Basic Information

Gene Symbol
-
Assembly
GCA_025774375.1
Location
JAOPJC010996246.1:254-1696[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 4.1 5.5e+03 -2.8 0.0 4 16 154 166 153 169 0.83
2 6 3.2 4.3e+03 -2.5 0.0 22 33 228 240 225 245 0.78
3 6 5.5e-06 0.0074 16.0 0.1 1 45 259 305 259 306 0.88
4 6 4.9e-09 6.6e-06 25.7 0.3 2 43 313 358 312 360 0.93
5 6 7e-10 9.3e-07 28.5 0.0 1 43 365 407 365 408 0.98
6 6 6.7e-06 0.009 15.7 0.0 3 34 417 450 415 452 0.93

Sequence Information

Coding Sequence
AtggatatagattttgaattcgaagacagtgattttgatagtgaatcagaatcacatcaacagcttaatgaattgcttaaCATTCAGGGACCATCATCTAGTATATCCTCGTCTCTATTTTCTTCTAATGGAAGCGAAAATAGTTCTTTTAAACAGTCAGACGAAGAAGCTAAAATTGATATTACGCTATCTTTAAATAGACAATACGATGATAAGCTACGAAGACTGGAATCTATTTTAAATGGAAGACTCTATGAATGTGACCTTAAGCTTAGTGAAATAATTCTTTCCGATAAAAATAATAAATCTGTTGACAAACAAGAGTCATTTAGATATATCAACTGTGGAAGGCCCTATTTTAAGGATAAAGATAACTTCACACCTCCTAATAATGAAGATACTGTTGCTATGATGGCAATGGGAATGTATGATTTATCTACTTTATCATCAGTGCCTGGTTGGACAGTCAAAGACAAAAGCCAATTCCTTCAAATGCTACTTAAAATGTCTAGAGAAATAAAGAGAAAGGAGATAGAAAGGAAAATATCCGAGTTAAAACGCGAAGCTAAAAACAATCCTAGTGAAAAGATTGAGAGAAACATAGGCTTGCTAAAAAAGGAACTGGAGAATGTTAAAAAAAAGTTATTGAAAGATGTAGCATTGCCCATTAATGAGGACTATGATTGGGAGCTGCTAGCAAACAAATTAAACTGCCGACATTCAGCGCATGAATACAAAACTCTTTGGAAATTATTCTTACATCCGAGTATTAATAAAAGTAATTGGACCAAAAGTGAACATACGGCGTTACAAACAATTGGTAACGTAACTAATTTTCAAAACTGGGAAGAAATTGCTTTCAAACTAGGAACAAAACGTACTGGTTATCAATGCTTTGTTTATTTCCGTACAAATATGAGCAACACATTTACAGGTCAGAAATGGAGTAAAGAAGAAGAGGAATATCTTAAAAGATTAATTGACTATTACAGGGAAGATAATTATATACCGTGGGGAAAAGTGGCAACATCAATGGAAAATAGAACAAAAATACAAATTTACAATAAATATGCTCGACTTAATGAACAAAGAAAAGGAAGGTTTCTACCTGAGGAAGATGCTGTTATTCTGACGTGTGTTGATCATTTTGGGCCTAACTTTAAGAAAATGACTAGCTTCATTCCAGGGCGATCCAGTGCACAGTTACGATTGAGATATCACATTTTAGGTAATAAGAGAATATCTACAGTTTGGACAGTAGAGGAAGACAAAAAACTTTTAAAATTGCTTGGTAATGGTGGTTTCGAGAAATTAAGGAACATATTTAGTAAGATGCCAGCAAATAAATCAATATATCGTAAAATA
Protein Sequence
MDIDFEFEDSDFDSESESHQQLNELLNIQGPSSSISSSLFSSNGSENSSFKQSDEEAKIDITLSLNRQYDDKLRRLESILNGRLYECDLKLSEIILSDKNNKSVDKQESFRYINCGRPYFKDKDNFTPPNNEDTVAMMAMGMYDLSTLSSVPGWTVKDKSQFLQMLLKMSREIKRKEIERKISELKREAKNNPSEKIERNIGLLKKELENVKKKLLKDVALPINEDYDWELLANKLNCRHSAHEYKTLWKLFLHPSINKSNWTKSEHTALQTIGNVTNFQNWEEIAFKLGTKRTGYQCFVYFRTNMSNTFTGQKWSKEEEEYLKRLIDYYREDNYIPWGKVATSMENRTKIQIYNKYARLNEQRKGRFLPEEDAVILTCVDHFGPNFKKMTSFIPGRSSAQLRLRYHILGNKRISTVWTVEEDKKLLKLLGNGGFEKLRNIFSKMPANKSIYRKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-