Basic Information

Insect: Gortyna flavago
Gene Symbol: -
Assembly: GCA_963669345.1
Location: OY770126.1:3047245-3049284[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.1e-10 5.9e-08 33.1 0.0 1 43 17 59 17 60 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.1e-10	5.9e-08	33.1	0.0	1	43	17	59	17	60	0.95

Sequence Information

Coding Sequence: atGCCTAACACATACAAACGCATATCTTTGGATCTTCGTGGTAAATGGACGGAGGACCAGTTACGATCTGCAATGAACGCTGTTCGGAACGACAACATTTCCGTACGTATGGCTGCAACCACATTCAGTATTCCCAGAAAAACATTAGAAAGGAGACTCAAATCTAACAATGACAAGAAAGGTAGCATGGGACCTTCTTGTGTTCTTGGCAACGATAATGAACTGCGCCTggttaaatacattaaaaagatGCAATCACATGGGTTTCCATTGACAATTGATGATGTTCGGAGTATTGCCTATCGATTTGCAATTCAACTCGGAATAAAGCACAAGTTTAATACCACTACTGAAAAAGCTGGCTATGACTGGCTAAGTAAGTTCTTAACTAGGAACCCCACTATATCACTAAGAAAGTCAGAAGGTGTTTCCTTAGCCAGAGCACAAGGCATGAATCACGTAGAGGTAAATAATTACTTTCAACTGATGGAAAATATCATGCAGGAGCATAATCTGTTTGACAAACcgggaaatatttttaatatggaTGAGACCGGCCTTCAACTCAACAATCGACCGAGTCACGTGCTTGCTGAGAAGGGGTCAAAAGCTGTATCAACTATCACCTCTACGGAAAAGGGTGAAACCATTACTGTCATTGCCTGTTGCAACGCAGAAGGTGTCTTCATACCCCCAGCAAGCATTATGAAAGGCAAAAGGAAGAAACCGGAATTCCAAGATGGTATGCCACCCGGCTCCTGTCTATTCATGTCGCAAAAGTCGGCATACATAAACTCAGAAATCTTCTTCGAATGGCTTAAAGATCATTTTTACCCACGAAAACCCTCAGGAAAAACATTATTACTCCTGGACGGTCATTCAACTCATTGTAATTCCGTTGAAATGCTAGAATTTGCCATCGCTCATGACATCATTCTTGTCTCTATGCCAAGTCACACTTCCCACTATTTGCAGCCGTTAGATAGAGCTGTTTTTAAATCACTGAAAAGCTACTTCTATGAAGCTTGCAGAATGTGGCTGAAGCGAAATCCTGGTCGTCGTATAACAAGACTGCAATTTGGCGAACTGCTTACTGAAGGTTGGGGCAAAGCGGCAACCCCACAAAATGCAATTTCAGCGTTTAAAGCAACGGGAGTATTCCCACTAAACCCTTCTGTAATACCCGAGTACGCATTTTCTTTGTCATCTGGCTCACACGACGAAAATCAACCCCCTTCAtctacaatgtcaaataatcaAACACCAGTTGCTCCTGTACCGTCAGTCAACCTGCTTAGCATCTCAAACAGCCCATTTATTACTTCAGCAACAAATATGGAACTGTCTAGCAACTCGCAAAGCCCACATGAATCAAACAATATGAAAGCTGTTCCTCCAGAATTATCAAGACCTGATACCTCGCAAGACTTGCTTGAAGACACTGCGCAACCCAGCACTTTAGTGGCATCCGAAGGCAATTCTAAAGAAACACTATCCAAGATATTATATGAGCTTAAACCTATTCCACTTCAAGTATCTCAGTTACGAAAGAGAGCTAAACAAGTTGGTATTTTGTTCACATCTCCTGTTCACctagaaaaaagaaaactaaaagaaaaagaaaaagtacaaaaagaagagaagaaagtaaaaataaaagttgaagGACGTCAAAAGTGTGCTAAATTACCATTCAAAAGAACCCAGAAAACCagtagaaaaagaaaattgcatgAAAACGTTGAATCAACATCTAGTAGCGAAGCTGAATTTATTCCGACCAGTGGCGAATCTGATTTGGATGGCTACAGTGACGATATTGATTGCAGAAACAACTGCAAAGGATGTGGAGAAAATTACTATGAAACTCAAAAAACGGAAGACTGGATACAATGCAACTTGTGCCACAATTGGCTGCATGAAAATTGCACAGAGTTTCCGGATATGTGCCACCCATGCGGCCGTAAGGACTTGGCATTACAACGAAATGCAGACTGCAATGAAAAAGGCAAGGGAAAGGGCAAGAAGACTGTGAAATAG
Protein Sequence: MPNTYKRISLDLRGKWTEDQLRSAMNAVRNDNISVRMAATTFSIPRKTLERRLKSNNDKKGSMGPSCVLGNDNELRLVKYIKKMQSHGFPLTIDDVRSIAYRFAIQLGIKHKFNTTTEKAGYDWLSKFLTRNPTISLRKSEGVSLARAQGMNHVEVNNYFQLMENIMQEHNLFDKPGNIFNMDETGLQLNNRPSHVLAEKGSKAVSTITSTEKGETITVIACCNAEGVFIPPASIMKGKRKKPEFQDGMPPGSCLFMSQKSAYINSEIFFEWLKDHFYPRKPSGKTLLLLDGHSTHCNSVEMLEFAIAHDIILVSMPSHTSHYLQPLDRAVFKSLKSYFYEACRMWLKRNPGRRITRLQFGELLTEGWGKAATPQNAISAFKATGVFPLNPSVIPEYAFSLSSGSHDENQPPSSTMSNNQTPVAPVPSVNLLSISNSPFITSATNMELSSNSQSPHESNNMKAVPPELSRPDTSQDLLEDTAQPSTLVASEGNSKETLSKILYELKPIPLQVSQLRKRAKQVGILFTSPVHLEKRKLKEKEKVQKEEKKVKIKVEGRQKCAKLPFKRTQKTSRKRKLHENVESTSSSEAEFIPTSGESDLDGYSDDIDCRNNCKGCGENYYETQKTEDWIQCNLCHNWLHENCTEFPDMCHPCGRKDLALQRNADCNEKGKGKGKKTVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -