGAATCAAAGGTCACATATGAAGCAAAGGTGCTAGATATCGAAGAGGATGGTAGCGAATGCATGTATCTGGTGCATTACACGGGCTGGAACACTCGGTACGACGAGTGGATCAAGCGTGGGAGAATTGCAGACAATCTGAGCTGGACGCCTTCTAGAGCCAAACGCCAGAGGCAACAGCAGTCTCAGCACAAGACATTGCGGCCATCTCATGGGAAACGTGGAAGGCCTTCAGTCTCAAATCGAGGACATGATGGAATGCCTAATCCTCCACGATCTACCACACCCTCTTCAGTAACATCGTCTTCTAGTCGTACAAAATCGCCTGCAACACGCTCTACCCCTCGAACTGGGCGCAGTGCTGGTGATAATGCATCACCAGGCCACGAGTTCAGACGTCGAACACGAAGAATGTCAGGACACACAGGTGTGTGTTTGTCCATGTGGCTTTGTACTTGTATGAGGAAGCAAAACTGA
Protein Sequence
MKQWARRQERMGDDPPFLTVGTEVSAKYKGAFCEAKVRKVVRSVKCKVTFKLGLGTISITDDQIRGGTLRVGSVCEVKHPEKKEFVEAIINKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFSNPVIGGRKGRRSRQAQKKGGKKERKEGRKEGKRKEERREGRKEEERKEGGRRKEEERKKTGRRQEEDRKEGRRKRKEESSDEEDPPKKGKKKEEKEADIGKVVCVELGDKKKQKDNWFPGLVVAPTAQDAVRIRVKDEYLVRSFKDGRYFTVPKKEATEFTREIGNKVDNHTLKAAVEKALQYLDQDELPPHWDRDLLFGLDESSGNSDSDGALDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINRGPTIGSKDVDLYKLFKVVHKRGGYNRVTNHNQWKTISQKLGFGQGNSSVTNMVKQSYKKFLHSFEDFYRKLGCTMVNHPRGHRSRHRTGRSLIRDRDRATPTNIAKEKEKKEEKAVSTEKPSTSETAEKESLEKKEEEKKDDEKKEEVKPRESAKKSKIRDDKTDAQSKQKGKDALDSTQAEGEEKDSRSRNKKEFKPTETKVSKLFENLEKEETVPSSEELPEKEPGHSEETKTREPKSKGRESKPKERGKVSDKSKNKDDKVKVSEEEKNEDVKKKVEKKPAVEEDEKNTRVTKAKEDPKSKKDSPRDTRTPVRDSSNRTPVRLRKEEESAATAMMAATPATAPMAAAAPSPVGPAAAPAGAAAAAAAAAAAASNTAANLKKRGRKRKETDEKVKAEESLGHLASNVAVCVGDKLKVYYGPTHESKVTYEAKVLDIEEDGSECMYLVHYTGWNTRYDEWIKRGRIADNLSWTPSRAKRQRQQQSQHKTLRPSHGKRGRPSVSNRGHDGMPNPPRSTTPSSVTSSSSRTKSPATRSTPRTGRSAGDNASPGHEFRRRTRRMSGHTGVCLSMWLCTCMRKQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-