Basic Information

Gene Symbol
pli1
Assembly
GCA_025774375.1
Location
JAOPJC010596781.1:4797-7314[-]

Transcription Factor Domain

TF Family
zf-MIZ
Domain
zf-MIZ domain
PFAM
PF02891
TF Group
Zinc-Coordinating Group
Description
This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.5e-14 1.2e-10 40.6 0.0 2 46 226 270 225 274 0.92

Sequence Information

Coding Sequence
ATGAACTTAGAGTTAGTTTACTTTGTTGTTACGTATTCAAATATTCATAATGATATGCAGATTACATCAAATCTTATTGATTATTTCACCGTTGATAAATTAAAGAAAGTTATTAAAGCTTTTAATGATGTTCTACCTTCGCATTTAAGACTGTCAGGTAATAAATCAGATCTAGATAAAACAGTTAGAAATGCTTTTTTAGAATTTAGAATACCTCAAGAATTTTCATCAAAATTGTATCAGTCTAGAGTAGTTTCAAACCAATCTATTCGTTATCAACTTAGAATTTACGCTGCTTCATCAGATTTTCATAAACCTCATATTAACTCTTTATTACCAATAGAATTCCCTTTATTATGTGATATTAAAGTTAACGGTCGTCACATAAAAGTTAACACAAGGGGTGTTAGAAATCAGCCTGGTACTGCCGCACCGCCAAATGCAGACTTTGAAAAAACTTTAAACTTAAGGCCAAATGATTTAAATAATATAGAAATTTTATATAGAGATACTTCTAAGAAACATTATATTGTTGTTAATTTAGTTGAACAATATTCAGTTGATTATTTGATTAAACAAATTGAAAATAATCCTGAAATACCAAAAGATTCTGTAATTGAAAAATTCAGGAATGAACAAGATCAAGATGACGTTTTAACAGTTTCATTTACGTTAAATTTAAGATGCCCAATTGGATTTTTCAGAATGAAAACTCCAATAAGGTCAACGCAATCTGCTTCGATTCAATGCTTTGATGCTACATCATTCTTCTCAATGAATGAGCAAACTCCAACTTTCACGGATCCAATTCAAAATAAACCTATAAAATTTAAAGACCTAGCTGTTGATGGATACACTAATTCAATCTTACAATGTACCCCTGATGAGGTTGAAAGTGTAACTGTTGAACCTGATGGCGAATGGCATACGGACGATGGTAAACATGGATCACAACGGTGGATGGAACTAAATAAATCATCTATATCTAATCATGTAGAAAAATCATCGTCTAAGCAATCTAATTTAGATCTACAGGAAGATAAAAAGACTATTAATAAAAATGATGAAATTTTATCTCTTTCTAGTGATGAAGAAGATGAGCGTGGTGGAGATGGAAACATTTCTTTAAAACAATCTGCTCAAAAATCTAAAAATAAACAAGTTATAGATTTAACTTTATCAAGCGATGAAGAGGATGAAAATTCATCGCCTTTACCACCAGCTATTAAAGTCAATCATAGTAATAACAATGATATAAGCGGTGTTATTAATACAGGCCAAAAGAGAGGACATGAGGATGATAATATAGTTGGTGAAAAGCGTAGACGGGAAATGTTTGAAAATGCTCTGGCTTTGAATAATATAGGCAATCAAGATAAAAATCAAGAAAATAATAATATAAATAACGGTATTAATAACGAAAATGATGAAAGTAATAACCAAGGGATGAATGAAAGTAATGATAGATCACATTCTGCACCTGCCAATGTTAATGATTCAGTCGCGCCAACAGCAAATTTAAGTAACATTAGACCACAAATTAATTCACATCAAAAGTTTAACAATCCATTTATGAAAACTAGACCAGCATTGAACTTTTTACCTGGAGCTCAATATAAGCCTGATAATTTTAGACCGACAAATGTTTCTCAGCCTCCTTCAAGTCATTACATAAATCCTCAACAACATCAAAACAGCAATCAACAAAATTTTATTCCTATGCTTAAAAAGGATCATAATGATAATAATGCACCTCAACAACATAATAATAGTAATAATCAAAATACACCGGCAGATCCTTATATTTCATCTTGG
Protein Sequence
MNLELVYFVVTYSNIHNDMQITSNLIDYFTVDKLKKVIKAFNDVLPSHLRLSGNKSDLDKTVRNAFLEFRIPQEFSSKLYQSRVVSNQSIRYQLRIYAASSDFHKPHINSLLPIEFPLLCDIKVNGRHIKVNTRGVRNQPGTAAPPNADFEKTLNLRPNDLNNIEILYRDTSKKHYIVVNLVEQYSVDYLIKQIENNPEIPKDSVIEKFRNEQDQDDVLTVSFTLNLRCPIGFFRMKTPIRSTQSASIQCFDATSFFSMNEQTPTFTDPIQNKPIKFKDLAVDGYTNSILQCTPDEVESVTVEPDGEWHTDDGKHGSQRWMELNKSSISNHVEKSSSKQSNLDLQEDKKTINKNDEILSLSSDEEDERGGDGNISLKQSAQKSKNKQVIDLTLSSDEEDENSSPLPPAIKVNHSNNNDISGVINTGQKRGHEDDNIVGEKRRREMFENALALNNIGNQDKNQENNNINNGINNENDESNNQGMNESNDRSHSAPANVNDSVAPTANLSNIRPQINSHQKFNNPFMKTRPALNFLPGAQYKPDNFRPTNVSQPPSSHYINPQQHQNSNQQNFIPMLKKDHNDNNAPQQHNNSNNQNTPADPYISSW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-