Basic Information

Insect: Gortyna flavago
Gene Symbol: Sall1
Assembly: GCA_963669345.1
Location: OY770135.1:2860713-2871361[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.9 2.3e+02 3.3 0.3 2 23 7 28 6 28 0.96

2 14 0.12 9.7 7.6 1.3 1 23 1008 1031 1008 1031 0.92

3 14 6.1 4.9e+02 2.3 0.6 1 23 1110 1132 1110 1132 0.90

4 14 3.4e-05 0.0027 18.8 2.5 2 23 1135 1156 1134 1156 0.97

5 14 0.00024 0.019 16.2 2.4 1 23 1162 1184 1162 1184 0.98

6 14 0.0089 0.72 11.2 2.5 2 23 1191 1212 1190 1213 0.95

7 14 0.42 34 5.9 3.0 5 23 1226 1244 1225 1244 0.96

8 14 0.022 1.7 10.0 1.1 3 23 1251 1272 1250 1272 0.96

9 14 0.0018 0.15 13.4 0.5 2 23 1289 1309 1288 1309 0.98

10 14 0.00083 0.067 14.4 1.0 1 20 1315 1334 1315 1337 0.89

11 14 0.0012 0.093 14.0 0.4 1 23 1345 1367 1345 1367 0.98

12 14 0.0063 0.51 11.7 7.2 1 23 1373 1395 1373 1395 0.98

13 14 7.8e-06 0.00063 20.8 1.4 1 23 1401 1425 1401 1425 0.98

14 14 0.0012 0.099 13.9 4.2 1 23 1431 1453 1431 1454 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.9	2.3e+02	3.3	0.3	2	23	7	28	6	28	0.96
2	14	0.12	9.7	7.6	1.3	1	23	1008	1031	1008	1031	0.92
3	14	6.1	4.9e+02	2.3	0.6	1	23	1110	1132	1110	1132	0.90
4	14	3.4e-05	0.0027	18.8	2.5	2	23	1135	1156	1134	1156	0.97
5	14	0.00024	0.019	16.2	2.4	1	23	1162	1184	1162	1184	0.98
6	14	0.0089	0.72	11.2	2.5	2	23	1191	1212	1190	1213	0.95
7	14	0.42	34	5.9	3.0	5	23	1226	1244	1225	1244	0.96
8	14	0.022	1.7	10.0	1.1	3	23	1251	1272	1250	1272	0.96
9	14	0.0018	0.15	13.4	0.5	2	23	1289	1309	1288	1309	0.98
10	14	0.00083	0.067	14.4	1.0	1	20	1315	1334	1315	1337	0.89
11	14	0.0012	0.093	14.0	0.4	1	23	1345	1367	1345	1367	0.98
12	14	0.0063	0.51	11.7	7.2	1	23	1373	1395	1373	1395	0.98
13	14	7.8e-06	0.00063	20.8	1.4	1	23	1401	1425	1401	1425	0.98
14	14	0.0012	0.099	13.9	4.2	1	23	1431	1453	1431	1454	0.95

Sequence Information

Coding Sequence: ATGGACCAACTCGTGGTGCAATGTCCCGTGTGCACACTATTCTTGCATAATGGGATAACCCTGGAGTCCCACTTGGATACCCATCCCAAAGACCAGGTTATAAAAGCTTTGTGTAATATAGCAAACAAGGGCTCTAATTATGCCAGCAGGACTTCCACACCGGTACATTCTGAGCGGTCATACAGGAGCAGGTCACGAACACCTGCCACTGATGACAGTGCCAAGTGGGCTGGTTCACGAAGTAATGATCATGAGCGCTACTGGCGTAGGACACCTAGTAGAACCTCCAAATCGACTCCAGTATCAAATACATCTAGAAATGGTACACCTGATATTAGAATGCTTGATGTTAACTTTGAGAACCATGGCATTGCTGGTGGTGGTGCAGGACAACATGTAAACAATCCATTTCATTCAAAAGCTGAGAAGCTCCAGCAAACTTTCCAGTGTCCTCCAGTTCCAGAGTATGATCCACAGTTTGTTTACTATCCAGAGCAACAAGAGGACAGGGAGATTAAGTATTCCCGGAGTGCTGAGTACAATGCCATGGACAATAATATGTTTTCTTACAACATGCCACCTATGGCAGGGtcaggtgtgaaactgttaCCTGGTGTGCCTAGAAAAGCTAATGACCTTGTTAAAGTTCTACCAAAACCAAATAACATACTCCTTAAGACCAATATGGGTGGTGTGCAATACATAGGTCCAGGGGCCAAGCCCATGCATGTTATGGTGCCATCTGCACCTACATTCATCCAGAAGAACCTGCAAAACAACATGATCATGACCAGCAGTGTACCAAACCCACAGATGCACATTGATACCAAAACAACTTCACCCCCTCTAGCTAGCAACCAACTGAATCAAATGACTTCTGGGGCTTTCACTCCAGGAACAACTGTTGTTACCCAAAACTCCCAAATTATTTACAGAGAAATGGTGCACAACATAGACGGTAAGCCCTTTATAACAACCATGCCTACAGTTCTTGGTGCTCACGACAATGTTTCTAATTTAGCTCAAGCTAGCTCCATGTATCAAAATGTTATGGTTGTAGATCAGTTTGGAAATACTTCATGTATGTATACAACACCTCAACAAATGATGAACAAAGCTTGTCCCACATCCATTTATAATGAGTCTGGTACTCTTATGCCTAATGCGCACATTGATAAATCTGTACAAAATATGACTGATCCGAAAACACTTATTATTGAGGTTGGTCCACTCATAGCCCCAACTCATGAAAATATTTGTGAAGATCCAAGCTCCACTGTGCCACTGCCAGTCACCAGCAGTCCAGTTGGCCATACTGACATACCCATTGAGACAGTGGACCCAAAATATGAAATGCCAGGCAGTACTAAAGGCTTAAAAATTCTGAGCAACATTAAGGTGGAAGTTCCTGTGCAACATCACAAGAACATGGTTAACACTGTGATGGATCTAACTGGGCCTAATGAGACAGATTATCCTGTAGAACGTGTAAATTCACCTGACAAGATCCTGCCTGATCTAGAAGATAACAACCAACTGTCATCTGATGACACTCAGCCTTCATCAATGTCCAGTGCTGATAGCATGGTCTCCCATACATTTTCTGTGATAAAGAATGTTGGTAATCCAAGCAAAAGTTCCGATAGTAAGTTGGACACTGACTTTTCAGACAGCTGTCCTGTGCCAGATTTAATATGTAATGAGAAGCCTTCCATATCACCTTGTAGTGAGTTGTCAGAAAATGGCGACAATTCAACCGATCGTACCTCAATGTCTCCCAAACCTGAGAGTAATCAAGTTAGCCATAGTAACCTAGGAATTCCAGAAAAGAAAATTCAGCTTTCACAGAAGCCATACAGGCACAACACACTAAGACTGAACAATATTTTTGTGAAGAAGCACAAGAAAGTTTTGCAAATTAAGAATGCCAAGGCGTTTCCTGTGAACATCACAAAGAAAACTGAACAAAGAGACTCCATTCCGACATCATCTACTTGCAGGTCgccagaaaattttactatgaataAGCTGCACCAAACAGATAAGACAGAATGTAAGGAGAAGACCAATCTTTTGCAAACCATATCTGTGGAGGAGATTAAGGAGAATGATGACAATAATGACTTTGATGCTGACACATCTATGGACATAGAACCACTAGCATCTGCTGATTTGAATCAGCCTGAGTTTGCTGCAAATATTGATATGATTCAGGTGAAGGAGGAAATAAACTCAAGCAATGAAGGCGGGTTTAGTAACGAGCCAGTGACGACGGACCGCATGTTGACTCCACTAGAAACATTGCGACCTATTAATGTTATTAGCTACGGTAGTCTGTCCAATGAGGATTTTAACGAGGAGTCCAACGACAGGGAGTTACTGGACCTCGAAGCGGCGTCTAAGAACAAACAGTTTGTCACCATGATGAACGAGAATTATTTCGGCGACAATATTTACGCAGATTACTTTACTCCCGACCGCGTGGAGGCGTTCGACGCGGAGCGCGAGGCGGCGGGGTTCAAGGAGGGCGCTAAAGACGGTATGTACCTGTGGGGTGAGTCTTCACAGAAGGACAACGACTTTGTGCTGCCTAACTTTATACACGAGAGTTACAAAATAGCAGAGAGTAATGGGATAGATTATTCAGAGCTAGGTGCTAAAGAAGTGCAGGTGGACGTGGAGGTGGACGGGTGCGAGCGAGACAGCAAGGCGGACGTGCTGAGCGAGGGCCCCAGCGAGGGCGACGCGCCCATGAACATCTGCGCCGACGAGCGTATGCCGCCGCGCGGCGAGCTCAGCGAGCAGGAGAGCAACGGCGATATGGAGTCGCCCTGGAGCGGGATGTACACAGAGGTGACCCCCGCGGAGCCCTACGATCTAATTGCCCGGGAAAGCTGGGTGTCAGACGGGTCAGAAGTGGACGCGAGTGAGAAGCGGGAGCCCATCGAAGAGGACTTGCAGCTGCCACTGGCTCCACAACTGGCGCCACAACTGGCGCCAGTGTTCAGCCGGCCGCGCGTGCACACGTGCGCGGCGTGCGGCGCCACGTGCACGTCGCTGAAGGAGCTGCGCGCGCACAAGTCGCTGGTGCACGCTCTGCCCACTTGCTCGGCCAGCAAGACGTCCTACAGCAGGCTGGTTACAGCGCGAGCCATCAAAAAGGAAGAAAAACCAGATACAaACAACCTACTACCACCTATAGACTCTAAAGACTCGATATCGACGACGATCCTCCAAGTTTACGAGAGTATTCAAGTTGAGGAGGCTAAGCCGAAGATCGAGGTAGACCGGCTGATCAAGCAGGAGGTGAAGCGCAAACGGAAGGACTATGTGTGTCCGACGTGTAAGGTAGACCAGGGAACTGACGCGCAGTTCCACGCTCATCTGAAGACACATCCGCTGGAGTGTCTCACGTGCGGCAAGTGCTTCTTCAGGAGAGCCAACCTGTCTCTGCATATAAAGACACATTTaggaattaaaaattataaATGCGAGGTGTGCGAGAAACGTTTCGCGACGCGTCAGAAGCTGTCGGAGCACCACAACGTGCACACGGGCCGCGCGCCCGTCAAGTGCACCGTGTGCGACGACACCTTCCGCCGGTACTCCAACATGGTGCAGCACAGGGACCGTCACCACCTGTCCAAGCGCGCCAAGGTGCGCGACTACGTGTGCCAGTGCGGCCTGGTGTTCCACTCGCGCGCCAAGCTGCACTGGCACCAGGAGACGCACGCGGCCCGGCCGCGCGCCTGCCTGTACTGCAGCGACAAGTTCGTGCACGCGGCGTCGCTCACGCGCCACGTGCGACGCTCGCACAACGAGTACTTCTTGGCCGAGCGCCACAAGGGCAAGCAGGAGAACGTGCAGTGTCCCGTCTGCAAGCAGGTGTACCTGCGCTCGAacctgcgcacacacttgcagACACACAGCGGACAGCGGCCCTACATGTGCATCATCTGCAACAAGTCCTTCACCACCAAGTGGAACCTCAAGCTGCACCGCTGGACGCACGCGTCGCGCTCGGCCAAGCCCTACAAGTGCAGCCTGTGCAAGGGCGCCTTCATCCGCCAGACCGAGTACATCTCGCACATGAACGCGCACAAGTCCGTGCGGCCCTACACCTGCAACTACTGCGGCTGCCAGTTCATCCGCAAGTACAACTGCCAGCGCCACGTGCGCGAGCACGAGATGGCCAAGAAGTACGTGTGCAAGGTGGCCGAGTGCGGCAAGTCCTTCCACCGGAGCTACTACCTGTCGGAGCACATGAAGGTGCACAGCGGCGTGCGGCCCTTCGCCTGCAACATCTGCGGCAAGACGTCCAGCAACAAGTCCAACCACAACAAGCACGTGAAGATCCACCACGCGCGCGAGCCCGTCGCCACCGAGGCGTGA
Protein Sequence: MDQLVVQCPVCTLFLHNGITLESHLDTHPKDQVIKALCNIANKGSNYASRTSTPVHSERSYRSRSRTPATDDSAKWAGSRSNDHERYWRRTPSRTSKSTPVSNTSRNGTPDIRMLDVNFENHGIAGGGAGQHVNNPFHSKAEKLQQTFQCPPVPEYDPQFVYYPEQQEDREIKYSRSAEYNAMDNNMFSYNMPPMAGSGVKLLPGVPRKANDLVKVLPKPNNILLKTNMGGVQYIGPGAKPMHVMVPSAPTFIQKNLQNNMIMTSSVPNPQMHIDTKTTSPPLASNQLNQMTSGAFTPGTTVVTQNSQIIYREMVHNIDGKPFITTMPTVLGAHDNVSNLAQASSMYQNVMVVDQFGNTSCMYTTPQQMMNKACPTSIYNESGTLMPNAHIDKSVQNMTDPKTLIIEVGPLIAPTHENICEDPSSTVPLPVTSSPVGHTDIPIETVDPKYEMPGSTKGLKILSNIKVEVPVQHHKNMVNTVMDLTGPNETDYPVERVNSPDKILPDLEDNNQLSSDDTQPSSMSSADSMVSHTFSVIKNVGNPSKSSDSKLDTDFSDSCPVPDLICNEKPSISPCSELSENGDNSTDRTSMSPKPESNQVSHSNLGIPEKKIQLSQKPYRHNTLRLNNIFVKKHKKVLQIKNAKAFPVNITKKTEQRDSIPTSSTCRSPENFTMNKLHQTDKTECKEKTNLLQTISVEEIKENDDNNDFDADTSMDIEPLASADLNQPEFAANIDMIQVKEEINSSNEGGFSNEPVTTDRMLTPLETLRPINVISYGSLSNEDFNEESNDRELLDLEAASKNKQFVTMMNENYFGDNIYADYFTPDRVEAFDAEREAAGFKEGAKDGMYLWGESSQKDNDFVLPNFIHESYKIAESNGIDYSELGAKEVQVDVEVDGCERDSKADVLSEGPSEGDAPMNICADERMPPRGELSEQESNGDMESPWSGMYTEVTPAEPYDLIARESWVSDGSEVDASEKREPIEEDLQLPLAPQLAPQLAPVFSRPRVHTCAACGATCTSLKELRAHKSLVHALPTCSASKTSYSRLVTARAIKKEEKPDTNNLLPPIDSKDSISTTILQVYESIQVEEAKPKIEVDRLIKQEVKRKRKDYVCPTCKVDQGTDAQFHAHLKTHPLECLTCGKCFFRRANLSLHIKTHLGIKNYKCEVCEKRFATRQKLSEHHNVHTGRAPVKCTVCDDTFRRYSNMVQHRDRHHLSKRAKVRDYVCQCGLVFHSRAKLHWHQETHAARPRACLYCSDKFVHAASLTRHVRRSHNEYFLAERHKGKQENVQCPVCKQVYLRSNLRTHLQTHSGQRPYMCIICNKSFTTKWNLKLHRWTHASRSAKPYKCSLCKGAFIRQTEYISHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVAECGKSFHRSYYLSEHMKVHSGVRPFACNICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00908225;
90% Identity: iTF_01026666;
80% Identity: -