Basic Information

Gene Symbol
grh
Assembly
GCA_017312745.1
Location
Scaffold196:2135543-2259484[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.9e-30 3.2e-26 92.7 0.0 28 148 415 530 402 533 0.94
2 2 3.2e-18 1.1e-14 54.9 0.1 169 221 533 584 530 586 0.92

Sequence Information

Coding Sequence
atggggccgcgggcggggcgggcctgggagctcgtggcgctcctcccaaccggcggccgaactgcaaggcctgtcttgcAGCAGACGCAGCAGCAGCAGTCGCTGGCACAGCACTCTGTCCACTTGTCGGGCGCACCGGCGCCGCCGCAGCCCCAACACGCGCAGCAGCCGCAAGCGGGCGGCCAACCCCAGCAGCAGGTGGTTGTGAAGCGCGAGCCCGAGGACCTGAGCCACCACCGCCACAAGGCGGGCACGGCGTCGCCGCCCATCATCCTCAACAAGGCTCAGCAGCAGCAGCAGCAGGCGCACGCGCTGTCGCGCCACCACAAGCTCGTGTTGGTGGCCAATGGGGCGGCCGGGCACCACCAGCAGGACCTGGTGGACGTGAAAGAGGAGACGCACCGCGGCCTGGGGAGCCCGCAGCACGGCTCCCGCTCCATCAACGGCACGCCGTCGTCCACGTCGTCCTTGCTGGCGACGGACGGCGGAagcagtctccgggcatcggaccggcgatcccatgggccggcggcgcggcgcggcggcggaccaacaccacagcgccacccctcgccccattcccgtactcggagcacgcgtgcgcgtcgtgcagctactcgtcggccgggcctgacgtcgagcgcgaggcgccgtgcgcggttacgtagagcggcggcgacggacggagcgccacgaCTGCGCGCCACGTCGTCGGTGGCGGCGGCCGCGGCGCCCGCCGCCTTCGCCGTGTCGCCCGACGCCTACTACGGCGAGTACTTCACGACGGAGCGCGGGTACGCGCCCGTGCGCCAGCAGCAGCAGCAGATCCCGGCGTACGCGGAGAGCCCCGAGGGCCCGGGGGCCGGCGCCGGCGCGGCCGCCGCCTCGGGCAACGCCGCCTTCGTGGAGCGCTACGTGCGCCAAAACAGCGCCTTCAGCAAGAGCGCCGGGCTGGCGGGCGCCGCGGGCGGCGGCCTCTCCGTGGACCTGCCGTCGCCCGACAGCGGCATCGGCACCGAGTCCATCACCCCTCGCGACCAGGCCGCGCTGCAACAGCAGTTCGACTACGCGGAGCTGTGCCAGTCGGGGGCGCTGATGGCGGACCCCATGGCGGCGCGCGGCGCGGCCCCGCCCCCCGGCTCCACCACCCCCACCACCCCCGGCGGCGGGCGCTCGCGGCCCTGGCACGACTTCGGACGCCAGAACGACGACAAGATCCAGATCCCCAAACTGTACCTGCAGTACGGGTTTAAGTACCACCTTGAGTCTCCCATCTCGACGAGCCAGCGCAGAGAAGACGACCGCATCACCTACATCAACAAGGGCCAGTTCTACGGCATCTCGCTGGAGTACATCCCCGACCCGGACAAGCCTCTCAAGAGCAACACCGTCAAGAGCGTGGTGATGCTGATGTTCCGGGAGGAGAAGAGCCCCGAGGACGAGATCAAGGCCTGGCAGTTCTGGCACGGCCGACAGCACAGCGTCAAGCAGCGCATCCTCGACGCGGATACGAAGAACAGCGTCGGGTTGGTGGGATGCATCGAGGAGATTTCCCACAACGCCATCGCAGTATACTGGAACCCTCTGGAAAGCTCCGCAAAGGGTCTGCCACTCCACCTGCAAATCGACACCTACGAAGACCCGCGAGACACGACTGTGGCGCACCGCGGCTACTGCCAGATAAAGGTGTTCTGCGACAAGGGAGCCGAAAGGAAGACACGTGACGAGGAGAGGCGCGCGGCCAAGAGGAAGATGACGGCGACAGGGCGCAAGAAGCTAGACGAATTGTATCACCCAGCAGCAGAACGCTCAGAGTTTTACAGCATGAGCGATCTCACAAAGCCTCCTGTACTCTTCTCGCCAGCCGAAGACATCGACAAGCTGGCGTCCATGGAGCTGGGATTCTACGGCCACGACCCGGACGGCTCTAGTCTGTCCAACGGAGAGGCGGGCGGGACGAACCCCGGCCAGCTCGCGAAGCACGCCTCGCCTTTCCTCCTGCACTCCAGCAAACCCAGCGCCACGCCGACTCTCAAGTTCCACAATCACTTTCCCCCGGACGTACCTGGCGAGAAGAAAGATACTGGGTTAGCGGATGCCGCTGCTGGTCTTGGTGCTACTGATGGCAGTGTGTTTGCCTGTCCACCGCAGAAGCGACACAAACTGTTGTCGGGAAATGTGGGCCCGCCTCCGCTCAGCGAGAGAGTAATGCTCTATGTGAGGCAAGAAACAGAAGAAGTCTACACCCCCCTACATGTTGTGCCACCTTCCACACAGGGACTGCTCAATGCTATTGAGAATAAGTACAAAATTTCTACTTCAAGCATTAGTAACTTGTATCGAAAAAACAAAAAAGGGATTACGGCCAAAATTGACAATGACATGCTCAAGTACTATTGCAATGAGGACTTGTTCCTTTTGGAAATAAAGCAAGGAGATTCGGATGACAGCTATGACATCACTCTAGTTGAACTAATGGATCACTAG
Protein Sequence
MGPRAGRAWELVALLPTGGRTARPVLQQTQQQQSLAQHSVHLSGAPAPPQPQHAQQPQAGGQPQQQVVVKREPEDLSHHRHKAGTASPPIILNKAQQQQQQAHALSRHHKLVLVANGAAGHHQQDLVDVKEETHRGLGSPQHGSRSINGTPSSTSSLLATDGGSSLRASDRRSHGPAARRGGGPTPQRHPSPHSRTRSTRARRAATRRPGLTSSARRRARLRRAAATDGAPRLRATSSVAAAAAPAAFAVSPDAYYGEYFTTERGYAPVRQQQQQIPAYAESPEGPGAGAGAAAASGNAAFVERYVRQNSAFSKSAGLAGAAGGGLSVDLPSPDSGIGTESITPRDQAALQQQFDYAELCQSGALMADPMAARGAAPPPGSTTPTTPGGGRSRPWHDFGRQNDDKIQIPKLYLQYGFKYHLESPISTSQRREDDRITYINKGQFYGISLEYIPDPDKPLKSNTVKSVVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEISHNAIAVYWNPLESSAKGLPLHLQIDTYEDPRDTTVAHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPAAERSEFYSMSDLTKPPVLFSPAEDIDKLASMELGFYGHDPDGSSLSNGEAGGTNPGQLAKHASPFLLHSSKPSATPTLKFHNHFPPDVPGEKKDTGLADAAAGLGATDGSVFACPPQKRHKLLSGNVGPPPLSERVMLYVRQETEEVYTPLHVVPPSTQGLLNAIENKYKISTSSISNLYRKNKKGITAKIDNDMLKYYCNEDLFLLEIKQGDSDDSYDITLVELMDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00872081;
90% Identity
-
80% Identity
-