Basic Information

Insect: Gonocerus acuteangulatus
Gene Symbol: -
Assembly: GCA_946811585.1
Location: CAMPFD010000784.1:537672-547315[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 3.6e-05 0.0074 18.5 0.8 2 23 2 24 1 24 0.93

2 7 0.00011 0.024 16.9 3.6 3 22 101 120 99 124 0.92

3 7 4.2e-06 0.00087 21.4 0.3 1 23 127 149 127 149 0.98

4 7 1.6e-07 3.3e-05 25.9 0.5 1 23 155 178 155 178 0.97

5 7 2.3e-07 4.8e-05 25.4 0.8 1 23 184 206 184 206 0.99

6 7 9.6e-06 0.002 20.3 1.4 1 23 212 234 212 234 0.98

7 7 4.9e-06 0.001 21.2 2.6 1 23 240 262 240 262 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	3.6e-05	0.0074	18.5	0.8	2	23	2	24	1	24	0.93
2	7	0.00011	0.024	16.9	3.6	3	22	101	120	99	124	0.92
3	7	4.2e-06	0.00087	21.4	0.3	1	23	127	149	127	149	0.98
4	7	1.6e-07	3.3e-05	25.9	0.5	1	23	155	178	155	178	0.97
5	7	2.3e-07	4.8e-05	25.4	0.8	1	23	184	206	184	206	0.99
6	7	9.6e-06	0.002	20.3	1.4	1	23	212	234	212	234	0.98
7	7	4.9e-06	0.001	21.2	2.6	1	23	240	262	240	262	0.98

Sequence Information

Coding Sequence: ATGTCTTGTGCCCTTTGTGATCGACATTTCAAACGCCAAAAAGCTCTTGAAACACATATGGCTTTAGCACATCCACAAATTGAGGAGTTTTCAGAGCCAGAAGATTTAATGGAAGGTATAAGACATGTTGTAAATATTCAAACGGAAGCTGCTGAAGAAGATAAAATGCGCTCTTGGAGGTACAATGATGACTTTCCTTCTGATATATGCTCTTCAGAGACTGACAAAACTGGAGATGCTGCTGATAACAGCGACTTTCCAGATGAAGATAaggggaaaaagaaaaaaagagtgGTTCACTGTCCTCATTGCTCACGGACATTCACTCATCGTAGCTCTCTTCTGTATCATGTTCGATCTTATTCTGGACATCGCCTTCATCAGTGTGATGTATGCGGAAAAGGTTTCTTTGCTGCAAACGCTTTAAGAgTGCACATGAGGATGCATTCTGGTGTTAAACCTTATAAGTGTGAAGTTTGTGGACGTAACTTCAGGCAGTGGGGAGACTTAAAATACCACATGACATCGCTTCATTCCAATACAAAGCAGTTTCAGTGTGAGTTTTGTGGAAAAGACTTTGCAAGAAAATATTCCCTCATAATTCATCGCCGAATTCATACTGGTGAAAAGAACTATGTTTGTGAATTTTGTCGTAAAACTTTCAGAGCTTCATCTTATCTTGTCAATCACAGAAGAATTCATACAGGTGAAAAGCCTTACAATTGTGATGTATGTCATAAACCATTCCGAGTAAAATCTGACATGAAGAGGCATAGAAACATTCATAATAAAGTGAATGGGGGAAATGCTGTTCCTCGCAATAATGAAACATCAGCACCAGCTACTTCTGATCCATTAAATGTCAGGACAACTGATGAGTTTCGCCAGACTACAGATCCTAATACTCTCTATGTTTGGCTTCCAGCATCGACTGAGGAAACTATTGAAGAATCTATTTTACcagattaa
Protein Sequence: MSCALCDRHFKRQKALETHMALAHPQIEEFSEPEDLMEGIRHVVNIQTEAAEEDKMRSWRYNDDFPSDICSSETDKTGDAADNSDFPDEDKGKKKKRVVHCPHCSRTFTHRSSLLYHVRSYSGHRLHQCDVCGKGFFAANALRVHMRMHSGVKPYKCEVCGRNFRQWGDLKYHMTSLHSNTKQFQCEFCGKDFARKYSLIIHRRIHTGEKNYVCEFCRKTFRASSYLVNHRRIHTGEKPYNCDVCHKPFRVKSDMKRHRNIHNKVNGGNAVPRNNETSAPATSDPLNVRTTDEFRQTTDPNTLYVWLPASTEETIEESILPD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -