Gacu020778.1
Basic Information
- Insect
- Gonocerus acuteangulatus
- Gene Symbol
- stc
- Assembly
- GCA_946811585.1
- Location
- CAMPFD010001078.1:323298-344605[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 2 6.7e+04 -4.3 1.6 15 18 290 293 289 294 0.75 2 17 1.9 6.5e+04 -4.1 1.6 15 19 317 321 316 321 0.81 3 17 0.015 5.1e+02 2.7 0.6 4 10 350 356 349 357 0.97 4 17 1.9e-05 0.62 12.0 17.5 4 19 364 379 362 379 0.94 5 17 1 3.4e+04 -3.2 0.6 5 10 404 409 404 409 0.92 6 17 1.8e-05 0.61 12.0 10.0 1 18 415 432 415 433 0.94 7 17 1.6 5.2e+04 -3.8 1.3 9 14 439 444 438 444 0.70 8 17 0.022 7.4e+02 2.2 1.6 6 12 462 468 461 468 0.89 9 17 1.5e-08 0.0005 21.9 12.8 1 18 472 489 472 490 0.98 10 17 1.1e-06 0.037 15.9 15.9 1 19 531 553 531 553 0.89 11 17 0.0097 3.2e+02 3.3 9.4 1 11 593 603 593 604 0.96 12 17 2 6.7e+04 -4.4 1.1 4 10 608 614 608 614 0.58 13 17 7.5e-11 2.5e-06 29.2 12.3 1 18 620 637 620 638 0.97 14 17 2 6.7e+04 -6.5 11.2 1 19 677 695 677 695 0.72 15 17 0.41 1.4e+04 -1.9 1.0 9 14 713 718 711 725 0.81 16 17 2.1e-07 0.0071 18.2 9.5 1 17 731 746 731 746 0.96 17 17 0.02 6.9e+02 2.2 15.6 1 18 762 781 762 782 0.81
Sequence Information
- Coding Sequence
- ATGTCGAACTGGGAGAGGAGCCAGGGAAGTGGAAGCTCTTATCAACAGGGTTTTGGTAATTTGTATCAAACTCAATCACAACCAGAAGCATCCCAGTTTTATGGGAATTACTACCAACATCCTTTCTACAATTCTTTGTTAAATGGTTCTCCTGAAGTATACAGAAATGGATATCAAGGGAGCTTTCAGTCTAATCCAACTTCTGCAGAGGAGTTCTTCAGGATGTATCAGGAACAGGAGCACATTCAGCAGCAAGATCATCATCAGCCACAGCAGCAGCAGCAACAGCAACAGCCTAATCAGAACCTTGATTACGATTCTTTGGGCCAGAATTATCGAATTCCCACAATGGTTTTTCCATCATCAAATACTAATGCAGggggCGGAGAAGTAAATCAAGTGAAGAGAAAGACTTATGAGCCTAATAGAGGTGGGAGTGGGCGATTTGGAAATCGGAACTTTGGTGCAGTGCCTAAACAGCCTACAGGAggaaattacaataaaaagaGTAATTACAACAAGAAATTTAATCAGCAACAAAGCCAGCAGAATCAACAAACATGGGCTGCCATTCCAAATGATGACATCACTGGGCCTAAAGGTGGAGAAGGTGAGGGGAAACAACATGGGAGTAAGCGTGGTAAACAGCATGGATATGCTCAGCGAAATACCAACAGATATAATAATTACCAGAGAGACAGCAATGGTATGGTGAAAAATTCCTACGTTAAGGACTGGCGGGCTAAGGGCAAGGGAAGTGGAAATGAAGAGTGTCAGCGAGACCGTTTGACATCTCAATTATACTCTGGTGCTCTAGAATGTTTGGTTTGCTGTGAGCGAATGCGTCAGGCAGATCCTGTTTGGTCATGCCCTGCATGTCATCATGTTCTTCATCTTCGATGTACAGTCAGATGGGCTTCTTCTTCTAGAGCTGATAACGGTTGGAGATGCCCTGCATGTCAAAATGTTACTGAGGCTATACCTACAGAATATAAATGCATGTGTGGAAAAGTGACCAATCCTCAATGGGTACGAGGTGAGACCCCTCACACTTGTGGGCAGGTATGTAGTAAAGATCGGGGCTGTCCACATCCATGCACACTTCTCTGCCATCCGGGTCCTTGTCCTCCATGTTCTGCGAATATTGACAgGTACTGTGGCTGTGGTCGAACTAAACAAGTCGTCCAGTGTTCATCTAAAGTGGAACTGACATGTGAAGCTATGTGTGATAAAACCTTAAATTGTAATAAGCACAGTTGTATTAAAGGTTGCCATTCAGGAGCCTGTGATGCTTGTGATAAAACAATCCACCAACgttgTCATTGTGGAAATCAGGAACGTGATGTGCCTTGTGACGGAAGTGAATCGGGAATTAACTACAGCTGTGATAAGCCCTGTCATAAACTACTTACCTGTGGTGACCACAAATGTACAAATTTATGTCATCCTGGTTCCTGCCAAGAATGTGTCCTTTCACCTGAAGCTGTTCAAACATGCCCTTGTGGGAAGACTCGGATACCTCCTGGAACTCGAAAGTCCTGCAAGGACCCTATTCCACTGTGTGGCGCTATCTGCGGAAAGCTGCTTGCTTGTGgacagccagGCAAAAGACATACTTGTGCTGGCAAATGCCATAATGGGGACTGCCCACCTTGTCCTGAAACAACATCAGTAATGTGCCGTTGTGGTGCCATGGCCAAAGAAGTGCAATGTGCAGTATTGGAATCCAGACCAGATGATGCCCGTTGTTCCAAGCGATGTACTAAgAGAAGAAGTTGTGGCAAACATAAGTGTAACCAGAATTGCTGCATTGAGATTGACCACTTTTGTCCTCTTCCTTGCAACAAAATGCTTTCTTGTGGTAGACATCGCTGTCAAGAGCTCTGCCATCGAGGAAATTGTCGCCCCTGTCTGGCTGCAAGTTTTACTGAGTTAAGTTGTGAATGTGGAAAATCTGTACTATTACCTCCCGTACCTTGCGGAACGAAACCCCCTGAATGCACTGCACCATGTTCTCGTGCACATCCTTGTGGCCATGCTCCAACTCATTATTGTCACTCTTTGCCTGATTGCCCTCCTTGTTCTGTACTTACAACAAAGTACTGCTTTGGTGCTCATGAACTTCGGAAAACAGTTCCTTGTCATATGGGTGAATTTTCATGTGGACGTGCGTGCAATAAGCCTTTGGATTGTGGTCACTCCTGTATCAGACTTTGCCATTCAGGCCCATGTACACCAGAAGGGTCTCATTGTACTCAAGGTTGTCCTACTTCTCGGCCATCTTGCGGTCACCCTTGTGCCGCGCCTTGTCATCCAGGAACTCCTTGTGTACCTCAGCCATGCCAAGCGAAGGTTGAAGTAAGATGTGAATGTCGGAGGAGAGTTGTTACAAGAAGTTGCTCAGAGAACACCTCAGAATACCAGCGTCTTGCCACAGCTCAACTTGCATCACAAATGGCTGATGTTCGTCTTGGAAAAACAGTCGAACTTAGATCAACTTCTAACAAACCCATTCttaaGCTCGAGTGCACTGATGAATGTAAATTAGCTGAAAGAAACCTGCGTTTAGCTATTGGCCTTCAGATCTCAAATCCAGATCTATCGTCCAAGCTTTCCCCCCGTTATTCACAGTTTCTTTTATCCTGGGCTAAGAGGGATCCTAAATTTGCACAGAACGTTCATGATAAACTAACTGAAGTTGTACAGCTGGCAAAAACGTCCAAACAAAAAAGCAGAAGTTATTCCTTCCCTTCCATGAAGTCTGAAAAGCGGCAATTCATTCATGAGTATAGTGACCACTTTGGCGTTGAAAGTGTTGCATACGATGCTGAACCAAACAGGAATGTTGTGGCCACTGCATATAGAGACAAGtcCTGGCTGCCGAGCTACTCAGTTCTTGAAATGCTAGAACGAGCTGCGGGTAAAAGAAAAGTTCCTTCTTTACTTCCATCATTGAAAAAGGATAGCAAAGAGGAGAGTGTGATGCTTCCTGTAAGACTTCGCCCTAAGTCTGAAGAACTAAAACAAGATGAAGCTAAAACAGATGAACCACCGCCTATAGACTACTTTGACTATGTCAATCCCTCTTAG
- Protein Sequence
- MSNWERSQGSGSSYQQGFGNLYQTQSQPEASQFYGNYYQHPFYNSLLNGSPEVYRNGYQGSFQSNPTSAEEFFRMYQEQEHIQQQDHHQPQQQQQQQQPNQNLDYDSLGQNYRIPTMVFPSSNTNAGGGEVNQVKRKTYEPNRGGSGRFGNRNFGAVPKQPTGGNYNKKSNYNKKFNQQQSQQNQQTWAAIPNDDITGPKGGEGEGKQHGSKRGKQHGYAQRNTNRYNNYQRDSNGMVKNSYVKDWRAKGKGSGNEECQRDRLTSQLYSGALECLVCCERMRQADPVWSCPACHHVLHLRCTVRWASSSRADNGWRCPACQNVTEAIPTEYKCMCGKVTNPQWVRGETPHTCGQVCSKDRGCPHPCTLLCHPGPCPPCSANIDRYCGCGRTKQVVQCSSKVELTCEAMCDKTLNCNKHSCIKGCHSGACDACDKTIHQRCHCGNQERDVPCDGSESGINYSCDKPCHKLLTCGDHKCTNLCHPGSCQECVLSPEAVQTCPCGKTRIPPGTRKSCKDPIPLCGAICGKLLACGQPGKRHTCAGKCHNGDCPPCPETTSVMCRCGAMAKEVQCAVLESRPDDARCSKRCTKRRSCGKHKCNQNCCIEIDHFCPLPCNKMLSCGRHRCQELCHRGNCRPCLAASFTELSCECGKSVLLPPVPCGTKPPECTAPCSRAHPCGHAPTHYCHSLPDCPPCSVLTTKYCFGAHELRKTVPCHMGEFSCGRACNKPLDCGHSCIRLCHSGPCTPEGSHCTQGCPTSRPSCGHPCAAPCHPGTPCVPQPCQAKVEVRCECRRRVVTRSCSENTSEYQRLATAQLASQMADVRLGKTVELRSTSNKPILKLECTDECKLAERNLRLAIGLQISNPDLSSKLSPRYSQFLLSWAKRDPKFAQNVHDKLTEVVQLAKTSKQKSRSYSFPSMKSEKRQFIHEYSDHFGVESVAYDAEPNRNVVATAYRDKSWLPSYSVLEMLERAAGKRKVPSLLPSLKKDSKEESVMLPVRLRPKSEELKQDEAKTDEPPPIDYFDYVNPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -