Basic Information

Insect: Gonocerus acuteangulatus
Gene Symbol: pol
Assembly: GCA_946811585.1
Location: CAMPFD010000870.1:206336-219444[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.021 4.3 9.8 4.1 1 23 99 122 99 122 0.92

2 16 0.0038 0.8 12.1 6.3 1 23 128 151 128 151 0.95

3 16 0.0032 0.67 12.3 6.5 1 23 166 189 166 189 0.93

4 16 0.6 1.2e+02 5.2 1.2 1 23 195 218 195 218 0.91

5 16 3.4 7.1e+02 2.8 0.3 7 23 389 406 383 406 0.76

6 16 0.0012 0.25 13.7 1.7 1 23 412 435 412 435 0.93

7 16 0.00011 0.024 16.9 3.2 1 23 559 582 559 582 0.93

8 16 0.11 22 7.5 5.5 1 23 588 611 588 611 0.96

9 16 0.0075 1.6 11.2 3.7 1 23 888 911 888 911 0.92

10 16 0.00026 0.055 15.8 1.1 3 23 919 940 917 940 0.96

11 16 0.0044 0.92 11.9 6.1 1 23 1087 1110 1087 1110 0.92

12 16 0.0022 0.46 12.8 1.1 3 23 1118 1139 1116 1139 0.96

13 16 0.023 4.8 9.7 1.2 1 23 1280 1303 1280 1303 0.91

14 16 0.0019 0.4 13.1 0.9 3 23 1311 1332 1309 1332 0.95

15 16 0.002 0.42 13.0 3.4 1 23 1476 1499 1476 1499 0.93

16 16 0.0013 0.28 13.5 4.7 1 23 1505 1528 1505 1528 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.021	4.3	9.8	4.1	1	23	99	122	99	122	0.92
2	16	0.0038	0.8	12.1	6.3	1	23	128	151	128	151	0.95
3	16	0.0032	0.67	12.3	6.5	1	23	166	189	166	189	0.93
4	16	0.6	1.2e+02	5.2	1.2	1	23	195	218	195	218	0.91
5	16	3.4	7.1e+02	2.8	0.3	7	23	389	406	383	406	0.76
6	16	0.0012	0.25	13.7	1.7	1	23	412	435	412	435	0.93
7	16	0.00011	0.024	16.9	3.2	1	23	559	582	559	582	0.93
8	16	0.11	22	7.5	5.5	1	23	588	611	588	611	0.96
9	16	0.0075	1.6	11.2	3.7	1	23	888	911	888	911	0.92
10	16	0.00026	0.055	15.8	1.1	3	23	919	940	917	940	0.96
11	16	0.0044	0.92	11.9	6.1	1	23	1087	1110	1087	1110	0.92
12	16	0.0022	0.46	12.8	1.1	3	23	1118	1139	1116	1139	0.96
13	16	0.023	4.8	9.7	1.2	1	23	1280	1303	1280	1303	0.91
14	16	0.0019	0.4	13.1	0.9	3	23	1311	1332	1309	1332	0.95
15	16	0.002	0.42	13.0	3.4	1	23	1476	1499	1476	1499	0.93
16	16	0.0013	0.28	13.5	4.7	1	23	1505	1528	1505	1528	0.96

Sequence Information

Coding Sequence: ATGCATctcattaCTGAAGACGAATGCACTTCTATGTGGATCCCTGACCTATCTTCAGAACTCAATTGTACAGAAAAGAATGACATTAATTCAAACTTTACGAGAAATAATGAATTTGTTGGAGAAGATTCCTCAAGGTATGCTGATGAAAAGCACCTTCAGTCGTCTTTTGAAACCATTGAGCATGGCAACGTTAGTGGAGAACCAATTATTTATCCTTACTGtcaatataaaagtaaaaattctTCCTTCCCGAGGTCTCGCATCTTGAGTAAGCACTGCAAATATAAACCTTTCTCATGTCCTTTTTGCAACTACCGTTGCAATCAAACAAATAACTTGAAATCTCATATTGCATTCAAGCATTCATTTGAAAAACCGTTTCATTGCAGTCATTGCTCTTATCGGAGTTCTCAATCAAGCAATTTGACTCGACATGTAAAGCTAAGGCATTTTAAAGACAAAAGCCAGTTGAAATctgcaaagaaaaaaacatttgtttgcCCACACTGTCATTATAGATGTGCCCAATTAAGCAATTTGAAATCACATATAACCTTCAAACATTCTAAAATTAAGCTACATGCCTGCCCATTTTGTATCTATAAAACCCCTCTATCAAGTAACTTGAGAAGGCATATAACATTGAAACATTCCTTGCAGAGGCTTAACCAAAAAGATTTCTCTTCTTGTTCTGGAATTGGAGAGTTTGGTCAATCACATCTGTTCAATAAGCAATTCTTAGATTCTGATTCTGAGAATGGACATTCTATAGCAAACGAAAACAATTATGCAAATTATGACAAACCTGAATTGATGACTTCTAACTCTCAGGCAGCTTCTTTTAGCAATCAAAAGTCTTTTTTAAGTGTCTCAAAGCAACTACTCCAAATTGTTTCTGTACCCTCTGACCAAAACACCGACCAATCACAAAATTCATCAGAACGTGATCATTCCAGTTCCATTCCAAGAAAATCATCTTTTGATCTTGTTCAAAACCAAATATTTGGTATTAATGCTACAGGGCAGTTctcaaaacatataaataatttccccACAAATAATGAAGTTCAACAGCATTCTTCATTACCTTCCTCTAATATTGGAGAAATATACCCCCAGTCTCTTAGTTCTATTGATGAGCCGTTTCAATGCCCATACTATGAGCAAAAATGCTCACAGTCAGTCAATTTGAAATCACATATTGCACTTATGCACTCTAAGAATAAACCATTTTCTTGCCCTCACTGTCCATACCAAAGCTCCATGTCCAGTAATCTTAATAGGCATGTCACCCTTAAGCATTATGACATTTTGAGTTCATTCAGACAAACTGACTTCAAAAAGCAAACTTCCACAAATAGTGGTCCTGATCAGCCTTTTAATGGATTAAAACCTGCATATCTTGCTGACAACATACAGAATTTTCAAATCAATGAGGATTGTACATTGAATGGAAGAAGTAATTCTACTTTGAACATTGGCAATGCAGTTTTTCCTTCAAATCCCTTAGTAGATAGTAGTAACAAATATGATTTTGTTAAAAGTCAAAACAATTCTGACATATTTGATAGAAAGGATACCTTTAGTAAGCATAAGATGACACCTGTAAATATTGATGACACTCAAAGCCATTCACCGTACAGTCACACTCTAGAATCTAATGAGAAACATTTTCAGTGCCCGTACTGCAATTACAAATGCTCATCATCTGGGAATTTGAAATCTCATATTGCTTTTAAACACACTAAAATTAAACCTTTTTGTTGCCCTTACTGTTCATATAGAAGTTGTGTTACAAGCAACGTCAATAGACATATTAGGTTGAAACATTGTGGTATTGACACATTTTCAAACCTAAGAGAACATGAAAAAACTATCTCAAATTGTGCGAGTCTACAGATAAATGAATCAAATGACCTCTGTGAGTCTTCGTTTTTACGTCCTCGTGAGGAGCAGCGTACCGAAAGATTCTCTTTGAATGAGGCGCTTGAGCCCTCTTGTCCTGAAAATATTTCTACGTTTACTTGCATAGACCCTCAAAGTCAGTCCACTGGTGGGCAGCAATGGGAATCAAACCTAATTAGACCAATTCCTTCAATATTTAATGATGATTGGGGCTCTTGCATATCGCTTGAAAAAACACACTTAGAGCAGAAATTGTTCTCTGAAAGTATTATGAGTGACAGTAAATACAGAAGTTTGGAGCCCACATTTAACAAAGAATCTAAAATCCATATATCCCTCGATAAGTACAATTGTGGTAAGGAAGGTTTTTCAAAAGCTCAAACTTTGTCTAAATATTCTGATGAATTTTCCTCACTTCATAGTCCTCCACAAATAAATTCAGAAACGCAAGTGCTATGCACTCCACAGTGTACAACACTTCCTCAGGACGAAGAATTAGACATCTCTTGTTCTGTCATTTTAAACCAATCAATGTCTTCTTTGAACCAAATCTCTACTCTTCAAAATTCTTGTAATGAAATCAAATCATTATCATGTCTAGACTCATCTCTTTCTGTGGATAGCCAAAATTTAAAGTCTTGCAGTATAAAAGTTGAAAACCACATCAGTGAATTTTCAAGCTCAGATGTGATTGAAACATCTTTAGAGCAGCAAAACATTGACAGCCATCAAAGTAATTTTAGTGAGAAGCCATATCATTGTCCTCACTGTAAATACCAAAGTTCTCAATCTGGCAATCTAAAGATGCATATTGCTTTCAGACACTCCAAAGTTAAACCTTTCGGTTGTCCTTACTGCAATTATCGCAGCTCTCAATCCAGTAATGTTAGAAGGCATTTGAGACTCAGGCATAATCCATTTCATTCTATAAAGACTTTTGtatcaaataatataaattatcaaaagATTACTGATAACAGTAATGGCAAAAGTGGCTCTCTAATCGAATCAAGTCAATATAATTCAGGAATGAATCGTCCACTGGTAAATTCAATTCAAGGTGTTTATGCAAAAAACTTTGTTAATGACCAATCAAACTCTTTAACTCACGAAATACTTAATGAGGATCCCATTAGTTCATTCATTTCAGAAGTCAATGAGAGTTTAATCTCTCAGCCTGAGGAGATGAAATCTGAATCAACTAGTTATGAAAGTGGAAATGAGGAAGGTAAGATGAATGATTTGCCTCCAAATATGGGAAATCCCTTGGGCACTGCCTACGAGGATGAAATCATTAAAAACAATTCCAAAAGGAGAAGATCTGATTATAAACGTAGCTGTATAAGGATGTATCATTGTCCACACTGTGAGCACAAGACGACTCAGTCAAGTAATTTGAAGACTCACATTGCTTTTAGACATTCTAAAATTATGCCATTTGGCTGCCCTTTTTGTAACTATCGTAGTTCGCAATCCAGTAATGTAAAGAGGCATGTCAGATTAAGGCATCAATTTGACAATTGTGCTGGATTATCTGCTCCTTTTTTCAATCATTCAAATACTGAAATGCCCTTAAGAGAGACTGATGACAGTCAAAACTCATTATCTCAATCCCCGGCATCCCAAAATTCGCCGGTAAAGCCGTGTTTTAATATAAAGGAATGTAATAATCCCTACAGTGATTCTGTAAGCTATGTAAAAAAAGAGGTCAGCACAACAAAttctaatgaaataattttttctgaaaatgaaaGTAACCAATTGAAAAAGATGAAGAGCAAAGTTGATGATAGCACTTGCTCTAATAGTGAACAGAGTAACATGTTACAAACGGAGAATTTTTCAATTGTGAAGAAGTGTTTTGAGGAAAGTTCCACTTCATCCCTAACCAACTCGACATTTGAATCCACAGACTTGAAAGAAAAACTTTATCAATGTCCTTACTGTGATCACAAGACACTGCAGCCAATTAATTTGAAGACTCACATTGCTTTTAGACATTTAAAAGTCAAGCCATTTGGCTGCCCTTATTGTAACTATCGTAGTGCCCAATCCAGTAACGTCAAGAGACATGTCAGATTTAGACATCAAATAGATAATTTTGTTGGGTTTTCTGCTTCCTCTTTTAGTCAATCAAATAACCTAAATGTTTTTAGGGATGTTGAGGACAGTCAAAACTCAGCATCCGATTCCTTGCAATCCCAAAATTTGCTCTCAAACCCAAGCTTTAATTTAGAGAAACCTTTTGCGTCCATCGGTGAATCATCAAGCATAATTAAAAAAGAATCGAACACCACGGATTCAGTCGAATTCGTTTCTTCAGAGCCTTCTGCAAGTCTAAGCAGCCAGTTAGACAATGTTAAGGGTGAACCAGATGATAGCTCTTGCTCTAATAATCAACAGAGTGTAAAGTTTCAAAATTTAGAGAATCTTtcaaacataaaatacattGACAAAAATGCCCTTTCATCTGTAATTGAACCCTCATTTGAATACTCAAACTTGAAAGATAAACCATACCAATGTCCGCACTGTGATCACAAGACACAGCAGCCAAATAATTTAAAGACTCATATTGCTTTTAGACATTCAAAAGTCAAACCTTTTAGCTGTACCTACTGCCATTATAGAAGTTCTCAGTCTAGTAATGTTAAAAGGCATGTTAGGCTGAAACATTCCCTTGAACTTAGTGCACCAGTATTTAGGACATATACAGCTATACAAACTGCAGCTCATACAGATGAATGTAGTGGCTCTGGCACACAAATAAAAACTGAAATGGCAACTCCTTCCCAAGATGATGTATATTTGCTTggagaaaatgaaatgaatgtGTCAAGAAGTGTAGATTCAAACCTTTTGTTGGAAAGGTGCGGGTGGGTTCACGACGGCACGTTACGGAAAAAATTGCAAGTTGGAGCCATCGATTCTGAGAAGGCAAATTGGAGCGATCTCAAAGACGTCTTCACTGATGTGTTTTACCAGGAGGGAGAGCCCTTAGGAGTAACCGGAAAGACCCGCCATGAGATCGTTCTTAGCTCAGACTGCACAGTTTATGTGAAGGAGAGACGATATCCTCAGGCCTTAAAAACCGCCATGCGGGAAGAACTTCAAAAGATGATTGATCAGGGGATCATAGTTCCGAGCAAGTCAACCTATAATAGCCCACTGTGGGGGGAGCCTACGGCGGGATCCCCGGGGAAGTACAGAGTAGTTAAATGA
Protein Sequence: MHLITEDECTSMWIPDLSSELNCTEKNDINSNFTRNNEFVGEDSSRYADEKHLQSSFETIEHGNVSGEPIIYPYCQYKSKNSSFPRSRILSKHCKYKPFSCPFCNYRCNQTNNLKSHIAFKHSFEKPFHCSHCSYRSSQSSNLTRHVKLRHFKDKSQLKSAKKKTFVCPHCHYRCAQLSNLKSHITFKHSKIKLHACPFCIYKTPLSSNLRRHITLKHSLQRLNQKDFSSCSGIGEFGQSHLFNKQFLDSDSENGHSIANENNYANYDKPELMTSNSQAASFSNQKSFLSVSKQLLQIVSVPSDQNTDQSQNSSERDHSSSIPRKSSFDLVQNQIFGINATGQFSKHINNFPTNNEVQQHSSLPSSNIGEIYPQSLSSIDEPFQCPYYEQKCSQSVNLKSHIALMHSKNKPFSCPHCPYQSSMSSNLNRHVTLKHYDILSSFRQTDFKKQTSTNSGPDQPFNGLKPAYLADNIQNFQINEDCTLNGRSNSTLNIGNAVFPSNPLVDSSNKYDFVKSQNNSDIFDRKDTFSKHKMTPVNIDDTQSHSPYSHTLESNEKHFQCPYCNYKCSSSGNLKSHIAFKHTKIKPFCCPYCSYRSCVTSNVNRHIRLKHCGIDTFSNLREHEKTISNCASLQINESNDLCESSFLRPREEQRTERFSLNEALEPSCPENISTFTCIDPQSQSTGGQQWESNLIRPIPSIFNDDWGSCISLEKTHLEQKLFSESIMSDSKYRSLEPTFNKESKIHISLDKYNCGKEGFSKAQTLSKYSDEFSSLHSPPQINSETQVLCTPQCTTLPQDEELDISCSVILNQSMSSLNQISTLQNSCNEIKSLSCLDSSLSVDSQNLKSCSIKVENHISEFSSSDVIETSLEQQNIDSHQSNFSEKPYHCPHCKYQSSQSGNLKMHIAFRHSKVKPFGCPYCNYRSSQSSNVRRHLRLRHNPFHSIKTFVSNNINYQKITDNSNGKSGSLIESSQYNSGMNRPLVNSIQGVYAKNFVNDQSNSLTHEILNEDPISSFISEVNESLISQPEEMKSESTSYESGNEEGKMNDLPPNMGNPLGTAYEDEIIKNNSKRRRSDYKRSCIRMYHCPHCEHKTTQSSNLKTHIAFRHSKIMPFGCPFCNYRSSQSSNVKRHVRLRHQFDNCAGLSAPFFNHSNTEMPLRETDDSQNSLSQSPASQNSPVKPCFNIKECNNPYSDSVSYVKKEVSTTNSNEIIFSENESNQLKKMKSKVDDSTCSNSEQSNMLQTENFSIVKKCFEESSTSSLTNSTFESTDLKEKLYQCPYCDHKTLQPINLKTHIAFRHLKVKPFGCPYCNYRSAQSSNVKRHVRFRHQIDNFVGFSASSFSQSNNLNVFRDVEDSQNSASDSLQSQNLLSNPSFNLEKPFASIGESSSIIKKESNTTDSVEFVSSEPSASLSSQLDNVKGEPDDSSCSNNQQSVKFQNLENLSNIKYIDKNALSSVIEPSFEYSNLKDKPYQCPHCDHKTQQPNNLKTHIAFRHSKVKPFSCTYCHYRSSQSSNVKRHVRLKHSLELSAPVFRTYTAIQTAAHTDECSGSGTQIKTEMATPSQDDVYLLGENEMNVSRSVDSNLLLERCGWVHDGTLRKKLQVGAIDSEKANWSDLKDVFTDVFYQEGEPLGVTGKTRHEIVLSSDCTVYVKERRYPQALKTAMREELQKMIDQGIIVPSKSTYNSPLWGEPTAGSPGKYRVVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00757799;
90% Identity: iTF_00757799;
80% Identity: iTF_00757799;