Basic Information

Insect: Gonocerus acuteangulatus
Gene Symbol: -
Assembly: GCA_946811585.1
Location: CAMPFD010000967.1:92055-93626[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.16 34 7.0 0.1 4 21 40 57 40 58 0.92

2 16 0.029 6.1 9.3 4.9 2 23 93 115 92 115 0.95

3 16 0.00043 0.089 15.1 0.4 1 23 121 144 121 144 0.97

4 16 0.013 2.8 10.4 3.5 1 23 150 173 150 173 0.95

5 16 0.00038 0.078 15.3 3.9 1 23 179 202 179 202 0.97

6 16 0.0047 0.98 11.8 4.0 1 21 208 228 208 231 0.94

7 16 0.11 22 7.6 5.1 1 23 237 260 237 260 0.96

8 16 0.0003 0.062 15.6 2.8 1 23 266 289 266 289 0.95

9 16 0.00019 0.04 16.2 2.9 1 23 295 318 295 318 0.97

10 16 0.61 1.3e+02 5.2 0.1 1 17 324 340 324 341 0.81

11 16 0.006 1.3 11.5 4.7 1 23 353 376 353 376 0.97

12 16 0.0029 0.59 12.5 3.0 1 23 382 405 382 405 0.95

13 16 0.00075 0.16 14.3 2.8 1 23 411 434 411 434 0.95

14 16 0.034 7.2 9.1 3.0 1 21 440 460 440 463 0.94

15 16 0.0016 0.34 13.3 2.7 1 23 469 492 469 492 0.95

16 16 0.14 29 7.2 3.0 1 23 498 521 498 521 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.16	34	7.0	0.1	4	21	40	57	40	58	0.92
2	16	0.029	6.1	9.3	4.9	2	23	93	115	92	115	0.95
3	16	0.00043	0.089	15.1	0.4	1	23	121	144	121	144	0.97
4	16	0.013	2.8	10.4	3.5	1	23	150	173	150	173	0.95
5	16	0.00038	0.078	15.3	3.9	1	23	179	202	179	202	0.97
6	16	0.0047	0.98	11.8	4.0	1	21	208	228	208	231	0.94
7	16	0.11	22	7.6	5.1	1	23	237	260	237	260	0.96
8	16	0.0003	0.062	15.6	2.8	1	23	266	289	266	289	0.95
9	16	0.00019	0.04	16.2	2.9	1	23	295	318	295	318	0.97
10	16	0.61	1.3e+02	5.2	0.1	1	17	324	340	324	341	0.81
11	16	0.006	1.3	11.5	4.7	1	23	353	376	353	376	0.97
12	16	0.0029	0.59	12.5	3.0	1	23	382	405	382	405	0.95
13	16	0.00075	0.16	14.3	2.8	1	23	411	434	411	434	0.95
14	16	0.034	7.2	9.1	3.0	1	21	440	460	440	463	0.94
15	16	0.0016	0.34	13.3	2.7	1	23	469	492	469	492	0.95
16	16	0.14	29	7.2	3.0	1	23	498	521	498	521	0.95

Sequence Information

Coding Sequence: ATGCACACAGCACTTACGATTCTTTTGTCCTGTATTTCAGATTTTGCTTCATCAGAAGCTGGAAAAGGAACTCAAAAAGAACTATTCGATATTGCCCAACTCAATCCTCTCTTCTTTCCAGATTGTGACGAAAGAACTGATACATCTCATACTTTAAAGGATCATATCAGTTCCAATTATACTAAAGAAAGACCTCATGCTTGTCCTCATAGAGCAGTTTGCTCTTGCAATTTAAAGTGTCACACCATGAAGAAACATATTACTGAGAAACAGCAATCCTGCCCACATTGTAACCATAAAGCTGTTACATCTCATAGTTTAAAGGAGCACATCATGTACAAACATTCTTATGATAAGCCTTATTCCTGCGCACAGTGTGATTATAAAGCAGTTAACTCTGGCACATTAAAGCGCCACATCATGAGTAAACATACTAATGAGAGGCCTCATTTCTGTGCACATTGTAACTATAGAGCTGTTAGGTCTGTActcttaaaaaaacatattatgaGCAAACATGATAATGAGAGACCTCATTCCTGCCCACATTGTGATTATAGAACTGTTTACTCTAACACATTAAAGGTCCACATCAGGAGCAAACATTCTAATGACAAACCTCATTCCTGCccacattgtgactatagaGCTGTTAGGCTCGACTCTTTAAAGAGACATATTATGTGCAAACATACTAATGAGAAACCTCATTCCTGTCAACGTTGTGATTATAGAACATTTTACTATAACACATTAAAGGTCCACATCAGGAGGAAACATTCTAATGAGAAACCTCATTCCTGCCCACATTGTGACTATAGGGCTGTTAGGCTTGACTCTTTAAAGAGACATATTATGTACAAACATACTAATGAGAAACCTCATTCCTGTCCCCATTGTGATTATAGAGCAGTTTACTCTAGCACATTAAAGGTCCACATCAGGAGCAAACATTCTAATGAGAAACCTCATTCCTGCccacattgtgactatagaGCTGTTAGGGTTGACTATttaaagatatatattatgAGCAAACATGATAATGAGGGTTCTCATTCCTGTCCACATTGTGATTATAGAGCAGTTTACTGTAGCGCATTAAAGGTCCACGTCAGGAGGAAACATTCTAATGAGAAACCTCATTCCTGCccacattgtgactatagaGCTTTTAGGCTTGACTATTTAAAGATACATATTATGAGCAAACATGATAATGAGAGACCTCATTCCTGCCCACATTGTGATTATAGAACTGTTTACTCTAGCGCATTAAAGGTCCATGTCAGCAGGAAACATTCTAATGAGAAACCTCATTCCTGCccacattgtgactatagaGCTGGTAGGCTTGACTCTTTAAAGATACATATTATGTGCAAACATACTAATGAGAAACCTCATTCCTGTCCCCATTGTGATTATAGAGCAGTTTACTCTAGCAAATTAAACCGCCATGTCATAAGTAAACATACTAATGAGAAACCACATTCCTGCCCACATTGTGCCTATAGAGCTGTTAAACCTGAGACTTTAAAGCTTCATATCATGCACAAACATACTAATTAG
Protein Sequence: MHTALTILLSCISDFASSEAGKGTQKELFDIAQLNPLFFPDCDERTDTSHTLKDHISSNYTKERPHACPHRAVCSCNLKCHTMKKHITEKQQSCPHCNHKAVTSHSLKEHIMYKHSYDKPYSCAQCDYKAVNSGTLKRHIMSKHTNERPHFCAHCNYRAVRSVLLKKHIMSKHDNERPHSCPHCDYRTVYSNTLKVHIRSKHSNDKPHSCPHCDYRAVRLDSLKRHIMCKHTNEKPHSCQRCDYRTFYYNTLKVHIRRKHSNEKPHSCPHCDYRAVRLDSLKRHIMYKHTNEKPHSCPHCDYRAVYSSTLKVHIRSKHSNEKPHSCPHCDYRAVRVDYLKIYIMSKHDNEGSHSCPHCDYRAVYCSALKVHVRRKHSNEKPHSCPHCDYRAFRLDYLKIHIMSKHDNERPHSCPHCDYRTVYSSALKVHVSRKHSNEKPHSCPHCDYRAGRLDSLKIHIMCKHTNEKPHSCPHCDYRAVYSSKLNRHVISKHTNEKPHSCPHCAYRAVKPETLKLHIMHKHTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00757523;
90% Identity: -
80% Identity: -