Basic Information

Gene Symbol
Arid2
Assembly
GCA_025774375.1
Location
JAOPJC010950870.1:201-1152[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.7e-20 6.5e-16 58.1 0.9 2 89 5 95 4 95 0.86

Sequence Information

Coding Sequence
ATGACTTCAAAGCAAGAACAATTTATCCAAGATTTGGTACAATTTTACCGAAGCCGTGGGATTTCCAATGTCAATCAAAACCAATTTGTTGTACGACTAAATGGAAAAATTGTTGATCTTCATGAACTTTATTCGTATGCTCTTGAATACGGTGGCAGCTATAGGGTAAATCAAGTTAATCTATGGGAAGAAATCTACTCAAAATTGTTCAGAACCAAATGCGTAGGAGCTAATTTTGCAGTGGCTTTGAGACAGATCTATAATAGATATCTGCTTCAATATGAAAAGTCTTGTAGCACCAATGTTAACAACGAACAGTGGAATGAAGAGGAAGAAGAAGAGAGtagtttattttctgtgcacaccaaccacagccactatagtcacatgtttcatcaccagccaccacaacagttgaacaatgttacggagaCATCGGGAAAAGTTCACAACGATACCAAACTTTATTGTTCGCTACTTAGTGGTCTTCCAAATGAACTTCATTTTGCTTTTAACATTGCCACCATTCTAAGCAACTGCAATCGTTTTGATTGGGCTAATGACTACAAGTTTATCAATGTTTTGATTGAATCATTGAAGAGTTACTGTTGTGTTTGTGATCAAATTGATGAAGATCTTTCGTTTGGTCGAACAGAATTTACCGACGAAGATGAAATCTTGAATTTTGAAAATTATATAAACTACAGTATTCACCGGCAATTTGATGATGTCAAAGCCAAGAGTAACGGTATTGACAGCCAGCAAGTTATAGTGATTGACGACAACAAGTTCGATGATCAGGATCAAGCCTCTCGGAGCTGCAACTTAGAG
Protein Sequence
MTSKQEQFIQDLVQFYRSRGISNVNQNQFVVRLNGKIVDLHELYSYALEYGGSYRVNQVNLWEEIYSKLFRTKCVGANFAVALRQIYNRYLLQYEKSCSTNVNNEQWNEEEEEESSLFSVHTNHSHYSHMFHHQPPQQLNNVTETSGKVHNDTKLYCSLLSGLPNELHFAFNIATILSNCNRFDWANDYKFINVLIESLKSYCCVCDQIDEDLSFGRTEFTDEDEILNFENYINYSIHRQFDDVKAKSNGIDSQQVIVIDDNKFDDQDQASRSCNLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-