Basic Information

Insect: Gortyna flavago
Gene Symbol: -
Assembly: GCA_963669345.1
Location: OY770125.1:23108338-23123067[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00079 0.064 14.5 4.9 1 23 333 355 333 355 0.98

2 11 9e-05 0.0073 17.5 1.5 1 23 361 383 361 383 0.98

3 11 0.0001 0.0084 17.3 1.7 1 23 389 412 389 412 0.96

4 11 0.044 3.6 9.0 3.3 1 21 418 438 418 440 0.95

5 11 0.001 0.083 14.2 3.8 1 23 446 468 446 468 0.99

6 11 2.1e-05 0.0017 19.5 5.3 1 23 474 496 474 496 0.98

7 11 0.0048 0.39 12.0 0.9 1 23 504 527 504 527 0.97

8 11 0.026 2.1 9.7 4.3 2 23 534 555 533 555 0.96

9 11 4.7e-05 0.0038 18.4 2.8 1 23 561 583 561 583 0.99

10 11 5.2e-06 0.00042 21.4 1.6 1 23 589 612 589 612 0.96

11 11 4.4e-05 0.0036 18.4 6.0 1 23 626 648 626 648 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00079	0.064	14.5	4.9	1	23	333	355	333	355	0.98
2	11	9e-05	0.0073	17.5	1.5	1	23	361	383	361	383	0.98
3	11	0.0001	0.0084	17.3	1.7	1	23	389	412	389	412	0.96
4	11	0.044	3.6	9.0	3.3	1	21	418	438	418	440	0.95
5	11	0.001	0.083	14.2	3.8	1	23	446	468	446	468	0.99
6	11	2.1e-05	0.0017	19.5	5.3	1	23	474	496	474	496	0.98
7	11	0.0048	0.39	12.0	0.9	1	23	504	527	504	527	0.97
8	11	0.026	2.1	9.7	4.3	2	23	534	555	533	555	0.96
9	11	4.7e-05	0.0038	18.4	2.8	1	23	561	583	561	583	0.99
10	11	5.2e-06	0.00042	21.4	1.6	1	23	589	612	589	612	0.96
11	11	4.4e-05	0.0036	18.4	6.0	1	23	626	648	626	648	0.97

Sequence Information

Coding Sequence: ATGACTAAAAGCAGTAGCCAATCTAAAGCCTGGCCGCCAGGCCTACCTGTCCCAATTAAGGACGAGCCTCTGGAACTGTCGGCAGACCAGGAACACCTGGTTAGTGTCGACAGCAAGAACTACACAAAAGCGGACCCAGACATCATCACCTATAGGCAAGCTTTTTGGCACCAGAGCCAGGCGAGCCTGTCAAGCCCAAGCAGAGAGGAGGACTCAAACCCAAACCCTATCAATTACAATCAAGAGATTTGGAACGAGCCCGAAAGCCCAGGCAACGAGGAGAACTCACTCCCAGACCCCGGGGAAATAGTTGAAAAAACTCTTGAGAACGCACCCATCAAGAAGAACATTCATATAAAAGAGAATATCTGGATTTCTCcgaataagaaaataattgaaGAAGAGGAGGTAAGCCAGGAGTGCCTGGCTAGTCAAGATTGCGCGGAAAAAGATAACCTGAAAGAAGATAAAGAAAAACCAACCATGCCACTTCCAGATAAAAACGAGAAGAACAAGCAAACATACCAAGGATCGGTCATCGCAGTAAATGCCGCAACTGATGAAGAAGGATTGCCCGCGGGGATGGTCGAGTACTACGTAGATCAAGATGGCAAGTACTACTATCAATCGGCGGTCGAAGGAGACGACGTAGACATGGACAATTCCGAAGACAACCAAGAAACTGAGGAGGCGGTCGCTGAAGGTTCGGAACCGACACTGACCGATCAGGAGGAAACCTACCAGACGGTCACGTTGGTCCCTTCTGAGACTAATGGGGAGGTTAGCTACGTGCTGGTGGTGCAAGACGAGGCCAAGGGGGTCGTCAACATCGATCTCAAGATGGACCAGTCCGAAGCGGAGGAGAAAGGCAACGAAGACGTGTACACTTTCGAGGACGAGGAGGGCGGCGAGGAGGAGGAGGAAGAGGAAGAGGAGATTCCCGACGGCAGGCCCAAGACCACGCAAAAGCGAAGCCTCGCGCACATGCGTCCTAACTACAACTGCAACTTCTGCGACTACACCAGTCATCGCAGGTACCTTTTGCTGCGCCATATGAGGTCGCACTCGGAGGACCGTCCGCACAAGTGTACCGTGTGCGAGCGCGGGTTCAAGACCATGGCCTCTCTGCAGAACCACGTCAACATGCACAACGGCATCAAGCCGCACGTCTGCAAGTACTGCAACAGCCCTTTCACCACCTCGGGCGAGCTGGTCCGCCACGTGCGCTACAAGCACACGCACGAGAAGCCGCATAAGTGCACGGAGTGCGACTACGCCTCCGTCGAGCTGTCGAAGCTGCGCCGCCATGTCCGCTGCCACACCGGCGAGAGACCCTACCAGTGCCAGCACTGCACCTACGCATCCCCGGATACGTTCAAGCTGAAGCGCCACCTGCGCACGCATACGGGCGAGAAGCCCTACAAGTGCGAACACTGCAACATGTGTTTCACACAGTCGAACTCGCTGAAGGCCCACCGGCTCATCCACAACGTATCAGAGAAGCCGGTGTACTCGTGCGAGCTCTGCCCGGCAAAGTGTGGCCGTAAGACGGACCTGCGCATCCACGTGCAGAAGCTGCACACTTCCGACAAGCCGCTGAAGTGCCGCCGCTGTGGCAAGTCCTTCCCCGATCGCTACTCCTGCAAGGTGCACAACAAGACCCACGAGGGAGAGAAGTGCTACAAGTGCGACCTGTGCCCATACGCGTCAACCACGCAGCGCCATCTCAAGACGCACATGCTGAAGCACACCGATGAGAAGCCGTTCGTCTGCGACCTGTGTGATCAGTCATTCAGGCAGAAGCAGCTGCTTCGTCGCCACCAGAACCTGTACCACAACCCCAACTACGTGCCCAAGCCTCCGAAGGAGAAGACGCACTCTTGCCACGAGTGCCACCGCATGTTCGCCCACAAGGGCAACCTGATCCGCCACTTGGCCGTGCACGACCCGGAGTCTGGACACCACGAGCGCGCGCTTGCCCTCAAGATCGGGCGCCAGAGGAAGGTGCGATTCGTCGAGGGAGAGCCTATGCCTAATCTCCGAGTCCTGGACTCTGCCGACTCTGAGAACATGATTAAGCTGGGACTCACCAAGAACGATTTGAAACGCGGTGAGCTGGTGACTGTGGGCGATGGTGATGGCCAGCAGTATGTGGTGCTGGAGGTCATTCAACTGGAGGATGGCACTGAGCAGCAAGTCGCCGTCGTGGCTCCGGAGTACAATATGGACGAGGATGAAGCTGAAGAAGACGAGGAAGAGGAGGAAGAAGATGAGGACGAGGAAGACGAAGGCGAGGACAGGAGCTTTGTGGTGAAGGAGTCCACTGTTACCTCCACTAGCATCAAACTCGAAAAGGAGGTCGACACATGCTTTGGATTCGATGACGAGGAGGAAGAGGATCCCGAAGATGAGAATTACACAGACAAAGTTGTGCTGAGCCTAGTTTAG
Protein Sequence: MTKSSSQSKAWPPGLPVPIKDEPLELSADQEHLVSVDSKNYTKADPDIITYRQAFWHQSQASLSSPSREEDSNPNPINYNQEIWNEPESPGNEENSLPDPGEIVEKTLENAPIKKNIHIKENIWISPNKKIIEEEEVSQECLASQDCAEKDNLKEDKEKPTMPLPDKNEKNKQTYQGSVIAVNAATDEEGLPAGMVEYYVDQDGKYYYQSAVEGDDVDMDNSEDNQETEEAVAEGSEPTLTDQEETYQTVTLVPSETNGEVSYVLVVQDEAKGVVNIDLKMDQSEAEEKGNEDVYTFEDEEGGEEEEEEEEEIPDGRPKTTQKRSLAHMRPNYNCNFCDYTSHRRYLLLRHMRSHSEDRPHKCTVCERGFKTMASLQNHVNMHNGIKPHVCKYCNSPFTTSGELVRHVRYKHTHEKPHKCTECDYASVELSKLRRHVRCHTGERPYQCQHCTYASPDTFKLKRHLRTHTGEKPYKCEHCNMCFTQSNSLKAHRLIHNVSEKPVYSCELCPAKCGRKTDLRIHVQKLHTSDKPLKCRRCGKSFPDRYSCKVHNKTHEGEKCYKCDLCPYASTTQRHLKTHMLKHTDEKPFVCDLCDQSFRQKQLLRRHQNLYHNPNYVPKPPKEKTHSCHECHRMFAHKGNLIRHLAVHDPESGHHERALALKIGRQRKVRFVEGEPMPNLRVLDSADSENMIKLGLTKNDLKRGELVTVGDGDGQQYVVLEVIQLEDGTEQQVAVVAPEYNMDEDEAEEDEEEEEEDEDEEDEGEDRSFVVKESTVTSTSIKLEKEVDTCFGFDDEEEEDPEDENYTDKVVLSLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00123629;
90% Identity: iTF_01441333;
80% Identity: -