Basic Information

Gene Symbol
XBP1
Assembly
GCA_017312745.1
Location
Scaffold35:8558557-8561602[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 3.2 5e+03 -1.8 0.0 16 25 73 82 72 85 0.81
2 4 5.1e-16 8.1e-13 48.8 6.7 2 46 87 131 86 133 0.95
3 4 2.2e-05 0.035 14.8 6.8 30 60 129 159 128 160 0.94
4 4 3.3 5.2e+03 -1.8 0.0 6 16 300 310 295 312 0.80

Sequence Information

Coding Sequence
ATGAGCGCAACGAAAACTATTATTATATCAACACCGAAGTTCATTACGGCAGAGCCCGCGTTCGAAGTTGCTCTTTCCCCAGGAAACTCATTGTTAAACACCAATATCCGTAAACCCAGTCAAATGAAAAGGGCGTCATTTCAGTGCATTAGTACAATGGAGAAAATTGCGTGTCCTCCAATGTCCTCGTCGGTGTTGGGCGTAGAAGCCCCTTCCCCAGCATCTTCGAGAAAAAGAAGATTGGATCATTTGTCATTGGAGGAAAAAATTCAGAGGAAAAAACTCAAAAATAGAATAGCTGCCCAAAGTTCAAGGGACAGAAAGAAAGCAAAAATGGATGACTTGGAGATTGAAGTAAAGGAGCTGAAAGATGAGAACAAGATGCTGACTAACAGATGTCTGAGACTGGAGGAAGAGTCTCAGCGGCTGGCTGAGGAGAATAAGCAGCTTCGTGAGCAGTTGAGTCAGACCCGTCGTGTCGGCTGCGAGCCTACCGCAGCTACTGGACCTGCAGAGTCCTGGGCCTTCAACCCTCCGCAGCAGGGGCGGGGCTTGGAGCCGGCACGGGGCCTGGCGCTGCTGACGTTGCTGCTGATGGCTCTCTCCCACCGCTACCCGACCTCCTGGATGAACTTGATGCTCGAAGAGTTGGCAGACAGCCTCCTTAAAGAAAGTGCAGACAGCCTCCTTAAAGAAAGTGCTACTAACCTTGTCTCAGATGAAGGAAAGACGAAGGTTACTGGAGATTGTGAAGGAAATGGCAACATTGAAATGGTGGGGCCGTCATCAAAAGAATTGGAATCCTGTAGAGATTCGATAAAAGAAGAGGAAGAAATGAAAACTGTTACATGTCCCTCTACACCAGTGCAAGTTGCTTTGCTGGAGAGTCCTAATTCCCTATCAAGGTTACAAAGAAATAATACTTCTCCAAATACTTTGTCTTCTGCTACAGAAACAGTGTTTGGAACATATGACGAAGGCACACAGACGCTAACAATCATTGTCACTCCTAGTGAAAATGATATATGCATTGAAGAAGCGGTACAAGAAGTGGTTACTTGTGAGACTGATTCAGCCCTGACTGCGGTCTGCAAGGATGAACCCATGTATGACTTGCTGTCACCAGGAAGTCATTTAACTGTTCCATCATCACCTGGATTTTATGAAAATTCGGACTATTCAATGAAAATGGAAAATGCTCCATCAGACTGTGGCTATGAATCTGTTGACTCGCCTCTTAGTGAAAGTTCTGGAACTGGCGATCTCAACAATATGTGGAACGAATGTTTTTCTGAACTATTTCCAAGTTTGGCATAG
Protein Sequence
MSATKTIIISTPKFITAEPAFEVALSPGNSLLNTNIRKPSQMKRASFQCISTMEKIACPPMSSSVLGVEAPSPASSRKRRLDHLSLEEKIQRKKLKNRIAAQSSRDRKKAKMDDLEIEVKELKDENKMLTNRCLRLEEESQRLAEENKQLREQLSQTRRVGCEPTAATGPAESWAFNPPQQGRGLEPARGLALLTLLLMALSHRYPTSWMNLMLEELADSLLKESADSLLKESATNLVSDEGKTKVTGDCEGNGNIEMVGPSSKELESCRDSIKEEEEMKTVTCPSTPVQVALLESPNSLSRLQRNNTSPNTLSSATETVFGTYDEGTQTLTIIVTPSENDICIEEAVQEVVTCETDSALTAVCKDEPMYDLLSPGSHLTVPSSPGFYENSDYSMKMENAPSDCGYESVDSPLSESSGTGDLNNMWNECFSELFPSLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-