Basic Information

Insect: Gonocerus acuteangulatus
Gene Symbol: -
Assembly: GCA_946811585.1
Location: CAMPFD010005526.1:7840-15573[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0065 1.3 11.4 2.2 1 23 45 68 45 68 0.96

2 16 4.3e-05 0.0089 18.3 0.4 2 23 98 120 97 120 0.93

3 16 0.0084 1.8 11.0 0.2 1 23 126 149 126 149 0.95

4 16 0.015 3.1 10.2 0.1 1 20 155 174 155 175 0.96

5 16 0.1 21 7.6 0.2 2 23 202 224 201 224 0.96

6 16 0.39 82 5.8 0.5 1 23 230 253 230 253 0.92

7 16 0.00019 0.039 16.2 1.4 1 23 259 282 259 282 0.96

8 16 0.00012 0.024 16.9 0.9 1 23 287 310 287 310 0.98

9 16 0.00053 0.11 14.8 1.9 1 23 316 339 316 339 0.94

10 16 0.023 4.7 9.7 0.3 2 23 346 368 345 368 0.92

11 16 0.00011 0.023 16.9 3.0 2 23 376 398 376 398 0.96

12 16 0.00017 0.035 16.4 3.7 1 23 404 427 404 427 0.97

13 16 2.2 4.5e+02 3.4 0.9 1 23 433 456 433 456 0.94

14 16 0.0011 0.23 13.8 0.6 1 23 464 487 464 487 0.98

15 16 0.00052 0.11 14.8 3.0 2 23 494 515 493 515 0.97

16 16 8.1 1.7e+03 1.6 0.8 1 20 521 540 521 544 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0065	1.3	11.4	2.2	1	23	45	68	45	68	0.96
2	16	4.3e-05	0.0089	18.3	0.4	2	23	98	120	97	120	0.93
3	16	0.0084	1.8	11.0	0.2	1	23	126	149	126	149	0.95
4	16	0.015	3.1	10.2	0.1	1	20	155	174	155	175	0.96
5	16	0.1	21	7.6	0.2	2	23	202	224	201	224	0.96
6	16	0.39	82	5.8	0.5	1	23	230	253	230	253	0.92
7	16	0.00019	0.039	16.2	1.4	1	23	259	282	259	282	0.96
8	16	0.00012	0.024	16.9	0.9	1	23	287	310	287	310	0.98
9	16	0.00053	0.11	14.8	1.9	1	23	316	339	316	339	0.94
10	16	0.023	4.7	9.7	0.3	2	23	346	368	345	368	0.92
11	16	0.00011	0.023	16.9	3.0	2	23	376	398	376	398	0.96
12	16	0.00017	0.035	16.4	3.7	1	23	404	427	404	427	0.97
13	16	2.2	4.5e+02	3.4	0.9	1	23	433	456	433	456	0.94
14	16	0.0011	0.23	13.8	0.6	1	23	464	487	464	487	0.98
15	16	0.00052	0.11	14.8	3.0	2	23	494	515	493	515	0.97
16	16	8.1	1.7e+03	1.6	0.8	1	20	521	540	521	544	0.91

Sequence Information

Coding Sequence: atggaCTTTATAGAATGCAGTGAGATGAACTTTATTGGTGATATCAGGACGTCGGAGATCAAAGATAGAATTGTTGAAGAGCTTCTGCACCGAGTTTCAGCTGACGATTTCTTTTCAACACCAGATACCATTTATGAGTGTTTCCACTGCGACCACAAGACTCCCGACTTGAGCAAGCTAAGAGTGCACGTCGAAGTACGGCATTTAAGTCTTGGAGGGTTTCCTTTGCCAGTTGTCCAATTGGACACAGTTCCGAGACGGAAGGCGCCACCCGGCAAACGATGGAGGAACAAGTGCTCTTTTTGCGGAGAGAGATTCGATCGGAGGTCCGACTTGCGTGAACATCTCGCTGAAGTTCATCGCGGGAAGTCTGCATTCCCTTGCGAGCTGTGCAGCTACGAAGCAGTAACAAGGGCTGACTTGAAGTCGCACATGATGTTTCGCCATACAAAGGACCAGCCTTATAAGTGTGGATATTGCTCGTACagttctgCTTCATCTGGCGCAGTCAGACGACATCTCTCTTGCATGCATCCAGATGAAGAAGTTAATATAATTGGCAAAAAAACTGCACCCGGTGTTCCTCAGGAGAAAAGGAATTTGAAATGCGAGCTTTGTGACTATGAGGCTAAGTTCCCCTCTGTCTTGAGCCAGCACGTCTTAACGAAACATTCAAAGATGCGACCGTTCTCCTGCAGTTATTGCTCGTTTCAAACATCCGGCAAAGGGCGCCTTGCAAACCATGTTCTCGCTCGACACACTGACGAACGACCTTACCGGTGTGCTGTCTGTGACAAGAGCTTCTTCGAGAAGAAGCGGCTCAAACGTCACGTCGAAGTTAAACACCTCCAGGTCAGGTTTACTTGCGAGCACTGTGGATTTGCTGCAGGCTACCGCGATAATCTCAGACGCCATATAATAACACGGCATACAAACGAGAGGAAGTACTCTTGCGACCATTGCTCTTATAAGTCTGCACAGTCTGGGAACCTCAAGCGACACGTACTCCTTAAGCACTCGCTGGAAAAACCTCTTAGCTGTAAAATTTGTTGGTATGTAACAGAAAATCCTGCGGTCTTAAAAAGGCACCATTTAGCAAAACATACTGAAGGGAAGGACATGCGTTATTGCCCACACTGTAGTTATTCCACTAACCGCAAAGCATACTTGAGGAAGCACATGCTTTCAAGGCACTGTAGCGACAAGCCACATAAGTGTCCTTTTTGTAACTACTCAACTTCTCTCAGCTATAATCTGAAAATGCACATCCGTTCGAAACATACTGATGAAAGACCATATTCCTGCAGTTTTTGCGATTTCCGTGCACCCTCTGTCCAGAAGGTAAAATATCACATTAATTCTAAACACACAGGAAAGACAAAATCGTCATACAACTGCAAAATATGTGATTTTGTAGCCGACATGAAGAAAACGCTAAATGAACACATCAGGACTAAACACAGCAAGAGGCGGTCAATCTCTTGTCCTCACTGCGATTTCGTTACCAAGAACAAGACTTCGTTCAGGACTCACGCAAAGACTCATGGCCTCGAGAATGGCTTCTCTTGCTCGTTTTGCCTCTTCTCGACTGAACGACCCAAAATACTCGAAAACCACATGTGGAGAAAGCACTCACACGAATATCTTGCTAGTCAAACGGATCAAAACGAAGAAAAGAAATTCAAGACAGATATCGCATCTGTCACCTCGAGTGAAACTCTACCTCAACAAACCGACGATTCCGGCAACTCAATGCTCGCAGATAAGAGCCCAGAAGGaaacaaaatagaaaacaataatgaaataactttAGAACCAGAAAAGTTCAAAACTCCCTTATGA
Protein Sequence: MDFIECSEMNFIGDIRTSEIKDRIVEELLHRVSADDFFSTPDTIYECFHCDHKTPDLSKLRVHVEVRHLSLGGFPLPVVQLDTVPRRKAPPGKRWRNKCSFCGERFDRRSDLREHLAEVHRGKSAFPCELCSYEAVTRADLKSHMMFRHTKDQPYKCGYCSYSSASSGAVRRHLSCMHPDEEVNIIGKKTAPGVPQEKRNLKCELCDYEAKFPSVLSQHVLTKHSKMRPFSCSYCSFQTSGKGRLANHVLARHTDERPYRCAVCDKSFFEKKRLKRHVEVKHLQVRFTCEHCGFAAGYRDNLRRHIITRHTNERKYSCDHCSYKSAQSGNLKRHVLLKHSLEKPLSCKICWYVTENPAVLKRHHLAKHTEGKDMRYCPHCSYSTNRKAYLRKHMLSRHCSDKPHKCPFCNYSTSLSYNLKMHIRSKHTDERPYSCSFCDFRAPSVQKVKYHINSKHTGKTKSSYNCKICDFVADMKKTLNEHIRTKHSKRRSISCPHCDFVTKNKTSFRTHAKTHGLENGFSCSFCLFSTERPKILENHMWRKHSHEYLASQTDQNEEKKFKTDIASVTSSETLPQQTDDSGNSMLADKSPEGNKIENNNEITLEPEKFKTPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -